Atlas of Genetics and Cytogenetics in Oncology and Haematology


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IL6 (interleukin 6 (interferon beta 2))

Identity

Other namesinterleukin 6
interferon beta 2
IL-6
HSF
HGF
CDF
BSF2
IFNB2
Hugo IL6
Location 7p15.3
Local_order cen. - - LOC221838 - IL6 - TOMM7 - DRCTNNB1A - tel. IMAGE

DNA/RNA

 
  The gene for IL6 is shown in light blue and comprizes 6 exons (with 375 bp, 103 bp, 191 bp, 114 bp, 147 bp and 542 bp in length) and 5 introns (with 920 bp, 162 bp, 1058 bp, 707 bp and 1745 bp in length). The coding part is shown in dark blue.
Description 6 exons.
Transcription 1472 bp transcript with a 639 bp of coding sequence.

Protein

 
  The IL6 protein (shown in light green) shares C-terminal a homologous region (shown in dark green) also found in IL23A and CSF3.
Description 212 amino acids, 23.7 kd, containing 4 alpha-helices.
Homology IL6 shares sequence homology with IL23 (IL23A) and G-CSF (CSF3).

Mutations

Note G/C polymorphism at nucleotide -174 (promoter region)
Breast cancer prognosis differs between populations. Despite its lower incidence in Blacks when compared to Caucasians, mortality among the former is higher. Genetic factors involved in the molecular pathways regulating tumor development have been adduced to explain these differences, and it has been suggested that the IL-6 gene is a susceptibility factor underlying ethnic differences in breast cancer survival. Reports of a G/C polymorphism at nucleotide -174 within the promoter region of the IL-6 gene support this contention. This polymorphism modulates IL-6 expression and allele/genotype frequencies at the -174 site differ significantly between ethnic groups.

Implicated in

Entity Various cancers
Note Although IL6 necessary to support growth of multiple myeloma cells, and is upregulated in certain tumor types, notably lung (squamous), bladder and prostate carcinomas, no recurrent chromosome rearrangements at 7p21 or IL6 rearrangements have been observed in these neoplasms.
  
Entity Breast cancer
Cytogenetics No rearrangements reported.
Oncogenesis Some cytokines, including IL-6, stimulate breast cancer proliferation or invasion and serve as negative prognostic indicators. Hitherto IL-2, IFNalpha, IFNbeta IFNgamma, IL-6, IL-12 have been used for anti tumour treatment of advanced breast cancer either to induce or increase hormone sensitivity and/or to stimulate cellular immunity. Cytokines, such as IL-6 play a key role in regulating estrogen synthesis in normal and malignant breast tissues. The activities of estradiol 17beta-hydroxysteroid dehydrogenase and estrone sulfatase are all increased by IL-6. Prostaglandin E2 may also be an important regulator of estradiol activity in breast tumors while invading macrophages and lymphocytes may also stimulate estrogen synthesis in breast cancers.
  
Entity Multiple myeloma
Cytogenetics No rearrangements reported.
Oncogenesis Although interleukin-6 (IL-6) is considered as a key growth factor for myeloma cells, only a few subpopulations of tumor cells, such as CD45(+) immature cells, proliferate in response to IL-6. However, increasing numbers of cytokines, chemokines and cell-to-cell contacts been support growth of MM cells. It has repeatedly shown that oncogenic mutations as well as the bone marrow matrix (BMM) stimulate IL-6-independent signalling pathways that protect MM cells from apoptosis.Hyperdiploid MM tumors contain multiple trisomies involving chromosomes 3, 5, 7, 9, 11, 15 , 19 , and 21, but rarely have IgH translocations, although CCND-1/CCND-2/CCND-3 dysregulation appears to occur as an early event. This may sensitize these cells to proliferative stimuli, resulting in selective expansion as a result of interaction with BMM that produce IL-6 and other cytokines.
Three types of growth factors have been identified in plasma cells:
- The IL-6 family cytokines, which activate the Janus kinase-signal transducer and activator of transcription (JAK/STAT) and mitogen-activated protein (MAP) kinase pathways;
- Growth factors activating the phosphatidylinositol (PI)-3 kinase/AKT and MAP kinase pathways, and
- B-cell-activating factor (BAFF) or proliferation-inducing ligand (APRIL).
These growth factors may operate synergetically being co-localized together with cytoplasmic transduction elements in membrane caveolae.
Proteasome inhibitors are emerging as a promising class of anti-cancer therapeutic agents in MM, e.g. bortezomib which inhibits NF-kappaB translocation / transcription and critical signalling pathways, notably IL-6-induced proliferation and/or survival.
  
