Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MAPK10 (mitogen-activated protein kinase 10)

Identity

Other namesJNK3 (C-Jun N-terminal kinase 3)
Stress-activated protein kinase 3 (SAPK3)
HGNC (Hugo) MAPK10
Location 4q21-q23
Location_base_pair Starts at 87156656 and ends at 87593307 bp from pter ( according to hg18-Mar_2006)  [Mapping]

DNA/RNA

Description The JNK3 gene maps on chromosome 4q22.1-q23 spanning 143716bp. It contains 19 confirmed introns, 16 of which are alternative.
Transcription Through alternative splicing, 7 types of transcripts are generated which produce 7 distinct JNK3 proteins. Due to the alternative splicing, the molecular weight of JNK3 varied from 45 to 57 kD.

Protein

Description All JNK proteins contain a protein kinase domain that belong to a very extensive family of eukaryotic serine/threonine proteins kinase. A number of conserved regions have been identified in the catalytic domain of JNKs. In the N-terminal extremity of the catalytic domain there is a glycine-rich motif in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. A conserved aspartic acid reside that is critical for the catalytic activity of kinase has also been identified in the central part of the catalytic domain.
Expression JNK3 is mainly expressed in nervous system, heart and testis.
Function The members of JNK family act as an integration point for multiple intracellular biochemical signals governing a wide variety of cellular processes such as proliferation, differentiation, apoptosis, migration, transcriptional regulation, and development. JNK targets specific transcription factors and thus mediates immediate-early gene expression in response to various stress signals including ultraviolet (UV) radiation, oxidative stress, protein malfolding in endoplasmic reticulum, osmotical shock, and inflammatory mediators. These transcription factors include AP-1, ATF-2, Elk-1, p53, etc... Several upstream dual specific protein kinases, such as MKK4/SEK1 and MKK7, can activate JNK through phosphorylation of the conversed Thr-Pro-Tyr motif on JNK proteins. In mammalian cells, activated JNK can phosphorylate the N-terminus of c-Jun, which contains both JNK docking site and JNK phosphorylation site (ser63 and ser73), orJunD, which lacks a JNK docking site but contains a JNK phosphorylation site. JNK is unable to phosphorylate JunB due to the lack of a JNK phosphorylation site inJunB, despite there is a functional JNK docking site. Comparison of the binding activity of JNK isoforms demonstrates that JNK2 bind c-Jun approximately 25 times more efficiently than did JNK1. Therefore, individual members of the JNK family may selectively target specific transcription factors in vivo. One of the most important functions of JNK is the regulation of apoptosis. Emerging evidence indicates that JNK activation is obligatory for apoptosis induced by both receptor-mediated ÒextrinsicÓ pathway or mitochondria-mediated ÒintrinsicÓ pathway. JNK activation may contribute to the initiation of Fas-induced apoptosis, possibly through the amplification of autocrine or paracrine Fas signaling by JNK-dependent Fas ligand (FasL) gene expression. In addition, JNK has been indicated in the apoptosis induced by Daxx, a Fas death domain (FADD) interaction protein. Through its serine/threonine kinase activity, JNK may contribute to mitochondria-mediated apoptosis by phosphorylating pro- or anti-apoptoticBcl-2 family proteins. Finally, JNK has also been indicated as an important kinase phosphorylating p53 and subsequently facilitating p53-dependent apoptotic responses. Sustained JNK activation may be responsible for the enhanced apoptosis observed in RelA-/- or Ikkb-/- mouse embryonic fibroblasts treated with TNFa. It was suggested that deficiency of RelA or IKKb caused a decreased expression of XIAP or GADD45b, which may antagonize the activation of JNK activation. However, such speculation contradicts the previous observations indicating that both GADD45b and XIAP are activators, rather than inhibitors for JNK activation. Moreover, gene profiling in our recent studies indicated no substantial difference of basal or inducible GADD45b and XIAP mRNA in wild type cells and Ikkb-/- cells.

Implicated in

Entity Obesity, insulin resistance, neurodegenerative diseases, inflammation, cancer.
Oncogenesis Loss of expression of JNK3 has been found in some brain tumors.
  

