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MYH11 (myosin heavy chain) (incomplete)

Identity

HGNC (Hugo) MYH11
Location 16p13
Location_base_pair Starts at 15796994 and ends at 15950887 bp from pter ( according to hg19-Feb_2009)  [Mapping]
Local_order proximal (in 16p13.1) from CBP (in 16p13.3) involved in the t(8;16), but distal of MRP, also in 16p13.1

DNA/RNA

 
  c-MYH11 (16p13) in normal cells: PAC 114C15 (top) and PAC 893C15 (below) - Courtesy Mariano Rocchi, Resources for Molecular Cytogenetics. Laboratories willing to validate the probes are wellcome: contact M Rocchi
Transcription alternate splicing in 3¼

Protein

Description the protein¼s name is MYST; 214 KDa, 1857 amino acids known; N-term ATPase globular domain responsible for actin binding and mechanical movement, and a C-term long repeat of coil-coil domain to facilitate filament aggregates; forms hetero-hexameres
Expression smooth muscle
Function muscle contraction
Homology member of the myosin II family

Implicated in

Entity inv(16)(p13q22), t(16;16)(p13;q22), and del(16)(q22) in acute non lymphoblastic leukaemia (ANLL) or myelodysplastic syndromes (MDS) --> CBFb - MYH11
Disease nearly pathognomonic of M4eo-ANLL: with eosinophilia; frequent CNS involvement
Prognosis high CR rate; better prognosis than most other ANLL
Cytogenetics the 3 chromosome anomalies are variants of each other
Hybrid/Mutated Gene 5¼ CBFb - 3¼ MYH11
Abnormal Protein the N-trem and most of CBFb is fused to the MYH11 C-term with its multimerization domain
  