Entity Prostate cancer
Cytogenetics No rearrangements reported.
Oncogenesis IL-6 induces divergent proliferative responses in prostate cells. IL-6 is expressed in benign and malignant prostate tissue and levels of both IL-6 and IL-6R increase during prostate carcinogenesis. Serum levels of IL-6 are elevated in patients with treatment-refractory prostate carcinoma.IL-6 has also been shown to promote prostate cell growth, except in LNCaP cells, in which arrest and differentiation are produced. IL-6 induces activation of the androgen receptor (AR) in the absence of androgen. IL-6 also modulates vascular endothelial growth factor expression and neuroendocrine differentiation in prostate cells. Anti-IL-6 antibodies showed an inhibitory effect on PC-3 xenografts. Hence, IL-6 is widely considered a promising potential therapeutic target in prostate cancer.
Androgen receptor (AR), which is generally expressed in prostate cancers, promotes tumor progression in various ways, including ligand-independent activation. IL-6 is among the most important nonsteroidal regulators of AR activity reaching about half the maximum levels achieved by AR alone. At low concentrations of androgen, IL-6 and androgen operate synergistically to activate AR.
In prostate carcinoma cells homeodomain protein GBX2 was identified to contribute directly to IL6 expression by binding within the promoter region containing the consensus sequence for GBX2.
  
Entity Hodgkin lymphoma
Cytogenetics No rearrangements detected.
Oncogenesis Hodgkin lymphoma (HL) cells express multiple cytokines, notably IL6, which contributes to the immunoreactive phenotype and of which high levels are associated with bad prognosis. Both transcription factors, NFkB and AP1 are constitutively activated in in HL cells driving expression of IL6 and also disturbing the pro/anti-apoptotic balance. Additionally, homeodomain protein HLXB9 contributes to the IL6 expression. HLXB9 is closely related to homeodomain protein GBX2 contributing to IL6 expression in prostate carcinoma cells. So, tumor type specific homeobox genes are involved in high level expression of IL6.
  
Entity Cancer cachexia
Cytogenetics No rearrangements reported.
Oncogenesis Unlike acute inflammation which is a defense response, chronic inflammation may promote cancer. Several pro-inflammatory gene products modulate apoptosis, proliferation, angiogenesis, invasion, and metastasis, including IL-6, which is subject to regulation by NF-kB, which is constitutively active in most tumors. About one-in-three cancer deaths are due to cachexia (wasting) following the hypercatabolism of the body's carbon sources. Tumor-inflammatory responses encompass synthesis of cytokines, including IL-6 which induces cachexia by altering lipids and protein metabolism. IL-6-like cytokines inhibit lipid biosynthesis by adipocytes and cause the atrophy and increased catabolism of muscle protein. Reduced serum IL-6 levels induced by medroxyprogesterone acetate has been reported to exert an anti-cachectic effect in advanced breast cancer.
  