External links

Nomenclature
HGNC (Hugo)MAPK10   6872
Entrez_Gene (NCBI)MAPK10  5602  mitogen-activated protein kinase 10
Cards
AtlasJNK3ID427
GeneCards (Weizmann)MAPK10
Ensembl (Hinxton)ENSG00000109339 [Gene_View]  MAPK10 [Vega]
AceView (NCBI)MAPK10
Genatlas (Paris)MAPK10
euGene (Indiana)5602
SOURCE (Stanford)NM_002753 NM_138980 NM_138981 NM_138982
Gene Expression (Array Express) ENSG00000109339
Genomic and cartography
GoldenPath (UCSC)MAPK10  -     chr4:87156656-87593307 -  4q22.1-q23   [Description]    (hg18-Mar_2006)
EnsemblMAPK10 - 4q22.1-q23 [CytoView]
Mapping of homologs : NCBIMAPK10 [Mapview]
OMIM602897   606369   
Gene and transcription
Gene : Genbank (Entrez)AK022161 AK057723 AK091104 AK124791 AK225974
Reference sequence (RefSeq transcript) :SRSNM_002753 NM_138980 NM_138981 NM_138982
Reference transcript : EntrezNM_002753 NM_138980 NM_138981 NM_138982
RefSeq genomic : SRSAC_000047 AC_000136 NC_000004 NG_013325 NT_016354 NW_001838915 NW_922162
RefSeq genomic : EntrezAC_000047 AC_000136 NC_000004 NG_013325 NT_016354 NW_001838915 NW_922162
Consensus coding sequences : CCDS NCBIMAPK10
Cluster EST : UnigeneHs.723352 [ SRS ] Hs.723352 [ NCBI ]
Alternative Splicing : Fast-db (Paris)6970
Protein : pattern, domain, 3D structure
Protein : UniProt/SwissProtP53779 (SRS) P53779 (Expasy) P53779 (Uniprot)
With graphics : InterProP53779
Splice isoforms : VarSplice FASTAP53779(VarSplice FASTA)
Domaine pattern : Prosite (SRS)MAPK (PS01351)    PROTEIN_KINASE_ATP (PS00107)    PROTEIN_KINASE_DOM (PS50011)    PROTEIN_KINASE_ST (PS00108)   
Domain pattern : Prosite (Expaxy)MAPK (PS01351)    PROTEIN_KINASE_ATP (PS00107)    PROTEIN_KINASE_DOM (PS50011)    PROTEIN_KINASE_ST (PS00108)   
Domains : Interpro (SRS)JNK_MAPK    Kinase-like_dom    MAP_kinase_CS    Prot_kinase_cat_dom    Se/Thr_prot_kinase-like_dom    Ser/Thr_prot_kinase_AS    Ser/Thr_prot_kinase_dom   
Domains : Interpro (EBI)JNK_MAPK    Kinase-like_dom    MAP_kinase_CS    Prot_kinase_cat_dom    Se/Thr_prot_kinase-like_dom    Ser/Thr_prot_kinase_AS    Ser/Thr_prot_kinase_dom   
Related proteins : CluSTrP53779
Domain families : Pfam SRSPkinase (PF00069)   
Domain families : Pfam SangerPkinase (PF00069)   
Domain families : Pfam NCBIpfam00069   
Domain families : Smart EMBLS_TKc (SM00220)  
Blocks (Seattle)P53779
Crystal structure of protein : PDB SRS1JNK    1PMN    1PMQ    1PMU    1PMV    2B1P    2EXC    2O0U    2O2U    2OK1    2P33    2R9S    2WAJ    2ZDT    2ZDU    3CGF    3CGO    3DA6    3FI2    3FI3    3FV8    3G90    3G9L    3G9N   
Crystal structure of protein : PDBSum1JNK    1PMN    1PMQ    1PMU    1PMV    2B1P    2EXC    2O0U    2O2U    2OK1    2P33    2R9S    2WAJ    2ZDT    2ZDU    3CGF    3CGO    3DA6    3FI2    3FI3    3FV8    3G90    3G9L    3G9N   
Crystal structure of protein : IMB1JNK    1PMN    1PMQ    1PMU    1PMV    2B1P    2EXC    2O0U    2O2U    2OK1    2P33    2R9S    2WAJ    2ZDT    2ZDU    3CGF    3CGO    3DA6    3FI2    3FI3    3FV8    3G90    3G9L    3G9N   
Crystal structure of protein : PDB RSDB1JNK    1PMN    1PMQ    1PMU    1PMV    2B1P    2EXC    2O0U    2O2U    2OK1    2P33    2R9S    2WAJ    2ZDT    2ZDU    3CGF    3CGO    3DA6    3FI2    3FI3    3FV8    3G90    3G9L    3G9N   
HPRD04207
Protein Interaction databases
DIP (DOE-UCLA)P53779
IntAct (EBI)P53779
Polymorphism : SNP, mutations, diseases
Single Nucleotide Polymorphism (SNP) : dbSNP NCBIMAPK10
SNP : GeneSNP UtahMAPK10
SNP : HGBaseMAPK10
Genetic variants : HAPMAPMAPK10
Somatic Mutations in Cancer : COSMICMAPK10 
Mutations and Diseases : HGMDMAPK10
Hereditary diseases : OMIM602897    606369   
Hereditary diseases : GENETests602897    606369   
Diseases : Genetic AssociationMAPK10
General knowledge
Homologs : HomoloGeneMAPK10
Homology/Alignments : Family Browser UCSCMAPK10
Phylogenetic Trees/Animal Genes : TreeFamMAPK10
Catalytic activity : Enzyme2.7.11.24 [ Enzyme-Expasy ]   2.7.11.24 [ Enzyme-SRS ]   2.7.11.24 [ IntEnz-EBI ]   2.7.11.24 [ BRENDA ]   2.7.11.24 [ KEGG ]   
Chemical/Protein Interactions : CTD5602
Keywords Ontology : AmiGOnucleotide binding  protein serine/threonine kinase activity  JUN kinase activity  MAP kinase activity  MAP kinase kinase activity  protein binding  ATP binding  cytoplasm  mitochondrion  plasma membrane  protein amino acid phosphorylation  signal transduction  JNK cascade  transferase activity  
Keywords Ontology : EGO-EBInucleotide binding  protein serine/threonine kinase activity  JUN kinase activity  MAP kinase activity  MAP kinase kinase activity  protein binding  ATP binding  cytoplasm  mitochondrion  plasma membrane  protein amino acid phosphorylation  signal transduction  JNK cascade  transferase activity  
Pathways : BIOCARTAMAPKinase Signaling Pathway [Genes]   
Pathways : KEGGMAPK signaling pathwayWnt signaling pathwayFocal adhesionToll-like receptor signaling pathwayFc epsilon RI signaling pathwayInsulin signaling pathwayGnRH signaling pathwayAdipocytokine signaling pathwayType II diabetes mellitusEpithelial cell signaling in Helicobacter pylori infectionColorectal cancer
Other databases
Probes
Probes : ImagenesMAPK10 Related clones (RZPD - Berlin)
Literature
PubMed56 Pubmed reference(s) in Entrez
PubGeneMAPK10

