Atlas of Genetics and Cytogenetics in Oncology and Haematology


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JUNB

Identity

Other namesJUN-B
JUN protooncogene homolog B
Hugo JUNB
Location 19p13.2

DNA/RNA

Description The JUNB gene maps on chromosome 19p13.2 covering 1820 bp.
Transcription It contains no confirmed intron. Therefore, no alternative splicing transcripts have been identified.

Protein

 
Description JUNB has 347 amino acids with a predicted molecular weight 35,9 kD. Structurally, JUNB is similar to JUN, which contains a JNK docking site, nuclear localization signal, basic domain for DNA binding and a leucine zipper domain for dimerization. However, JUNB does not contain a JUNK phosphorylation site. Thus, the transactivation activity of JUNB is not regulated by JNK.
Expression Ubiquitously expressed.
Localisation Nuclear
Function JUNB is a member of JUN family (JUN, JUNB and JUND) that can dimerize with one another, or with members of Fos and ATF families, to form AP-1 transcription factor. Comparing with JUN, the transactivation activity of JUNB is much weaker. Due to the small differences on the amino acid sequences in the basic DNA bindind domain, and leucine zipper domain, JUNB requires multiple AP-1 DNA binding sites for sufficient DNA binding. A number of studies demonstrated that JUNB antagonizes the functions of JUN in cell cycle regulation, proliferation and transformation by competing with JUN to form less efficient transactivating dimers. Thus, JUNB was considered as a tumor suppressor.
In gene knockout studies, mice lacking Jun gene die during embryonic day 12.5 and 13.5, whereas embryos lacking JunB die earlier, around day 9.5, owing to vascular defects in the placenta and extraembryonic tissue. Interestingly; gene knock-in experiment indicated that JUNB could partially substitute the activities of JUN in mouse development and cell proliferation. As possible explanation for this is that in presence of JUN, JUNB is a negative regulator for JUN. In contrast, in the absence of JUN, JUNB may substitute JUN and activate AP-1 target genes required for development and cell proliferation.

Implicated in

Entity Inflammation, cancer
Oncogenesis Decreased expression of JUNB has been observed in certain human cancer. However, no mutation, rearrangement or amplification of JunB gene has been reported.
  

External links

Nomenclature
HugoJUNB
GDBJUNB
Entrez_GeneJUNB  3726  jun B proto-oncogene
Cards
AtlasJUNBID178
GeneCardsJUNB
EnsemblJUNB [Search_View]   ENSG00000171223 [Gene_View]
GenatlasJUNB
GeneLynxJUNB
eGenomeJUNB
euGene3726
Genomic and cartography
GoldenPathJUNB  -  19p13.2   chr19:12763310-12765124 +  19p13.2   [Description]    (hg18-Mar_2006)
EnsemblJUNB - 19p13.2 [CytoView]
NCBIMapview
OMIMDisease map [OMIM]
HomoloGeneJUNB
Gene and transcription
GenbankAK222532 [ ENTREZ ]
GenbankBC004250 [ ENTREZ ]
GenbankBC009465 [ ENTREZ ]
GenbankBC009466 [ ENTREZ ]
GenbankBT019760 [ ENTREZ ]
RefSeqNM_002229 [ SRS ]    NM_002229 [ ENTREZ ]
RefSeqAC_000062 [ SRS ]    AC_000062 [ ENTREZ ]
RefSeqNC_000019 [ SRS ]    NC_000019 [ ENTREZ ]
RefSeqNT_011295 [ SRS ]    NT_011295 [ ENTREZ ]
RefSeqNW_927195 [ SRS ]    NW_927195 [ ENTREZ ]
AceViewJUNB AceView - NCBI
UnigeneHs.25292 [ SRS ]    Hs.25292 [ NCBI ]     HS25292 [ spliceNest ]
Fast-db7062 (alternative variants)
Protein : pattern, domain, 3D structure
SwissProtP17275 [ SRS]    P17275 [ EXPASY ]     P17275 [ INTERPRO ]
PrositePS50217 BZIP [ SRS ]    PS50217 BZIP [ Expasy ]
PrositePS00036 BZIP_BASIC [ SRS ]    PS00036 BZIP_BASIC [ Expasy ]
InterproIPR011616 bZIP_1 [ SRS ]    IPR011616 bZIP_1 [ EBI ]
InterproIPR005643 JNK [ SRS ]    IPR005643 JNK [ EBI ]
InterproIPR002112 Leuzip_Jun [ SRS ]    IPR002112 Leuzip_Jun [ EBI ]
InterproIPR004827 TF_bZIP [ SRS ]    IPR004827 TF_bZIP [ EBI ]
CluSTrP17275
PfamPF00170 bZIP_1 [ SRS ]    PF00170 bZIP_1 [ Sanger ]    pfam00170 [ NCBI-CDD ]
PfamPF03957 Jun [ SRS ]    PF03957 Jun [ Sanger ]    pfam03957 [ NCBI-CDD ]
SmartSM00338 BRLZ [EMBL]
BlocksP17275
HPRD01303
Protein Interaction databases
DIPP17275
IntActP17275
Polymorphism : SNP, mutations, diseases
OMIM165161    [ map ]   
GENECLINICS165161
SNPJUNB [dbSNP-NCBI]  
SNPNM_002229 [SNP-NCI]  
SNPJUNB [GeneSNPs - Utah]  JUNB] [HGBASE - SRS]
HAPMAPJUNB [HAPMAP]  
COSMICJUNB [Somatic mutation (COSMIC-CGP-Sanger)]  
HGMDJUNB
General knowledge
Family BrowserJUNB [UCSC Family Browser]
SOURCENM_002229
SMDHs.25292
SAGEHs.25292
GOchromatin [Amigo]  chromatin
GOtranscription factor activity [Amigo]  transcription factor activity
GORNA polymerase II transcription factor activity [Amigo]  RNA polymerase II transcription factor activity
GOtranscription coactivator activity [Amigo]  transcription coactivator activity
GOtranscription corepressor activity [Amigo]  transcription corepressor activity
GOnucleus [Amigo]  nucleus
GOregulation of transcription from RNA polymerase II promoter [Amigo]  regulation of transcription from RNA polymerase II promoter
GOcellular process [Amigo]  cellular process
GOsequence-specific DNA binding [Amigo]  sequence-specific DNA binding
GOprotein dimerization activity [Amigo]  protein dimerization activity
BIOCARTAGATA3 participate in activating the Th2 cytokine genes expression    [Genes]
PubGeneJUNB
TreeFamJUNB
CTD3726 [Comparative ToxicoGenomics Database]
Other databases
Probes
ProbeJUNB Related clones (RZPD - Berlin)
PubMed
PubMed49 Pubmed reference(s) in LocusLink

Bibliography

JunB is essential for mammalian placentation.
Schorpp-Kistner M, Wang ZQ, Angel P, Wagner EF
The EMBO journal. 1999 ; 18 (4) : 934-948.
PMID 10022836
 
JunB can substitute for Jun in mouse development and cell proliferation.
Passeguˆ© E, Jochum W, Behrens A, Ricci R, Wagner EF
Nature genetics. 2002 ; 30 (2) : 158-166.
PMID 11818961
 
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written01-2003Fei Chen

Citation

This paper should be referenced as such :
Chen F . JUNB. Atlas Genet Cytogenet Oncol Haematol. January 2003 .
URL : http://AtlasGeneticsOncology.org/Genes/JUNBID178.html

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jul 2 08:24:27 2008


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