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ICAM1 (intercellular adhesion molecule 1 (CD54), human rhinovirus receptor)

Identity

Other namesBB2
CD54
ICAM-1
P3.58
HGNC (Hugo) ICAM1
Location 19p13.2
Location_base_pair Starts at 10242517 and ends at 10258291 bp from pter ( according to hg18-Mar_2006)  [Mapping]

DNA/RNA

Description ICAM1 gene maps on chromosome 19p13.3-p13.2 scanning 15512 bp.
Transcription 7 exon; mRNA 3249 bp.

Protein

Description A transmembrane glycoprotein of 532 amino acids, which has a molecular mass ranging from 75 to 115 kDa. ICAM-1 is a member of the immunoglobulin supergenge family, and contains five extracellular immunoglobulin-like domains.
Expression ICAM-1 is expressed on various cells of both hematopoietic and non-hematopoietic cells, including endothelial cells, leukocytes other than basophilic granulocytes, T cells, B cells, fibroblasts, and cancer cells.
Function ICAM-1, a member of adhesion molecules, binds to two integrins belonging to the beta2 subfamily CD11a/CD18 (LFA-1) and CD11b/CD18 (Mac-1) on the surface of leukocytes. ICAM1 is a key molecule in immune-mediated and inflammatory processes and function as a co-stimulatory signal which is important for the trans-endothelial migration of leukocytes and the activation of T cells. ICAM-1 can be induced under inflammatory condition by TNF-alpha in a process that involves IKK-beta. ICAM1 on target cells leads to recruitment of the MHC-I proteins to the contact area and enhances presentation of cognate peptide MHC-I complex to cytotoxic T cells. ICAM-1 interacts with important factors involved in many kinds of human cancers. ICAM-1 is involved in transmembrane signal transduction in the regulatory process of cell proliferation through the mitogen-activated protein kinase (MAPK) pathway and eventually the AP-1 pathway (Springer, 1990; Dustin et al., 1998; Simmons et al., 1988; Caras et al., 1987; Rothlein et al., 1986; Dustin et al., 1986; Tsujisaki et al., 1991; Gardiner et D'Souza, 1999).

Implicated in

Entity Melanoma
Disease ICAM-1 expresses with a dose- and time-dependent increase in human malignant melanoma cells on stimulation of TNF-alpha. Inhibition of ICAM-1 expression on melanoma cells reduces the metastatic ability of the melanoma cells, indicating an important role of ICAM-1 in metastasis (Miele et al., 1994).
  
Entity Hepatocellular carcinoma
Disease Serum concentration of ICAM-1 (sICAM-1) in patients with hepatocellular carcinoma is a marker for disease progression and prognosis. Higher sICAM-1 levels are more frequently observed in those patients with multiple lesions and intra-hepatic metastasis (Mei et al., 2000).
  
Entity Prostate cancer
Disease Two polymorphisms and a common haplotype within the ICAM-1 gene cluster were correlated with prostate cancer risk among men with family history of the disease (Chen et al., 2006).
  
Entity Colon cancer
Disease ICAM-1 expression is decreased in colorectal cancer (Berndt et al., 2008).
  
Entity Gastric cancer
Disease Decreased ICAM expression leads to lymph node metastasis, suggesting that ICAM-1 gene transfection can inhibit lymph node metastasis (Tanaka et al., 2002; Yashiro et al., 2005).
  
Entity Head and neck cancer
Disease sICAM-1 shows a significant elevation in the sera of patients with nasopharyngeal carcinoma compared to healthy controls (Liu et al., 1999).
  
Entity Leukemia
Disease A high expression of ICAM-1 may identify high-risk MDS (Graf et al., 2005).
  
Entity Breast Cancer
Disease ICAM-1 down-regulation at the mRNA and protein levels led to a suppression of breast cells invasion (Rosette et al., 2005).
  

