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TP53INP1 (tumor protein p53 inducible nuclear protein 1)

Identity

Other namesSIP
TEAP
p53DINP1
TP53INP1A
TP53INP1B
TP53DINP1
HGNC (Hugo) TP53INP1
Location 8q22.1
Location_base_pair Starts at 96007377 and ends at 96030791 bp from pter ( according to hg18-Mar_2006)  [Mapping]
 

DNA/RNA

 
  Green boxes: exons, black lines: introns, alternative splicing for TP53INP1beta in black and TP53INP1alpha in red.
Description Gene is ~24 kb, with 5 exons.
Transcription Alternative splicing: 2 transcripts: TP53INP1alpha (exons 1, 2, 3, 4 and 5 with a stop codon in the fourth exon) and TP53INP1beta (exons 1, 2, 3 and 5 with a stop codon in the fifth exon).

Protein

Description 2 isoforms: TP53INP1alpha, 18kDa (164 amino acids) and TP53INP1beta, 27kDa (240 amino acids). Both isoforms contain a PEST domain (sequence rich in proline, glutamic acid, serine and threonine between amino acids 26 and 62 found in proteins with half-lives of less than 2 h).
Expression In mouse: TP53INP1 is expressed in thymus, spleen and bone marrow. It is also expressed at low levels in heart, stomach, liver, intestine, testis, kidney and pancreas. TP53INP1 expression is highly induced during the acute phase of mouse experimental pancreatitis (caerulein induced).
In cells lines: TP53INP1 is transcriptionally induced in response to stress in a p53-dependent and independent manner. Examples: in mouse fibroblast, it is induced upon adriamycin, methylmethane sulfonate, ethanol, H2O2, UV exposure and heat shock treatment; in neuronal cells by copper treatment; in pancreatic cancer cell lines by gemcitabine; in pro-B cells by IL-3 deprivation or treatement with staurosporine, cisplatin, camptothecin, methotrexate and paclitaxel; in mouse embryonic fibroblast (MEF), human fibroblasts and MCF7 by gamma irradiation; in melanoma cells by UV mimetic compound (4NQ).
TP53INP1 expression is regulated by different transcriptional regulators: p53, E2F1, p73 (in p53-/- cells), myc (in neuroblastoma cell lines) and PLZF (in hematopoietic cell lines).
Localisation Nuclear when over-expressed and in PML-bodies (Promyelocytic leukemia protein) upon PML-IV over-expression.
Function TP53INP1 is a tumor suppressor gene induced with different stress conditions. TP53INP1 overexpression leads to cell cycle arrest (G1 phase) and p53-dependent or independent apoptosis. TP53INP1 interacts with p53 and two kinases (HIPK2, and PKCd). These kinases phosphorylate p53 on serine 46 modifying the p53 activity. TP53INP1 can modulate the p53 and p73 transcriptional activity to potentiate pro-apoptotic pathways. Colitis and colitis-associated cancer are exacerbated in mice deficient for TP53INP1.
Homology TP53INP1 is conserved between species (from fly to human). In vertebrates, one paralog has been identified, TP53INP2 localized on chromosome 20q11.2. TP53INP2 is involved in autophagy.

Mutations

Note No mutation identified.

Implicated in

Entity Pancreatic Adenocarcinoma
Note TP53INP1 is lost early during pancreatic cancer progression (from the neoplasia stages PanIN2). This downregulation seems to be important for tumour development. TP53INP1 expression is down regulated by the oncogenic micro-RNA miR-155 during pancreatic cancer progression.
Disease Sporadic cancer, very aggressive, epigenetic disease with known mutations/deletions of p53, K-Ras, SMAD4, p16, BRCA2, EGFR and HER2.
Prognosis Very bad, with only 20% of patients reaching two years of survival, and 3% after 5 years.
  
Entity Breast cancer
Note TP53INP1 expression is lost during breast cancer development.
Disease Mainly in female (only 1% in male). Genetic disorders known: loss of HER2 and ER expression, mutations in p53 and BRCA1.
Prognosis Mortality rate: 25%.
  
Entity Gastric cancer
Note TP53INP1 expression is lost during cancer development. The decreased expression of TP53INP1 protein may reflect the malignant grade of gastric cancer.
Disease 10% are familial. Mutations in APC, p53, Bcl-2.
Prognosis The 5-year survival after surgical resection is 30-50% for patients with stage II and 10-25% for patients with stage III.
  
Entity Anaplastic carcinoma of the thyroid (ATC)
Note TP53INP1 is overexpressed in anaplastic thyroid carcinoma.
Disease ATC is less than 2% of total thyroid cancer but represents 40% of death by thyroid cancer. It is a very aggressive cancer with early dissemination.
Prognosis 5-year survival rate is less than 10%.
  

