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GPA33 (glycoprotein A33 (transmembrane))

Identity

Other namesA33
MGC129986
MGC129987
HGNC (Hugo) GPA33
LocusID (NCBI) 10223
Location 1q24.1
Location_base_pair Starts at 167022082 and ends at 167059868 bp from pter ( according to hg19-Feb_2009)  [Mapping]
 
Note Location of GPA33 on human chromosome 1q24 showing flanking genes to demonstrate synteny to other vertebrates, such as mouse (chromosome 1) and zebrafish (chromosomes 1 and 9). Note that an evolutionary duplication event of the entire zebrafish genome has resulted in the two copies of gpa33 in zebrafish.

DNA/RNA

 
  Genomic organization of the GPA33 gene. Coding exonic sequences appear in red, non-coding exonic sequences are in blue and intronic sequence are in yellow, with the corresponding exon and intron sizes given below in base pairs (bp). The exon numbers are indicated above each exon. Note the GPA33 gene is in on the reverse strand.
Description The human GPA33 gene comprises 7 exons (all coding) spanning 37,787 bp of genomic DNA.
Transcription 2,793 bp mRNA; 960 bp open reading frame (Heath et al., 1997).

Protein

 
  Schematic representation of the GPA33 protein, indicating the position of the Ig-like V-type and Ig-like C2-type domain in the extracellular region and the polycysteine residue ('CCCC' motif).
Description 319 amino acids; 43 kDa protein. The A33 glycoprotein is a member of the immunoglobulin superfamily and contains three distinct structural domains: a 213 amino acid extracellular region containing two immunoglobulin-like domains (a C2-type domain and a v-type domain), a 23 amino acid hydrophobic transmembrane domain, and a 62 amino acid highly polar intracellular tail containing four consecutive cysteine residues (Heath et al., 1997). Post translational modification includes N-glycosylation (containing approximately 8 kDa of N-linked carbohydrate), and S-palmitoylation. The S-palmitoylation may be involved in regulating the internalization process initiated by binding of the monoclonal antibody A33 to the A33 antigen. There is no evidence of O-glycosylation, sialylation or glycophosphatidylinositol (Ritter et al., 1997).
Expression GPA33 demonstrates a rare tissue-specific expression pattern. GPA33 is a cell surface differentiation antigen that is constitutively expressed on the basolateral surfaces of normal human and mouse colon and small bowel epithelium. GPA33 is homogeneously expressed in over 95% of both human primary and metastatic colon cancers, and in 55% of gastric carcinomas, although absent in normal stomach epithelium (Welt et al., 1990).
Localisation Membrane; single-pass type 1 membrane protein.
Function Unknown; the protein structure is consistent with a putative role of GPA33 in cell-cell recognition and signaling (Heath et al., 1997). A33 may play a role in relaying information between intestinal epithelial cells and the gut immune system (Lee et al., 2007).
Homology The two Ig-like domains are well conserved between humans, chimpanzee, dog, mouse and rat, whereas chicken and zebrafish retain only the Ig-like V-like domain. The overall GPA33 protein similarity between humans and various species are: chimpanzee (Pan troglodytes) 97%, domestic dog (Canis lupus familiaris) 75%, mouse (Mus musculus) 66%, rat (Rattus norvegicus) 68%, domestic chicken (Gallus gallus) 44%, and zebrafish (Danio rerio) 35%.

Implicated in

Entity Colorectal cancer
Note Colorectal cancer marker.
Although the biochemical, immunological and molecular biology of the A33 antigen has been extensively characterized, the function of the molecule remains unknown. The antigen has several identified properties that contribute to a potential therapeutic target for colon cancer. The A33 antigen is expressed homogenously and at high levels in colorectal carcinomas, there are a high number of A33 binding sites per cell and it is not shed or secreted into the blood stream (Welt et al., 1990). In addition, upon mAB binding to the A33 antigen, the antibody-antigen complex is internalized and sequestered in vesicles (Daghighian et al., 1996).
Selective immunological targeting of tumors with monoclonal antibodies (mAb) is an important therapeutic approach in cancer therapy. Clinical imaging and biopsy-based biodistribution studies using radiolabeled murine mAb A33 demonstrated specific targeting to antigen-positive tumor tissues in 95% of colorectal patients with tumor retention for up to six weeks (Welt et al., 1990; Welt et al., 1994). The only normal tissue reported to accumulate the radioisotope was the bowel, with clearance from the normal gastrointestinal tract within one week. Phase I and II therapy trials using 125I- and 131I-labeled murine A33 mAb were shown to have antitumor effects without bowel toxicity, however human anti-mouse antibody development in all patients prevented repeated dosing and led to the development of humanized mAb A33 (huA33). Phase I clinical trials using multiple dose schedules of 125I- and 131I-labled huA33 mAb in patients with colorectal carcinoma have been conducted and have shown safety and possible efficacy, with future trials proposed (Chong et al., 2005; Scott et al., 2005).
  

