Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ABCB1

Identity

Other namesPGY1 (P glycoprotein1/ multidrug resistance 1)
MDR1 (multidrug resistance 1)
HGNC ABCB1
Location 7q21.2

DNA/RNA

Description spans on a 120 kb genomic fragment; separated from MDR3 gene (which is transcribed in the same direction) by only 34 kb of intergenic DNA
Transcription 5 kb mRNA

Protein

Description the protein is called P-glycoprotein; 170 kDa transmembrane glycoprotein which includes 10-15 kDa of N-term glycosylation; the N-term half of the molecule contains 6 transmembrane domains, followed by a large cytoplasmic domain with an ATP binding site, and then a second section with 6 transmembrane domains and an ATP binding site which shows over 65% of amino acid similarity with the first half of the polypeptide
Expression normally expressed at secretory surface of a number of tissues, including biliary canaliculi, proximal tubules of the kidney, intestinal and colonic epithelium; hematopoietic stem cells express high levels of P-glycoprotein; overexpressed in many multidrug resistant cell lines and in tumor cells resistant to chemotherapy
Localisation mainly at the cell membrane, with a secondary localisation at the Golgi apparatus
Function the P-glycoprotein is an energy-dependent efflux pump involved in extrusion of many types of lypophilic coumpounds; it may acts in normal tissues as a protective mechanism against noxious xenobiotics and as a transporter of endogenous substrates; in tumour cells, the drug efflux pump results in a decrease in intracellular drug concentration
Homology closely related gene to MDR3 (also called PGY3), located at the same chromosomal site but not implicated in multidrug resistance; there are 3 murine homolog genes (mdr1, mdr2, mdr3) out of which only 2 (mdr1 and mdr3) are involved in multidrug resistance; member of a large superfamily of transmembrane transporter proteins named ATP Binding Cassette (ABC) transporters or Traffic ATPases; structural homology with other ABC transporter proteins (CFTR, MRP)

Implicated in

Entity tumor cells resistance
Disease tumor cells resistance to a wide variety of antineoplasic agents: doxorubicin, daunorubicin, vinblastine, vincristine, colchicine, actinomycine D, etoposide, tenoposide, mitoxantrone, homoharringtonine; this phenomenon is named "multidrug resistance" (MDR); P-glycoprotein is the main protein responsible for the MDR phenotype; however, other agents may be involved in MDR, independently or in association with P-glycoprotein: "multidrug resistant associated protein" (MRP), "lung resistance protein" (LRP), "anthracycline associated resistance protein" (ARX)
  
Entity leukemias
Disease In leukemia, MDR1 overexpression is observed in patients with a lower complete remission rate and with a shortening of overall survival; frequently associated with intermediate and poor prognosis karyotype; in ANLL, approximately 50% of patients are MDR positive at diagnosis (range 22-70%) and the MDR phenotype is more frequently observed in CD34+ leukemias; in ALL, the average number of MDR-positive cases is 22% at diagnosis
  
Entity tumour cell lines: in numerous continuous tumour cell lines which acquired experimentally a MDR phenotype when cultured with progressively increasing drug concentration, the acquisition of MDR was associated with hyperexpression of P-glycoprotein; for the higher levels of expression, southern blots revealed an increase in the number of copies of the MDR1 gene per cell
Cytogenetics the genomic amplification of MDR1 appears as extrachromosomic "double-minute chromosomes" (DM) or intrachromosomic "homogeneous staining regions" (HSR)
Oncogenesis amplification
  

External links

Nomenclature
HGNCABCB1   40
Entrez_GeneABCB1  5243  ATP-binding cassette, sub-family B (MDR/TAP), member 1
Cards
AtlasPGY1ID105
GeneCardsABCB1
EnsemblABCB1 [Search_View]   ENSG00000085563 [Gene_View]
GenatlasABCB1
GeneLynxABCB1
eGenomeABCB1
euGene5243
Genomic and cartography
GoldenPathABCB1  -  7q21.2   chr7:86970884-87180500 -  7q21.12   [Description]    (hg18-Mar_2006)
EnsemblABCB1 - 7q21.12 [CytoView]
NCBIMapview
OMIMDisease map [OMIM]
HomoloGeneABCB1
Gene and transcription
GenbankAB208970 [ ENTREZ ]
GenbankAF016535 [ ENTREZ ]
GenbankAK290159 [ ENTREZ ]
GenbankAK308467 [ ENTREZ ]
GenbankAM393352 [ ENTREZ ]
RefSeqNM_000927 [ SRS ]    NM_000927 [ ENTREZ ]
RefSeqAC_000050 [ SRS ]    AC_000050 [ ENTREZ ]
RefSeqAC_000068 [ SRS ]    AC_000068 [ ENTREZ ]
RefSeqAC_000139 [ SRS ]    AC_000139 [ ENTREZ ]
RefSeqNC_000007 [ SRS ]    NC_000007 [ ENTREZ ]
RefSeqNT_007933 [ SRS ]    NT_007933 [ ENTREZ ]
RefSeqNT_079595 [ SRS ]    NT_079595 [ ENTREZ ]
RefSeqNW_001839064 [ SRS ]    NW_001839064 [ ENTREZ ]
RefSeqNW_923574 [ SRS ]    NW_923574 [ ENTREZ ]
AceViewABCB1 AceView - NCBI
UnigeneHs.489033 [ SRS ]    Hs.489033 [ NCBI ]     HS489033 [ spliceNest ]
Fast-db7829 (alternative variants)
Protein : pattern, domain, 3D structure
SwissProtO60213 [ SRS]    O60213 [ EXPASY ]     O60213 [ INTERPRO ]     O60213 [ UNIPROT ]
CluSTrO60213
BlocksO60213
HPRD01370
Protein Interaction databases
DIPO60213
IntActO60213
Polymorphism : SNP, mutations, diseases
OMIM171050    [ map ]   
GENECLINICS171050
SNPABCB1 [dbSNP-NCBI]  
SNPNM_000927 [SNP-NCI]  
SNPABCB1 [GeneSNPs - Utah]  ABCB1] [HGBASE - SRS]
HAPMAPABCB1 [HAPMAP]  
HGMDABCB1
General knowledge
Family BrowserABCB1 [UCSC Family Browser]
SOURCENM_000927
SMDHs.489033
SAGEHs.489033
GOnucleotide binding [Amigo]  nucleotide binding
GOtransporter activity [Amigo]  transporter activity
GOprotein binding [Amigo]  protein binding
GOATP binding [Amigo]  ATP binding
GOmembrane fraction [Amigo]  membrane fraction
GOtransport [Amigo]  transport
GOxenobiotic-transporting ATPase activity [Amigo]  xenobiotic-transporting ATPase activity
GOcell surface [Amigo]  cell surface
GOmembrane [Amigo]  membrane
GOintegral to membrane [Amigo]  integral to membrane
GOhydrolase activity [Amigo]  hydrolase activity
GOATPase activity [Amigo]  ATPase activity
GOresponse to drug [Amigo]  response to drug
BIOCARTAMulti-Drug Resistance Factors    [Genes]
BIOCARTANuclear Receptors in Lipid Metabolism and Toxicity    [Genes]
BIOCARTAHypoxia and p53 in the Cardiovascular system    [Genes]
PubGeneABCB1
TreeFamABCB1
CTD5243 [Comparative ToxicoGenomics Database]
Other databases
Probes
ProbeABCB1 Related clones (RZPD - Berlin)
PubMed
PubMed499 Pubmed reference(s) in Entrez