Bibliography

Daxx, a novel Fas-binding protein that activates JNK and apoptosis.
Yang X, Khosravi-Far R, Chang HY, Baltimore D
Cell. 1997 ; 89 (7) : 1067-1076.
PMID 9215629
 
Stress-induced Fas ligand expression in T cells is mediated through a MEK kinase 1-regulated response element in the Fas ligand promoter.
Faris M, Latinis KM, Kempiak SJ, Koretzky GA, Nel A
Molecular and cellular biology. 1998 ; 18 (9) : 5414-5424.
PMID 9710625
 
JNK targets p53 ubiquitination and degradation in nonstressed cells.
Fuchs SY, Adler V, Buschmann T, Yin Z, Wu X, Jones SN, Ronai Z
Genes & development. 1998 ; 12 (17) : 2658-2663.
PMID 9732264
 
A family of stress-inducible GADD45-like proteins mediate activation of the stress-responsive MTK1/MEKK4 MAPKKK.
Takekawa M, Saito H
Cell. 1998 ; 95 (4) : 521-530.
PMID 9827804
 
Multiple docking sites on substrate proteins form a modular system that mediates recognition by ERK MAP kinase.
Jacobs D, Glossip D, Xing H, Muslin AJ, Kornfeld K
Genes & development. 1999 ; 13 (2) : 163-175.
PMID 9925641
 
Signal transduction by the JNK group of MAP kinases.
Davis RJ
Cell. 2000 ; 103 (2) : 239-252.
PMID 11057897
 
Induction of gadd45beta by NF-kappaB downregulates pro-apoptotic JNK signalling.
De Smaele E, Zazzeroni F, Papa S, Nguyen DU, Jin R, Jones J, Cong R, Franzoso G
Nature. 2001 ; 414 (6861) : 308-313.
PMID 11713530
 
Ubiquitin-protein ligase activity of X-linked inhibitor of apoptosis protein promotes proteasomal degradation of caspase-3 and enhances its anti-apoptotic effect in Fas-induced cell death.
Suzuki Y, Nakabayashi Y, Takahashi R
Proceedings of the National Academy of Sciences of the United States of America. 2001 ; 98 (15) : 8662-8667.
PMID 11447297
 
Inhibition of JNK activation through NF-kappaB target genes.
Tang G, Minemoto Y, Dibling B, Purcell NH, Li Z, Karin M, Lin A
Nature. 2001 ; 414 (6861) : 313-317.
PMID 11713531
 
The c-Jun NH2-terminal kinase3 (JNK3) gene: genomic structure, chromosomal assignment, and loss of expression in brain tumors.
Yoshida S, Fukino K, Harada H, Nagai H, Imoto I, Inazawa J, Takahashi H, Teramoto A, Emi M
Journal of human genetics. 2001 ; 46 (4) : 182-187.
PMID 11322657
 
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written01-2003Fei Chen

Citation

This paper should be referenced as such :
Chen F . MAPK10 (mitogen-activated protein kinase 10). Atlas Genet Cytogenet Oncol Haematol. January 2003 .
URL : http://AtlasGeneticsOncology.org/Genes/JNK3ID427.html

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Feb 6 13:40:55 CET 2010

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.