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SORBS2 (sorbin and SH3 domain containing 2)

Identity

Other namesARGBP2 (Arg/Abl-interacting protein 2)
FLJ93447
KIAA0777
PRO0618
HGNC (Hugo) SORBS2
Location 4q35.1
Location_base_pair Starts at 186743593 and ends at 186970404 bp from pter ( according to hg18-Mar_2006)  [Mapping]

DNA/RNA

Transcription Various transcripts.

Protein

Description The N-term region of the protein contains a sorbin homology (SoHo) domain. Sorbin, a 153 amino acid peptide, was isolated from porcine intestine (Vagne-Descroix et al., 1991). As a matter of fact, human sorbin is spliced from an alternative transcript from the SORBS2/ArgBP2 gene locus (Hand and Eiden, 2005). The sorbin homology domain is a motif for the targeting of proteins to lipid rafts (Kimura et al., 2001); 3 proteins present the SoHo domain: SORBS2/ArgBP2, SORBS1 (also called c-Cbl-associated protein (CAP), or ponsin) (10q24), and SORBS3 (vinexin) (8p21). The C-term region of the three SORBS genes contains 3 SH3 domains. The three genes share the same structural organization and present overlapping functions.
Expression Widely expressed; very abundant in heart.
Localisation Cytoplasm and nucleus (like its partner ABL1).
Function Adaptor protein.
Signaling proteins like ABL1 and ABL2 (ARG) (1q25) associate with and phosphorylate SORBS2 (Wang et al., 1997).
SORBS2 negatively regulates ABL1 and ABL2 by recruiting CBL (11q23.3) in a complex with ABL1, facilitating phosphorylation of CBL by ABL1 and promoting CBL-directed ubiquitination and degradation of ABL1 and SORBS2 in the proteasome (Soubeyran et al., 2003).
Role in AKT/PAK1 cell survival pathway: ArgBP2gamma (another SORBS2 splice) interacts with AKT and PAK1. Expression of ArgBP2gamma induces PAK1 activity and overrides apoptosis induced by ectopic expression of BAD or DNA damage (Yuan et al., 2005).
Cytoskeletal proteins: SORBS2 also binds VCL (vinculin) (10q22) a protein which plays an important role in cell adhesion and migration, and MLLT4 (also called AF6 or afadin) (6q27), another component of cell membranes at specialized sites of cell-cell contact (Kawabe et al., 1999).
SORBS2 has been found to localize at the Z-disks of cardiac myofibrils, indicating that ArgBP2 has a specialized function associated with the contractile apparatus of cardiac muscle (Wang et al., 1997). SORBS2 binds alpha actinin, an actin crosslinking protein and a major component of the Z-disks, and PALLD (palladin) (4q32), a protein associated with the alpha actinin network.
SORBS2 co-localize with ABL1 in actin stress fibers (bundles of actin filaments which appear/disappear upon stimuli) (Wang et al., 1997).
nArgBP2, a spliced form of SORB2 with a zinc finger motif in the central part of the protein, is found in the post-synaptic densities and binds DLGAP1 (SAPAP, 18p11) (Kawabe et al., 1999).
SORBS2 also interacts with SPTAN1 (alpha 2-spectrin) (9q34), another component of the membrane-associated cytoskeleton, DNM1 (9q34) and DNM2 (19p13) (dynamins) (GTPases implicated in the regulation of actin dynamics and abundantly found in the brain), WASF2 (1p36), and SYNJ2 (synaptojanin 2) (6q25), the last two undergo ubiquitination and ABL1-dependent tyrosine phosphorylation (Cestra et al., 2005).
ABL1 plays an important role in axonogenesis; ABL1 and ABL2 localize to the pre- and postsynaptic compartments of synapses.
SORBS2 binds WASF1 (also called WAVE1) (6q21) and PTPN12 (7q11). PTPN12, a protein tyrosine phosphatase, prevents SORBS2 phosphorylation by ABL1. Phosphorylation of WASF1 induced by the overexpression of ABL1 was enhanced in the presence of SORBS2, and overexpression of PTPN12 abolished the ABL1-mediated phosphorylation of WASF1 (Taieb et al., 2008).
SORBS2 inhibits adhesion and migration of pancreatic cells (Taieb et al., 2008).
Lipid rafts: SORBS2 links via its SH3 domains with proline-rich motifs of CBL and that of PTK2B (PYK2) (8p21) in a complex that is recruited to lipid rafts (via its SoHo domain) following growth factor stimulation, partially co-localizing with actin, which appears to be critical for cytoskeletal rearrangements in growing neurites (Haglund et al., 2004).
Homology SORBS1 and SORBS3.

Implicated in

Entity t(4;11)(q35;q23) in acute myeloid leukemia --> SORBS2 - MLL
Hybrid/Mutated Gene 5' MLL - 3' SORBS2
  
Entity Pancreas cancer
Oncogenesis SORBS2 is repressed during pancreas carcinogenesis and during progression of the disease. The antitumoral potential of SORBS2 appears to be linked to the control of cell adhesion and migration (inhibition of cell migration) rather than to the regulation of cell proliferation or sensitivity to apoptosis (Taieb et al., 2008).
  