External links

Nomenclature
HugoIL6
GDBIL6
Entrez_GeneIL6  3569  interleukin 6 (interferon, beta 2)
Cards
AtlasIL6ID519ch7p15
GeneCardsIL6
EnsemblIL6 [Search_View]   ENSG00000136244 [Gene_View]
GenatlasIL6
GeneLynxIL6
eGenomeIL6
euGene3569
Genomic and cartography
GoldenPathIL6  -  7p15.3   chr7:22733343-22738145 +  7p21   [Description]    (hg18-Mar_2006)
EnsemblIL6 - 7p21 [CytoView]
NCBIMapview
OMIMDisease map [OMIM]
HomoloGeneIL6
Gene and transcription
GenbankA09363 [ ENTREZ ]
GenbankBC015511 [ ENTREZ ]
GenbankBT019748 [ ENTREZ ]
GenbankBT019749 [ ENTREZ ]
GenbankCR450296 [ ENTREZ ]
RefSeqNM_000600 [ SRS ]    NM_000600 [ ENTREZ ]
RefSeqAC_000050 [ SRS ]    AC_000050 [ ENTREZ ]
RefSeqAC_000068 [ SRS ]    AC_000068 [ ENTREZ ]
RefSeqNC_000007 [ SRS ]    NC_000007 [ ENTREZ ]
RefSeqNT_007819 [ SRS ]    NT_007819 [ ENTREZ ]
RefSeqNT_079592 [ SRS ]    NT_079592 [ ENTREZ ]
RefSeqNW_923240 [ SRS ]    NW_923240 [ ENTREZ ]
AceViewIL6 AceView - NCBI
UnigeneHs.654458 [ SRS ]    Hs.654458 [ NCBI ]     HS654458 [ spliceNest ]
Fast-db2710 (alternative variants)
Protein : pattern, domain, 3D structure
SwissProtP05231 [ SRS]    P05231 [ EXPASY ]     P05231 [ INTERPRO ]
PrositePS00254 INTERLEUKIN_6 [ SRS ]    PS00254 INTERLEUKIN_6 [ Expasy ]
InterproIPR012351 4_helix_cytokine_core [ SRS ]    IPR012351 4_helix_cytokine_core [ EBI ]
InterproIPR003573 IL6_MGF_GCSF [ SRS ]    IPR003573 IL6_MGF_GCSF [ EBI ]
InterproIPR003574 Interleukin_6 [ SRS ]    IPR003574 Interleukin_6 [ EBI ]
CluSTrP05231
PfamPF00489 IL6 [ SRS ]    PF00489 IL6 [ Sanger ]    pfam00489 [ NCBI-CDD ]
SmartSM00126 IL6 [EMBL]
BlocksP05231
PDB1ALU [ SRS ]    1ALU [ PdbSum ],   1ALU [ IMB ]   1ALU [ RSDB ]
PDB1IL6 [ SRS ]    1IL6 [ PdbSum ],   1IL6 [ IMB ]   1IL6 [ RSDB ]
PDB1N2Q [ SRS ]    1N2Q [ PdbSum ],   1N2Q [ IMB ]   1N2Q [ RSDB ]
PDB1P9M [ SRS ]    1P9M [ PdbSum ],   1P9M [ IMB ]   1P9M [ RSDB ]
PDB2IL6 [ SRS ]    2IL6 [ PdbSum ],   2IL6 [ IMB ]   2IL6 [ RSDB ]
HPRD00970
Protein Interaction databases
DIPP05231
IntActP05231
Polymorphism : SNP, mutations, diseases
OMIM147620;148000;166710    [ map ]   
GENECLINICS147620;148000;166710
SNPIL6 [dbSNP-NCBI]  
SNPNM_000600 [SNP-NCI]  
SNPIL6 [GeneSNPs - Utah]  IL6] [HGBASE - SRS]
HAPMAPIL6 [HAPMAP]  
HGMDIL6
General knowledge
Family BrowserIL6 [UCSC Family Browser]
SOURCENM_000600
SMDHs.654458
SAGEHs.654458
GOneutrophil apoptosis [Amigo]  neutrophil apoptosis
GOcytokine activity [Amigo]  cytokine activity
GOinterleukin-6 receptor binding [Amigo]  interleukin-6 receptor binding
GOprotein binding [Amigo]  protein binding
GOextracellular region [Amigo]  extracellular region
GOextracellular space [Amigo]  extracellular space
GOacute-phase response [Amigo]  acute-phase response
GOhumoral immune response [Amigo]  humoral immune response
GOcell surface receptor linked signal transduction [Amigo]  cell surface receptor linked signal transduction
GOcell-cell signaling [Amigo]  cell-cell signaling
GOpositive regulation of cell proliferation [Amigo]  positive regulation of cell proliferation
GOnegative regulation of cell proliferation [Amigo]  negative regulation of cell proliferation
GOdefense response to protozoan [Amigo]  defense response to protozoan
GOnegative regulation of apoptosis [Amigo]  negative regulation of apoptosis
GOnegative regulation of chemokine biosynthetic process [Amigo]  negative regulation of chemokine biosynthetic process
GOpositive regulation of T-helper 2 cell differentiation [Amigo]  positive regulation of T-helper 2 cell differentiation
GOpositive regulation of translation [Amigo]  positive regulation of translation
GOpositive regulation of transcription, DNA-dependent [Amigo]  positive regulation of transcription, DNA-dependent
GOnegative regulation of hormone secretion [Amigo]  negative regulation of hormone secretion
BIOCARTALow-density lipoprotein (LDL) pathway during atherogenesis    [Genes]
BIOCARTACells and Molecules involved in local acute inflammatory response    [Genes]
BIOCARTACytokine Network    [Genes]
BIOCARTAErythrocyte Differentiation Pathway    [Genes]
BIOCARTARole of ERBB2 in Signal Transduction and Oncology    [Genes]
BIOCARTAIL-10 Anti-inflammatory Signaling Pathway    [Genes]
BIOCARTAIL 17 Signaling Pathway    [Genes]
BIOCARTASignal transduction through IL1R    [Genes]
BIOCARTAIL 5 Signaling Pathway    [Genes]
BIOCARTAIL 6 signaling pathway    [Genes]
BIOCARTACytokines and Inflammatory Response    [Genes]
BIOCARTARegulation of hematopoiesis by cytokines    [Genes]
KEGGCytokine-cytokine receptor interaction
KEGGToll-like receptor signaling pathway
KEGGJak-STAT signaling pathway
KEGGHematopoietic cell lineage
PubGeneIL6
TreeFamIL6
CTD3569 [Comparative ToxicoGenomics Database]
Other databases
Probes
ProbeIL6 Related clones (RZPD - Berlin)
PubMed
PubMed499 Pubmed reference(s) in LocusLink