External links

Nomenclature
HGNC (Hugo)MYH11   7569
Entrez_Gene (NCBI)MYH11  4629  myosin, heavy chain 11, smooth muscle
Cards
AtlasMYH11ID43
GeneCards (Weizmann)MYH11
Ensembl (Hinxton)ENSG00000133392 [Gene_View]  MYH11 [Vega]
AceView (NCBI)MYH11
Genatlas (Paris)MYH11
euGene (Indiana)4629
SOURCE (Stanford)NM_001040113 NM_001040114 NM_002474 NM_022844
Gene Expression (Array Express) ENSG00000133392
Genomic and cartography
GoldenPath (UCSC)MYH11  -  16p13   chr16:15796994-15950887 -  16p13.11   [Description]    (hg19-Feb_2009)
EnsemblMYH11 - 16p13.11 [CytoView]
Mapping of homologs : NCBIMYH11 [Mapview]
OMIM132900   160745   
Gene and transcription
Gene : Genbank (Entrez)AA552189 AB020673 AF013570 AF020091 AK125033
Reference sequence (RefSeq transcript) :SRSNM_001040113 NM_001040114 NM_002474 NM_022844
Reference transcript : EntrezNM_001040113 NM_001040114 NM_002474 NM_022844
RefSeq genomic : SRSAC_000059 AC_000148 NC_000016 NG_009299 NT_010393 NW_001838356 NW_926051
RefSeq genomic : EntrezAC_000059 AC_000148 NC_000016 NG_009299 NT_010393 NW_001838356 NW_926051
Consensus coding sequences : CCDS NCBIMYH11
Cluster EST : UnigeneHs.460109 [ SRS ] Hs.460109 [ NCBI ]
Alternative Splicing : Fast-db (Paris)4106
Protein : pattern, domain, 3D structure
Protein : UniProt/SwissProtP35749 (SRS) P35749 (Expasy) P35749 (Uniprot)
With graphics : InterProP35749
Splice isoforms : VarSplice FASTAP35749(VarSplice FASTA)
Domaine pattern : Prosite (SRS)IQ (PS50096)   
Domain pattern : Prosite (Expaxy)IQ (PS50096)   
Domains : Interpro (SRS)IQ_CaM_bd_region    Myosin_head_motor_dom    Myosin_N    Myosin_tail   
Domains : Interpro (EBI)IQ_CaM_bd_region    Myosin_head_motor_dom    Myosin_N    Myosin_tail   
Related proteins : CluSTrP35749
Domain families : Pfam SRSMyosin_head (PF00063)    Myosin_N (PF02736)    Myosin_tail_1 (PF01576)   
Domain families : Pfam SangerMyosin_head (PF00063)    Myosin_N (PF02736)    Myosin_tail_1 (PF01576)   
Domain families : Pfam NCBIpfam00063    pfam02736    pfam01576   
Domain families : Smart EMBLIQ (SM00015)  MYSc (SM00242)  
Blocks (Seattle)P35749
Crystal structure of protein : PDB SRS
Crystal structure of protein : PDBSum
Crystal structure of protein : IMB
Crystal structure of protein : PDB RSDB
Human Protein AtlasENSG00000133392
HPRD01174
Protein Interaction databases
DIP (DOE-UCLA)P35749
IntAct (EBI)P35749
FunCoupENSG00000133392
Polymorphism : SNP, mutations, diseases
Single Nucleotide Polymorphism (SNP) : dbSNP NCBIMYH11
SNP : GeneSNP UtahMYH11
SNP : HGBaseMYH11
Genetic variants : HAPMAPMYH11
Cancer Gene: CensusMYH11 
Somatic Mutations in Cancer : COSMICMYH11 
Translocation Breakpoints in Cancer : TICdbMYH11 
Mutations and Diseases : HGMDMYH11
Hereditary diseases : OMIM132900    160745   
Hereditary diseases : GENETests132900    160745   
Diseases : Genetic AssociationMYH11
General knowledge
Homologs : HomoloGeneMYH11
Homology/Alignments : Family Browser UCSCMYH11
Phylogenetic Trees/Animal Genes : TreeFamMYH11
Chemical/Protein Interactions : CTD4629
Keywords Ontology : AmiGOnucleotide binding  motor activity  actin binding  calmodulin binding  ATP binding  muscle myosin complex  muscle contraction  smooth muscle contraction  structural constituent of muscle  skeletal muscle thick filament assembly  myosin filament  melanosome  elastic fiber assembly  cardiac muscle fiber development  
Keywords Ontology : EGO-EBInucleotide binding  motor activity  actin binding  calmodulin binding  ATP binding  muscle myosin complex  muscle contraction  smooth muscle contraction  structural constituent of muscle  skeletal muscle thick filament assembly  myosin filament  melanosome  elastic fiber assembly  cardiac muscle fiber development  
Pathways : BIOCARTA
Pathways : KEGG
Other databases
Probes
ProbeMYH11 (16p13) in normal cells (bari)
Probes : ImagenesMYH11 Related clones (RZPD - Berlin)
Literature
PubMed35 Pubmed reference(s) in Entrez
PubGeneMYH11

Bibliography

Identification of yeast artificial chromosomes containing the inversion 16 p-arm breakpoint associated with acute myelomonocytic leukemia.
Liu P, Claxton DF, Marlton P, Hajra A, Siciliano J, Freedman M, Chandrasekharappa SC, Yanagisawa K, Stallings RL, Collins FS
Blood. 1993 ; 82 (3) : 716-721.
PMID 8338941
 
A gene for a myosin peptide is disrupted by the inv(16)(p13q22) in acute nonlymphocytic leukemia M4Eo.
van der Reijden BA, Dauwerse JG, Wessels JW, Beverstock GC, Hagemeijer A, van Ommen GJ, Breuning MH
Blood. 1993 ; 82 (10) : 2948-2952.
PMID 8219185
 
A gene for a myosin peptide is disrupted by the inv(16)(p13q22) in acute nonlymphocytic leukemia M4Eo.
van der Reijden BA, Dauwerse JG, Wessels JW, Beverstock GC, Hagemeijer A, van Ommen GJ, Breuning MH
Blood. 1993 ; 82 (10) : 2948-2952.
PMID 8219185
 
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written06-1999Jean-Loup Huret

Citation

This paper should be referenced as such :
Huret JL . MYH11 (myosin heavy chain) (incomplete). Atlas Genet Cytogenet Oncol Haematol. June 1999 .
URL : http://AtlasGeneticsOncology.org/Genes/MYH11ID43.html

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indexed on : Thu Jul 15 14:50:13 CEST 2010

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