External links

Nomenclature
HGNC (Hugo)SORBS2   24098
Entrez_Gene (NCBI)SORBS2  8470  sorbin and SH3 domain containing 2
Cards
AtlasSORBS2ID693ch4q35
GeneCards (Weizmann)SORBS2
Ensembl (Hinxton)ENSG00000154556 [Gene_View]  SORBS2 [Vega]
AceView (NCBI)SORBS2
Genatlas (Paris)SORBS2
euGene (Indiana)8470
SOURCE (Stanford)NM_001145670 NM_001145671 NM_001145672 NM_001145673 NM_001145674 NM_001145675 NM_003603 NM_021069
Gene Expression (Array Express) ENSG00000154556
Genomic and cartography
GoldenPath (UCSC)SORBS2  -  4q35.1   chr4:186743593-186970404 -  4q35.1   [Description]    (hg18-Mar_2006)
EnsemblSORBS2 - 4q35.1 [CytoView]
Mapping of homologs : NCBISORBS2 [Mapview]
OMIM
Gene and transcription
Gene : Genbank (Entrez)AA114994 AB018320 AF049884 AF049885 AF090937
Reference sequence (RefSeq transcript) :SRSNM_001145670 NM_001145671 NM_001145672 NM_001145673 NM_001145674 NM_001145675 NM_003603 NM_021069
Reference transcript : EntrezNM_001145670 NM_001145671 NM_001145672 NM_001145673 NM_001145674 NM_001145675 NM_003603 NM_021069
RefSeq genomic : SRSAC_000047 AC_000136 NC_000004 NT_016354 NW_001838921 NW_922217
RefSeq genomic : EntrezAC_000047 AC_000136 NC_000004 NT_016354 NW_001838921 NW_922217
Consensus coding sequences : CCDS NCBISORBS2
Cluster EST : UnigeneHs.655143 [ SRS ] Hs.655143 [ NCBI ]
Alternative Splicing : Fast-db (Paris)11683
Protein : pattern, domain, 3D structure
Protein : UniProt/SwissProtO94875 (SRS) O94875 (Expasy) O94875 (Uniprot)
With graphics : InterProO94875
Splice isoforms : VarSplice FASTAO94875(VarSplice FASTA)
Domaine pattern : Prosite (SRS)SH3 (PS50002)    SOHO (PS50831)   
Domain pattern : Prosite (Expaxy)SH3 (PS50002)    SOHO (PS50831)   
Domains : Interpro (SRS)Neu_cyt_fact_2    SH3_2    SH3_domain    SH3_region    Sorb    Znf_C2H2   
Domains : Interpro (EBI)Neu_cyt_fact_2    SH3_2    SH3_domain    SH3_region    Sorb    Znf_C2H2   
Related proteins : CluSTrO94875
Domain families : Pfam SRSSH3_1 (PF00018)    SH3_2 (PF07653)    Sorb (PF02208)   
Domain families : Pfam SangerSH3_1 (PF00018)    SH3_2 (PF07653)    Sorb (PF02208)   
Domain families : Pfam NCBIpfam00018    pfam07653    pfam02208   
Domain families : Smart EMBLSH3 (SM00326)  Sorb (SM00459)  
Blocks (Seattle)O94875
Crystal structure of protein : PDB SRS
Crystal structure of protein : PDBSum
Crystal structure of protein : IMB
Crystal structure of protein : PDB RSDB
HPRD12473
Protein Interaction databases
DIP (DOE-UCLA)O94875
IntAct (EBI)O94875
Polymorphism : SNP, mutations, diseases
Single Nucleotide Polymorphism (SNP) : dbSNP NCBISORBS2
SNP : GeneSNP UtahSORBS2
SNP : HGBaseSORBS2
Genetic variants : HAPMAPSORBS2
Somatic Mutations in Cancer : COSMICSORBS2 
Translocation Breakpoints in Cancer : TICdbSORBS2 
Mutations and Diseases : HGMDSORBS2
Hereditary diseases : OMIM
Hereditary diseases : GENETests
Diseases : Genetic AssociationSORBS2
General knowledge
Homologs : HomoloGeneSORBS2
Homology/Alignments : Family Browser UCSCSORBS2
Phylogenetic Trees/Animal Genes : TreeFamSORBS2
Chemical/Protein Interactions : CTD8470
Keywords Ontology : AmiGOstructural constituent of cytoskeleton  protein binding  intracellular  nucleus  cytoplasm  cytoskeletal adaptor activity  biological_process  zinc ion binding  structural constituent of muscle  actin cytoskeleton  Z disc  perinuclear region of cytoplasm  
Keywords Ontology : EGO-EBIstructural constituent of cytoskeleton  protein binding  intracellular  nucleus  cytoplasm  cytoskeletal adaptor activity  biological_process  zinc ion binding  structural constituent of muscle  actin cytoskeleton  Z disc  perinuclear region of cytoplasm  
Pathways : BIOCARTA
Pathways : KEGG
Other databases
Probes
Probes : ImagenesSORBS2 Related clones (RZPD - Berlin)
Literature
PubMed31 Pubmed reference(s) in Entrez
PubGeneSORBS2