Bibliography

Identification of the human 26-kD protein, interferon beta 2 (IFN-beta 2), as a B cell hybridoma/plasmacytoma growth factor induced by interleukin 1 and tumor necrosis factor.
Van Damme J, Opdenakker G, Simpson RJ, Rubira MR, Cayphas S, Vink A, Billiau A, Van Snick J
The Journal of experimental medicine. 1987 ; 165 (3) : 914-919.
PMID 3493322
 
Haemopoietic receptors and helical cytokines.
Bazan JF
Immunology today. 1990 ; 11 (10) : 350-354.
PMID 2171545
 
IL-6-regulated transcription factors.
Akira S
The international journal of biochemistry & cell biology. 1997 ; 29 (12) : 1401-1418.
PMID 9570135
 
Interleukin-6: structure-function relationships.
Simpson RJ, Hammacher A, Smith DK, Matthews JM, Ward LD
Protein science : a publication of the Protein Society. 1997 ; 6 (5) : 929-955.
PMID 9144766
 
Enhanced GBX2 expression stimulates growth of human prostate cancer cells via transcriptional up-regulation of the interleukin 6 gene.
Gao AC, Lou W, Isaacs JT
Clinical cancer research : an official journal of the American Association for Cancer Research. 2000 ; 6 (2) : 493-497.
PMID 10690529
 
Regulation of interleukin-6 secretion from breast cancer cells and its clinical implications.
Kurebayashi J
Breast cancer (Tokyo, Japan). 2000 ; 7 (2) : 124-129.
PMID 11029783
 
IL-6-like cytokines and cancer cachexia: consequences of chronic inflammation.
Barton BE
Immunologic research. 2001 ; 23 (1) : 41-58.
PMID 11417859
 
Interleukin-6 regulates androgen receptor activity and prostate cancer cell growth.
Culig Z, Bartsch G, Hobisch A
Molecular and cellular endocrinology. 2002 ; 197 (1-2) : 231-238.
PMID 12431817
 
Drug resistance and drug development in multiple myeloma.
Dalton WS
Seminars in oncology. 2002 ; 29 (6 Suppl 17) : 21-25.
PMID 12520481
 
The role of cytokines in regulating estrogen synthesis: implications for the etiology of breast cancer.
Purohit A, Newman SP, Reed MJ
Breast cancer research : BCR. 2002 ; 4 (2) : 65-69.
PMID 11879566
 
Role of the androgen receptor axis in prostate cancer.
Culig Z
Urology. 2003 ; 62 (5 Suppl 1) : 21-26.
PMID 14607214
 
Principles of interleukin (IL)-6-type cytokine signalling and its regulation.
Heinrich PC, Behrmann I, Haan S, Hermanns HM, Mˆºller-Newen G, Schaper F
The Biochemical journal. 2003 ; 374 (Pt 1) : 1-20.
PMID 12773095
 
Interleukin-6, CD45 and the src-kinases in myeloma cell proliferation.
Ishikawa H, Tsuyama N, Abroun S, Liu S, Li FJ, Otsuyama K, Zheng X, Kawano MM
Leukemia & lymphoma. 2003 ; 44 (9) : 1477-1481.
PMID 14565647
 
Survival and proliferation factors of normal and malignant plasma cells.
Klein B, Tarte K, Jourdan M, Mathouk K, Moreaux J, Jourdan E, Legouffe E, De Vos J, Rossi JF
International journal of hematology. 2003 ; 78 (2) : 106-113.
PMID 12953803
 