External links

Nomenclature
HGNC (Hugo)GPA33   4445
Entrez_Gene (NCBI)GPA33  10223  glycoprotein A33 (transmembrane)
Cards
AtlasGPA33ID40735ch1q23
GeneCards (Weizmann)GPA33
Ensembl (Hinxton)ENSG00000143167 [Gene_View]  chr1:167022082-167059868 [Contig_View]  GPA33 [Vega]
AceView (NCBI)GPA33
Genatlas (Paris)GPA33
SOURCE (Stanford)NM_005814
Genomic and cartography
GoldenPath (UCSC)GPA33  -  1q24.1   chr1:167022082-167059868 -  1q24.1   [Description]    (hg19-Feb_2009)
EnsemblGPA33 - 1q24.1 [CytoView]
Mapping of homologs : NCBIGPA33 [Mapview]
OMIM602171   
Gene and transcription
Genbank (Entrez)AK312833 BC069705 BC069723 BC069745 BC069761
RefSeq transcript (SRS)NM_005814
RefSeq transcript (Entrez)NM_005814
RefSeq genomic (SRS)AC_000133 NC_000001 NC_018912 NT_004487 NW_001838532 NW_004077999
RefSeq genomic (Entrez)AC_000133 NC_000001 NC_018912 NT_004487 NW_001838532 NW_004077999
Consensus coding sequences : CCDS (NCBI)GPA33
Cluster EST : UnigeneHs.651244 [ SRS ] Hs.651244 [ NCBI ]
CGAP (NCI)Hs.651244
Alternative Splicing : Fast-db (Paris)GSHG0002707
Alternative Splicing GalleryENSG00000143167
Gene ExpressionGPA33 [ NCBI-GEO ]   GPA33 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ99795 (SRS) Q99795 (Uniprot)
NextProtQ99795
With graphics : InterProQ99795
Splice isoforms : SwissVarQ99795(Swissvar)
Domaine pattern : Prosite (SRS)IG_LIKE (PS50835)   
Domaine pattern : Prosite (Expaxy)IG_LIKE (PS50835)   
Domains : Interpro (SRS)Ig-like    Ig-like_fold    Ig_sub2    Ig_V-set    Ig_V-set_subgr   
Domains : Interpro (EBI)Ig-like    Ig-like_fold    Ig_sub2    Ig_V-set    Ig_V-set_subgr   
Related proteins : CluSTrQ99795
Domain families : Pfam (SRS)V-set (PF07686)   
Domain families : Pfam (Sanger)V-set (PF07686)   
Domain families : Pfam (NCBI)pfam07686   
Domain families : Smart (EMBL)IGc2 (SM00408)  IGv (SM00406)  
DMDM10223
Blocks (Seattle)Q99795
Human Protein AtlasENSG00000143167
HPRD03704
IPIIPI00293853   IPI00984027   
Protein Interaction databases
DIP (DOE-UCLA)Q99795
IntAct (EBI)Q99795
FunCoupENSG00000143167
REACTOMEGPA33
Protein Interaction Database10223
BioGRIDGPA33
InParanoidQ99795
Interologous Interaction database Q99795
IntegromeDBGPA33
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)GPA33
SNP (GeneSNP Utah)GPA33
SNP : HGBaseGPA33
Genetic variants : HAPMAPGPA33
Somatic Mutations in Cancer : COSMICGPA33 
CONAN: Copy Number AnalysisGPA33 
Mutations and Diseases : HGMDGPA33
OMIM602171   
GENETests602171   
Disease Genetic AssociationGPA33
Huge Navigator GPA33 [HugePedia]  GPA33 [HugeCancerGEM]
Genomic VariantsGPA33  GPA33 [DGVbeta]
snp3D : Map Gene to Disease10223
General knowledge
Homologs : HomoloGeneGPA33
Homology/Alignments : Family Browser (UCSC)GPA33
Phylogenetic Trees/Animal Genes : TreeFamGPA33
Chemical/Protein Interactions : CTD10223
Chemical/Pharm GKB GenePA28826
Clinical trialGPA33
Cancer Resource (Charite)ENSG00000143167
Ontology : AmiGOreceptor activity  integral to plasma membrane  
Ontology : EGO-EBIreceptor activity  integral to plasma membrane  
Other databases
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
PubGeneGPA33
iHOPGPA33