External links

Nomenclature
HGNC (Hugo)ICAM1   5344
Entrez_Gene (NCBI)ICAM1  3383  intercellular adhesion molecule 1
Cards
AtlasICAM1ID40909ch19p13
GeneCards (Weizmann)ICAM1
Ensembl (Hinxton)ENSG00000090339 [Gene_View]  ICAM1 [Vega]
AceView (NCBI)ICAM1
Genatlas (Paris)ICAM1
euGene (Indiana)3383
SOURCE (Stanford)NM_000201
Gene Expression (Array Express) ENSG00000090339
Genomic and cartography
GoldenPath (UCSC)ICAM1  -  19p13.2   chr19:10242517-10258291 +  19p13.3-p13.2   [Description]    (hg18-Mar_2006)
EnsemblICAM1 - 19p13.3-p13.2 [CytoView]
Mapping of homologs : NCBIICAM1 [Mapview]
OMIM147840   248310   611162   
Gene and transcription
Gene : Genbank (Entrez)AF340038 AF340039 AK130659 AK298054 AK298983
Reference sequence (RefSeq transcript) :SRSNM_000201
Reference transcript : EntrezNM_000201
RefSeq genomic : SRSAC_000062 AC_000151 NC_000019 NG_012083 NT_011295 NW_001838483 NW_927195
RefSeq genomic : EntrezAC_000062 AC_000151 NC_000019 NG_012083 NT_011295 NW_001838483 NW_927195
Consensus coding sequences : CCDS NCBIICAM1
Cluster EST : UnigeneHs.643447 [ SRS ] Hs.643447 [ NCBI ]
Alternative Splicing : Fast-db (Paris)6038
Protein : pattern, domain, 3D structure
Protein : UniProt/SwissProtP05362 (SRS) P05362 (Expasy) P05362 (Uniprot)
With graphics : InterProP05362
Splice isoforms : VarSplice FASTAP05362(VarSplice FASTA)
Domaine pattern : Prosite (SRS)IG_LIKE (PS50835)   
Domain pattern : Prosite (Expaxy)IG_LIKE (PS50835)   
Domains : Interpro (SRS)ICAM    ICAM_N    ICAM_VCAM_N    Ig-like_fold    Ig_sub   
Domains : Interpro (EBI)ICAM    ICAM_N    ICAM_VCAM_N    Ig-like_fold    Ig_sub   
Related proteins : CluSTrP05362
Domain families : Pfam SRSICAM_N (PF03921)   
Domain families : Pfam SangerICAM_N (PF03921)   
Domain families : Pfam NCBIpfam03921   
Domain families : Smart EMBLIG (SM00409)  
Blocks (Seattle)P05362
Crystal structure of protein : PDB SRS1D3E    1D3I    1D3L    1IAM    1IC1    1IJ4    1MQ8    1P53    1Z7Z    2OZ4   
Crystal structure of protein : PDBSum1D3E    1D3I    1D3L    1IAM    1IC1    1IJ4    1MQ8    1P53    1Z7Z    2OZ4   
Crystal structure of protein : IMB1D3E    1D3I    1D3L    1IAM    1IC1    1IJ4    1MQ8    1P53    1Z7Z    2OZ4   
Crystal structure of protein : PDB RSDB1D3E    1D3I    1D3L    1IAM    1IC1    1IJ4    1MQ8    1P53    1Z7Z    2OZ4   
HPRD00996
Protein Interaction databases
DIP (DOE-UCLA)P05362
IntAct (EBI)P05362
Polymorphism : SNP, mutations, diseases
Single Nucleotide Polymorphism (SNP) : dbSNP NCBIICAM1
SNP : GeneSNP UtahICAM1
SNP : HGBaseICAM1
Genetic variants : HAPMAPICAM1
Somatic Mutations in Cancer : COSMICICAM1 
Mutations and Diseases : HGMDICAM1
Hereditary diseases : OMIM147840    248310    611162   
Hereditary diseases : GENETests147840    248310    611162   
Diseases : Genetic AssociationICAM1
General knowledge
Homologs : HomoloGeneICAM1
Homology/Alignments : Family Browser UCSCICAM1
Phylogenetic Trees/Animal Genes : TreeFamICAM1
Chemical/Protein Interactions : CTD3383
Keywords Ontology : AmiGOimmunological synapse  regulation of leukocyte mediated cytotoxicity  T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell  T cell antigen processing and presentation  positive regulation of cellular extravasation  transmembrane receptor activity  integrin binding  protein binding  extracellular space  cytoplasm  plasma membrane  plasma membrane  integral to plasma membrane  heterophilic cell adhesion  leukocyte adhesion  leukocyte adhesion  external side of plasma membrane  membrane to membrane docking  regulation of cell adhesion  cell adhesion mediated by integrin  interspecies interaction between organisms  positive regulation of nitric oxide biosynthetic process  virion attachment, binding of host cell surface receptor  leukocyte migration  positive regulation of NF-kappaB transcription factor activity  adhesion to symbiont  
Keywords Ontology : EGO-EBIimmunological synapse  regulation of leukocyte mediated cytotoxicity  T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell  T cell antigen processing and presentation  positive regulation of cellular extravasation  transmembrane receptor activity  integrin binding  protein binding  extracellular space  cytoplasm  plasma membrane  plasma membrane  integral to plasma membrane  heterophilic cell adhesion  leukocyte adhesion  leukocyte adhesion  external side of plasma membrane  membrane to membrane docking  regulation of cell adhesion  cell adhesion mediated by integrin  interspecies interaction between organisms  positive regulation of nitric oxide biosynthetic process  virion attachment, binding of host cell surface receptor  leukocyte migration  positive regulation of NF-kappaB transcription factor activity  adhesion to symbiont  
Pathways : BIOCARTACells and Molecules involved in local acute inflammatory response [Genes]    B Lymphocyte Cell Surface Molecules [Genes]    CTL mediated immune response against target cells [Genes]    Adhesion and Diapedesis of Granulocytes [Genes]    Adhesion and Diapedesis of Lymphocytes [Genes]    Adhesion Molecules on Lymphocyte [Genes]    Monocyte and its Surface Molecules [Genes]    Neutrophil and Its Surface Molecules [Genes]    T Cytotoxic Cell Surface Molecules [Genes]    T Helper Cell Surface Molecules [Genes]   
Pathways : KEGGCell adhesion molecules (CAMs)Natural killer cell mediated cytotoxicityLeukocyte transendothelial migration
Other databases
Probes
Probes : ImagenesICAM1 Related clones (RZPD - Berlin)
Literature
PubMed499 Pubmed reference(s) in Entrez
PubGeneICAM1