Effects of all-trans retinoic acid (ATRA) on human myeloma cells.
Otsuki T, Sakaguchi H, Hatayama T, Wu P, Takata A, Hyodoh F
Leukemia & lymphoma. 2003 ; 44 (10) : 1651-1656.
PMID 14692515
 
Targeted anti-interleukin-6 monoclonal antibody therapy for cancer: a review of the rationale and clinical evidence.
Trikha M, Corringham R, Klein B, Rossi JF
Clinical cancer research : an official journal of the American Association for Cancer Research. 2003 ; 9 (13) : 4653-4665.
PMID 14581334
 
The interleukin-6 gene: a susceptibility factor that may contribute to racial and ethnic disparities in breast cancer mortality.
Berger FG
Breast cancer research and treatment. 2004 ; 88 (3) : 281-285.
PMID 15609131
 
Advances in biology of multiple myeloma: clinical applications.
Hideshima T, Bergsagel PL, Kuehl WM, Anderson KC
Blood. 2004 ; 104 (3) : 607-618.
PMID 15090448
 
Immunomodulation of multiple myeloma.
Tohnya TM, Figg WD
Cancer biology & therapy. 2004 ; 3 (11) : 1060-1061.
PMID 15640623
 
Involvement of IL-6 in the pathogenesis of inflammatory bowel disease and colon cancer.
Atreya R, Neurath MF
Clinical reviews in allergy & immunology. 2005 ; 28 (3) : 187-196.
PMID 16129903
 
Interleukin-6 regulation of prostate cancer cell growth.
Culig Z, Steiner H, Bartsch G, Hobisch A
Journal of cellular biochemistry. 2005 ; 95 (3) : 497-505.
PMID 15838876
 
Bortezomib (Velcade)--a new therapeutic strategy for patients with refractory multiple myeloma.
Goranov SE, Goranova-Marinova VS
Folia medica. 2005 ; 47 (3-4) : 11-19.
PMID 16761388
 
The role of IL-6 and STAT3 in inflammation and cancer.
Hodge DR, Hurt EM, Farrar WL
European journal of cancer (Oxford, England : 1990). 2005 ; 41 (16) : 2502-2512.
PMID 16199153
 
Interleukin-6: from basic science to medicine--40 years in immunology.
Kishimoto T
Annual review of immunology. 2005 ; 23 : 1-21.
PMID 15771564
 
HLXB9 activates IL6 in Hodgkin lymphoma cell lines and is regulated by PI3K signalling involving E2F3.
Nagel S, Scherr M, Quentmeier H, Kaufmann M, Zaborski M, Drexler HG, MacLeod RA
Leukemia : official journal of the Leukemia Society of America, Leukemia Research Fund, U.K. 2005 ; 19 (5) : 841-846.
PMID 15772702
 
Signalling and survival pathways in multiple myeloma.
Bommert K, Bargou RC, Stˆºhmer T
European journal of cancer (Oxford, England : 1990). 2006 ; 42 (11) : 1574-1580.
PMID 16797970
 
Androgen axis in prostate cancer.
Culig Z, Bartsch G
Journal of cellular biochemistry. 2006 ; 99 (2) : 373-381.
PMID 16598769
 
Mitogenic signals initiated via interleukin-6 receptor complexes in cooperation with other transmembrane molecules in myelomas.
Ishikawa H, Tsuyama N, Obata M, M Kawano M
Journal of clinical and experimental hematopathology : JCEH. 2006 ; 46 (2) : 55-66.
PMID 17142955
 
Cytokines in breast cancer.
Nicolini A, Carpi A, Rossi G
Cytokine & growth factor reviews. 2006 ; 17 (5) : 325-337.
PMID 16931107
 
Interleukin-6 trans-signalling in chronic inflammation and cancer.
Scheller J, Ohnesorge N, Rose-John S
Scandinavian journal of immunology. 2006 ; 63 (5) : 321-329.
PMID 16640655
 
Interleukin-6 and its receptor: from bench to bedside.
Scheller J, Rose-John S
Medical microbiology and immunology. 2006 ; 195 (4) : 173-183.
PMID 16741736
 
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Contributor(s)

Written03-2007Stefan Nagel, Roderick A F MacLeod

Citation

This paper should be referenced as such :
Nagel S, MacLeod RAF . IL6 (interleukin 6 (interferon beta 2)). Atlas Genet Cytogenet Oncol Haematol. March 2007 .
URL : http://AtlasGeneticsOncology.org/Genes/IL6ID519ch7p15.html

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jul 2 08:24:13 2008


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