Bibliography

Isolation and characterisation of porcine sorbin.
Vagne-Descroix M, Pansu D, Jornvall H, Carlquist M, Guignard H, Jourdan G, Desvigne A, Collinet M, Caillet C, Mutt V.
Eur J Biochem. 1991 Oct 1;201(1):53-9.
PMID 1915377
 
ArgBP2, a multiple Src homology 3 domain-containing, Arg/Abl-interacting protein, is phosphorylated in v-Abl-transformed cells and localized in stress fibers and cardiocyte Z-disks.
Wang B, Golemis EA, Kruh GD.
J Biol Chem. 1997 Jul 11;272(28):17542-50.
PMID 921190
 
nArgBP2, a novel neural member of ponsin/ArgBP2/vinexin family that interacts with synapse-associated protein 90/postsynaptic density-95-associated protein (SAPAP).
Kawabe H, Hata Y, Takeuchi M, Ide N, Mizoguchi A, Takai Y.
J Biol Chem. 1999 Oct 22;274(43):30914-8.
PMID 10521485
 
The sorbin homology domain: a motif for the targeting of proteins to lipid rafts.
Kimura A, Baumann CA, Chiang SH, Saltiel AR.
Proc Natl Acad Sci U S A. 2001 Jul 31;98(16):9098-103.
PMID 11481476
 
Vinexin, CAP/ponsin, ArgBP2: a novel adaptor protein family regulating cytoskeletal organization and signal transduction.
Kioka N, Ueda K, Amachi T.
Cell Struct Funct. 2002 Feb;27(1):1-7. (Review)
PMID 11937713
 
Cbl-ArgBP2 complex mediates ubiquitination and degradation of c-Abl.
Soubeyran P, Barac A, Szymkiewicz I, Dikic I.
Biochem J. 2003 Feb 15;370(Pt 1):29-34.
PMID 12475393
 
Recruitment of Pyk2 and Cbl to lipid rafts mediates signals important for actin reorganization in growing neurites.
Haglund K, Ivankovic-Dikic I, Shimokawa N, Kruh GD, Dikic I.
J Cell Sci. 2004 May 15;117(Pt 12):2557-68.
PMID 15128873
 
How do Abl family kinases regulate cell shape and movement?
Hernandez SE, Krishnaswami M, Miller AL, Koleske AJ.
Trends Cell Biol. 2004 Jan;14(1):36-44. (Review)
PMID 14729179
 
The Abl/Arg substrate ArgBP2/nArgBP2 coordinates the function of multiple regulatory mechanisms converging on the actin cytoskeleton.
Cestra G, Toomre D, Chang S, De Camilli P.
Proc Natl Acad Sci U S A. 2005 Feb 1;102(5):1731-6.
PMID 15659545
 
Human sorbin is generated via splicing of an alternative transcript from the ArgBP2 gene locus.
Hand D, Eiden LE.
Peptides. 2005 Jul;26(7):1278-82.
PMID 15949647
 
Involvement of palladin and alpha-actinin in targeting of the Abl/Arg kinase adaptor ArgBP2 to the actin cytoskeleton.
Ronty M, Taivainen A, Moza M, Kruh GD, Ehler E, Carpen O.
Exp Cell Res. 2005 Oct 15;310(1):88-98.
PMID 16125169
 
ArgBP2gamma interacts with Akt and p21-activated kinase-1 and promotes cell survival.
Yuan ZQ, Kim D, Kaneko S, Sussman M, Bokoch GM, Kruh GD, Nicosia SV, Testa JR, Cheng JQ.
J Biol Chem. 2005 Jun 3;280(22):21483-90.
PMID 15784622
 
ArgBP2, encoding a negative regulator of ABL, is fused to MLL in a case of infant M5 acute myeloid leukemia involving 4q35 and 11q23.
Pession A, Lo Nigro L, Montemurro L, Serravalle S, Fazzina R, Izzi G, Nucifora G, Slany R, Tonelli R.
Leukemia. 2006 Jul;20(7):1310-3.
PMID 16628191
 
ArgBP2-dependent signaling regulates pancreatic cell migration, adhesion, and tumorigenicity.
Taieb D, Roignot J, Andre F, Garcia S, Masson B, Pierres A, Iovanna JL, Soubeyran P.
Cancer Res. 2008 Jun 15;68(12):4588-96.
PMID 18559503
 
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Contributor(s)

Written08-2008Jean-Loup Huret
Genetics, Dept Medical Information, University of Poitiers; CHU Poitiers Hospital, F-86021 Poitiers, France

Citation

This paper should be referenced as such :
Huret JL . SORBS2 (sorbin and SH3 domain containing 2). Atlas Genet Cytogenet Oncol Haematol. August 2008 .
URL : http://AtlasGeneticsOncology.org/Genes/SORBS2ID693ch4q35.html

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Feb 6 13:37:40 CET 2010

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