Bibliography

Quantitative analysis of antibody localization in human metastatic colon cancer: a phase I study of monoclonal antibody A33.
Welt S, Divigi CR, Real FX, Yeh SD, Garin-Chesa P, Finstad CL, Sakamoto J, Choen A, Sigurdson ER, Kemeny N, Carswell EA, Oettgen HF, Old LJ.
J Clin Oncol 1990; 8(11): 1894-1906.
PMID 2230877
 
Phase I/II study of iodine 131-labeled monoclonal antibody A33 in patients with advanced colon cancer.
Welt S, Divgi CR, Kemeny N, Finn RD, Scott AM, Graham M, Germain JS, Richards EC, Larson SM, Oettgen HF, Old LJ.
J Clin Oncol 1994; 12(8): 1561-1571.
PMID 8040668
 
Enhancement of radiation dose to the nucleus by vesicular internalization of iodine-125-labeled A33 monoclonal antibody.
Daghighian F, Barendswaard E, Welt S, Humm J, Scott A, Willingham MC, McGuffie E, Old LJ, Larson SM.
J Nucl Med. 1996; 37(6): 1052-1057.
PMID 8683300
 
The human A33 antigen is a transmembrane glycoprotein and a novel member of the immunoglobulin superfamily.
Heath JK, White SJ, Johnstone CN, Catimel B, Simpson RJ, Moritz RL, Tu GF, Ji H, Whitehead RH, Groenen LC, Scott AM, Ritter G, Cohen L, Welt S, Old LJ, Nice EC, Burgess AW.
Proc Natl Acad Sci USA 1997; 94(2): 469-474.
PMID 9012807
 
Characterization of posttranslational modifications of human A33 antigen, a novel palmitoylated surface glycoprotein of human gastrointestinal epithelium.
Ritter G, Cohen LS, Nice EC, Catimel B, Burgess AW, Moritz RL, Ji H, Heath JK, White SJ, Welt S, Old LJ, Simpson RJ.
Biochem Biophys Res Commun. 1997; 236(3): 682-686.
PMID 9245713
 
Phase I trial of 131I-huA33 in patients with advanced colorectal carcinoma.
Chong G, Lee FT, Hopkins W, Tebbutt N, Cebon JS, Mountain AJ, Chappell B, Papenfuss A, Schleyer P, U P, Murphy R, Wirth V, Smyth FE, Potasz N, Poon A, Davis ID, Saunder T, O'keefe GJ, Burgess AW, Hoffman EW, Old LJ, Scott AM.
Clin Cancer Res. 2005; 11(13): 4818-4826.
PMID 16000579
 
A phase I trial of humanized monoclonal antibody A33 in patients with colorectal carcinoma: biodistribution, pharmacokinetics, and quantitative tumor uptake.
Scott AM, Lee FT, Jones R, Hopkins W, MacGregor D, Cebon JS, Hannah A, Chong G, U P, Papenfuss A, Rigopoulos A, Sturrock S, Murphy R, Wirth V, Murone C, Smyth FE, Knight S, Welt S, Ritter G, Richards E, Nice EC, Burgess AW, Old LJ.
Clin Cancer Res. 2005; 11(13): 4810-4817.
PMID 16000578
 
Peripheral antigen display by lymph node stroma promotes T cell tolerance to intestinal self.
Lee JW, Epardaud M, Sun J, Becker JE, Cheng AC, Yonekura AR, Heath JK, Turley SJ.
Nat Immunol. 2007; 8(2): 181-190.
PMID 17195844
 
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Contributor(s)

Written06-2008Tania Tabone, Joan K Heath
Ludwig Institute for Cancer Research, Melbourne Branch, PO Box 2008, Royal Melbourne Hospital, Parkville, VIC 3050, Australia

Citation

This paper should be referenced as such :
Tabone T, Heath JK . GPA33 (glycoprotein A33 (transmembrane)). Atlas Genet Cytogenet Oncol Haematol. June 2008 .
URL : http://AtlasGeneticsOncology.org/Genes/GPA33ID40735ch1q23.html

This paper is referenced by INIST as such :
http://documents.irevues.inist.fr/bitstream/2042/44469/1/06-2008-GPA33ID40735ch1q23.pdf   [ Bibliographic record ]

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indexed on : Wed May 1 12:55:14 CEST 2013

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