Bibliography

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Molecular and cellular biology. 1989 ; 9 (1) : 109-115.
PMID 2648129
 
Multidrug resistance in acute myeloid leukemia.
Baer MR, Bloomfield CD
Journal of the National Cancer Institute. 1991 ; 83 (10) : 663-665.
PMID 2023265
 
Double minute chromosomes carrying the human multidrug resistance 1 and 2 genes are generated from the dimerization of submicroscopic circular DNAs in colchicine-selected KB carcinoma cells.
Schoenlein PV, Shen DW, Barrett JT, Pastan I, Gottesman MM
Molecular biology of the cell. 1992 ; 3 (5) : 507-520.
PMID 1611154
 
Cell biological mechanisms of multidrug resistance in tumors.
Simon SM, Schindler M
Proceedings of the National Academy of Sciences of the United States of America. 1994 ; 91 (9) : 3497-3504.
PMID 7909602
 
A YAC-based contig of 1.5 Mb spanning the human multidrug resistance gene region and delineating the amplification unit in three human multidrug-resistant cell lines.
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PMID 8593611
 
P-glycoprotein multidrug resistance and cancer.
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PMID 8876632
 
P-glycoprotein and multidrug resistance.
Gottesman MM, Pastan I, Ambudkar SV
Current opinion in genetics & development. 1996 ; 6 (5) : 610-617.
PMID 8939727
 
The MDR phenotype in hematologic malignancies: prognostic relevance and future perspectives.
Hegewisch-Becker S, Hossfeld DK
Annals of hematology. 1996 ; 72 (3) : 105-117.
PMID 8766251
 
Sequential emergence of MRP- and MDR1-gene over-expression as well as MDR1-gene translocation in homoharringtonine-selected K562 human leukemia cell lines.
Zhou DC, Ramond S, Viguie F, Faussat AM, Zittoun R, Marie JP
International journal of cancer. Journal international du cancer. 1996 ; 65 (3) : 365-371.
PMID 8575859
 
Multidrug resistance gene expression in acute myeloid leukemia: major prognosis significance for in vivo drug resistance to induction treatment.
Hunault M, Zhou D, Delmer A, Ramond S, Viguiˆ© F, Cadiou M, Perrot JY, Levy V, Rio B, Cymbalista F, Zittoun R, Marie JP
Annals of hematology. 1997 ; 74 (2) : 65-71.
PMID 9063375
 
Functional expression of MDR-1 in acute myeloid leukemia: correlation with the clinical-biological, immunophenotypical, and prognostic disease characteristics.
Martˆ‚nez A, San Miguel JF, Valverde B, Bˆ°rez A, Moro MJ, Garcˆ‚a-Marcos MA, Pˆ©rez-Simˆ„n JA, Vidriales B, Orfao A
Annals of hematology. 1997 ; 75 (3) : 81-86.
PMID 9368475
 
MDR 1 expression is an independent prognostic factor for response and survival in de novo acute myeloid leukaemia.
van den Heuvel-Eibrink MM, van der Holt B, te Boekhorst PA, Pieters R, Schoester M, Lˆwenberg B, Sonneveld P
British journal of haematology. 1997 ; 99 (1) : 76-83.
PMID 9359506
 
The prognostic significance of the expression and function of multidrug resistance transporter proteins in acute myeloid leukemia: studies of the Southwest Oncology Group Leukemia Research Program.
Willman CL
Seminars in hematology. 1997 ; 34 (4 Suppl 5) : 25-33.
PMID 9408958
 
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Contributor(s)

Written03-1998Franck Viguié

Citation

This paper should be referenced as such :
Viguié F . ABCB1. Atlas Genet Cytogenet Oncol Haematol. March 1998 .
URL : http://AtlasGeneticsOncology.org/Genes/PGY1ID105.html

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 29 18:44:00 2008


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