Bibliography

Induction by IL 1 and interferon-gamma: tissue distribution, biochemistry, and function of a natural adherence molecule (ICAM-1).
Dustin ML, Rothlein R, Bhan AK, Dinarello CA, Springer TA.
J Immunol. 1986 Jul 1;137(1):245-54.
PMID 3086451
 
A human intercellular adhesion molecule (ICAM-1) distinct from LFA-1.
Rothlein R, Dustin ML, Marlin SD, Springer TA.
J Immunol. 1986 Aug 15;137(4):1270-4.
PMID 3525675
 
Cloning of decay-accelerating factor suggests novel use of splicing to generate two proteins.
Caras IW, Davitz MA, Rhee L, Weddell G, Martin DW Jr, Nussenzweig V.
Nature. 1987 Feb 5-11;325(6104):545-9.
PMID 2433596
 
Supergene families meet in the immune system.
Dustin ML, Staunton DE, Springer TA.
Immunol Today. 1988 Jul-Aug;9(7-8):213-5.
PMID 3076418
 
ICAM, an adhesion ligand of LFA-1, is homologous to the neural cell adhesion molecule NCAM.
Simmons D, Makgoba MW, Seed B.
Nature. 1988 Feb 18;331(6157):624-7.
PMID 3340213
 
Adhesion receptors of the immune system.
Springer TA.
Nature. 1990 Aug 2;346(6283):425-34.
PMID 1974032
 
Detection of circulating intercellular adhesion molecule-1 antigen in malignant diseases.
Tsujisaki M, Imai K, Hirata H, Hanzawa Y, Masuya J, Nakano T, Sugiyama T, Matsui M, Hinoda Y, Yachi A.
Clin Exp Immunol. 1991 Jul;85(1):3-8.
PMID 1712683
 
Enhanced metastatic ability of TNF-alpha-treated malignant melanoma cells is reduced by intercellular adhesion molecule-1 (ICAM-1, CD54) antisense oligonucleotides.
Miele ME, Bennett CF, Miller BE, Welch DR.
Exp Cell Res. 1994 Sep;214(1):231-41.
PMID 7915992
 
Sequences within fibrinogen and intercellular adhesion molecule-1 (ICAM-1) modulate signals required for mitogenesis.
Gardiner EE, D'Souza SE.
J Biol Chem. 1999 Apr 23;274(17):11930-6.
PMID 10207014
 
Circulating intercellular adhesion molecule 1 (ICAM-1), E-selectin and vascular cell adhesion molecule 1 (VCAM-1) in head and neck cancer.
Liu CM, Sheen TS, Ko JY, Shun CT.
Br J Cancer. 1999 Jan;79(2):360-2.
PMID 9888481
 
Clinical significance of serum intercellular adhesion molecule-1 detection in patients with hepatocellular carcinoma.
Mei MH, Xu J, Shi QF, Yang JH, Chen Q, Qin LL.
World J Gastroenterol. 2000 Jun;6(3):408-410.
PMID 11819611
 
Lipid-mediated gene transfection of intercellular adhesion molecule-1 suppresses the peritoneal metastasis of gastric carcinoma.
Tanaka H, Yashiro M, Sunami T, Ohira M, Hirakawa-Y S Chung K.
Int J Mol Med. 2002 Nov;10(5):613-7.
PMID 12373302
 
High expression of costimulatory molecules correlates with low relapse-free survival probability in acute myeloid leukemia (AML).
Graf M, Reif S, Hecht K, Pelka-Fleischer R, Kroell T, Pfister K, Schmetzer H.
Ann Hematol. 2005 May;84(5):287-97. Epub 2004 Dec 7.
PMID 15592672
 
Role of ICAM1 in invasion of human breast cancer cells.
Rosette C, Roth RB, Oeth P, Braun A, Kammerer S, Ekblom J, Denissenko MF.
Carcinogenesis. 2005 May;26(5):943-50. Epub 2005 Mar 17.
PMID 15774488
 
CD54 expression is predictive for lymphatic spread in human gastric carcinoma.
Yashiro M, Sunami T, Hirakawa K.
Dig Dis Sci. 2005 Dec;50(12):2224-30.
PMID 16416166
 
ICAM gene cluster SNPs and prostate cancer risk in African Americans.
Chen H, Hernandez W, Shriver MD, Ahaghotu CA, Kittles RA.
Hum Genet. 2006 Aug;120(1):69-76. Epub 2006 May 30.
PMID 16733712
 
Systematic high-content proteomic analysis reveals substantial immunologic changes in colorectal cancer.
Berndt U, Philipsen L, Bartsch S, Wiedenmann B, Baumgart DC, Hammerle M, Sturm A.
Cancer Res. 2008 Feb 1;68(3):880-8.
PMID 18245490
 
REVIEW articlesautomatic search in PubMed
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Contributor(s)

Written07-2008Masakazu Yashiro
The Department of Surgical Oncology, Osaka City University Graduate School of Medicine, 1-4-3 Asahimachi, Abeno-ku, Osaka 545-8585, Japan

Citation

This paper should be referenced as such :
Yashiro M . ICAM1 (intercellular adhesion molecule 1 (CD54), human rhinovirus receptor). Atlas Genet Cytogenet Oncol Haematol. July 2008 .
URL : http://AtlasGeneticsOncology.org/Genes/ICAM1ID40909ch19p13.html

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indexed on : Sat Feb 27 10:54:51 CET 2010

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