External links

Nomenclature
HGNC (Hugo)TP53INP1   18022
Entrez_Gene (NCBI)TP53INP1  94241  tumor protein p53 inducible nuclear protein 1
Cards
AtlasTP53INP1ID42672ch8q22
GeneCards (Weizmann)TP53INP1
Ensembl (Hinxton)ENSG00000164938 [Gene_View]  TP53INP1 [Vega]
AceView (NCBI)TP53INP1
Genatlas (Paris)TP53INP1
euGene (Indiana)94241
SOURCE (Stanford)NM_001135733 NM_033285
Gene Expression (Array Express) ENSG00000164938
Genomic and cartography
GoldenPath (UCSC)TP53INP1  -  8q22.1   chr8:96007377-96030791 -  8q22   [Description]    (hg18-Mar_2006)
EnsemblTP53INP1 - 8q22 [CytoView]
Mapping of homologs : NCBITP53INP1 [Mapview]
OMIM606185   
Gene and transcription
Gene : Genbank (Entrez)AB017926 AB017927 AF409114 AF409115 AK025792
Reference sequence (RefSeq transcript) :SRSNM_001135733 NM_033285
Reference transcript : EntrezNM_001135733 NM_033285
RefSeq genomic : SRSAC_000051 AC_000140 NC_000008 NT_008046 NW_001839136 NW_923984
RefSeq genomic : EntrezAC_000051 AC_000140 NC_000008 NT_008046 NW_001839136 NW_923984
Consensus coding sequences : CCDS NCBITP53INP1
Cluster EST : UnigeneHs.492261 [ SRS ] Hs.492261 [ NCBI ]
Alternative Splicing : Fast-db (Paris)6938
Protein : pattern, domain, 3D structure
Protein : UniProt/SwissProtQ96A56 (SRS) Q96A56 (Expasy) Q96A56 (Uniprot)
With graphics : InterProQ96A56
Splice isoforms : VarSplice FASTAQ96A56(VarSplice FASTA)
Related proteins : CluSTrQ96A56
Domain families : Pfam SRS
Domain families : Pfam Sanger
Domain families : Pfam NCBI
Blocks (Seattle)Q96A56
Crystal structure of protein : PDB SRS
Crystal structure of protein : PDBSum
Crystal structure of protein : IMB
Crystal structure of protein : PDB RSDB
HPRD09367
Protein Interaction databases
DIP (DOE-UCLA)Q96A56
IntAct (EBI)Q96A56
Polymorphism : SNP, mutations, diseases
Single Nucleotide Polymorphism (SNP) : dbSNP NCBITP53INP1
SNP : GeneSNP UtahTP53INP1
SNP : HGBaseTP53INP1
Genetic variants : HAPMAPTP53INP1
Somatic Mutations in Cancer : COSMICTP53INP1 
Mutations and Diseases : HGMDTP53INP1
Hereditary diseases : OMIM606185   
Hereditary diseases : GENETests606185   
Diseases : Genetic AssociationTP53INP1
General knowledge
Homologs : HomoloGeneTP53INP1
Homology/Alignments : Family Browser UCSCTP53INP1
Phylogenetic Trees/Animal Genes : TreeFamTP53INP1
Chemical/Protein Interactions : CTD94241
Keywords Ontology : AmiGOnucleus  apoptosis  induction of apoptosis  response to stress  cell cycle arrest  
Keywords Ontology : EGO-EBInucleus  apoptosis  induction of apoptosis  response to stress  cell cycle arrest  
Pathways : BIOCARTA
Pathways : KEGG
Other databases
Probes
Probes : ImagenesTP53INP1 Related clones (RZPD - Berlin)
Literature
PubMed16 Pubmed reference(s) in Entrez
PubGeneTP53INP1

Bibliography

p53DINP1, a p53-inducible gene, regulates p53-dependent apoptosis.
Okamura S, Arakawa H, Tanaka T, Nakanishi H, Ng CC, Taya Y, Monden M, Nakamura Y.
Mol Cell. 2001 Jul;8(1):85-94.
PMID 11511362
 
Assignment of tumor protein p53 induced nuclear protein 1 (TP53INP1) gene to human chromosome band 8q22 by in situ hybridization.
Nowak J, Tomasini R, Mattei MG, Azizi Samir LA, Dagorn JC, Dusetti N, Iovanna JL, Pebusque MJ.
Cytogenet Genome Res. 2002;97(1-2):140E.
PMID 12438758
 
P53-dependent expression of the stress-induced protein (SIP).
Tomasini R, Samir AA, Pebusque MJ, Calvo EL, Totaro S, Dagorn JC, Dusetti NJ, Iovanna JL.
Eur J Cell Biol. 2002 May;81(5):294-301.
PMID 12067065
 
TP53INP1s and homeodomain-interacting protein kinase-2 (HIPK2) are partners in regulating p53 activity.
Tomasini R, Samir AA, Carrier A, Isnardon D, Cecchinelli B, Soddu S, Malissen B, Dagorn JC, Iovanna JL, Dusetti NJ.
J Biol Chem. 2003 Sep 26;278(39):37722-9. Epub 2003 Jul 7.
PMID 12851404
 
Novel link between E2F and p53: proapoptotic cofactors of p53 are transcriptionally upregulated by E2F.
Hershko T, Chaussepied M, Oren M, Ginsberg D.
Cell Death Differ. 2005 Apr;12(4):377-83.
PMID 15706352
 
TP53INP1 is a novel p73 target gene that induces cell cycle arrest and cell death by modulating p73 transcriptional activity.
Tomasini R, Seux M, Nowak J, Bontemps C, Carrier A, Dagorn JC, Pebusque MJ, Iovanna JL, Dusetti NJ.
Oncogene. 2005 Dec 8;24(55):8093-104.
PMID 16044147
 
Expression profiling of p53-target genes in copper-mediated neuronal apoptosis.
Vanlandingham JW, Tassabehji NM, Somers RC, Levenson CW.
Neuromolecular Med. 2005;7(4):311-24.
PMID 16391388
 
Decreased expression of tumor protein p53-induced nuclear protein 1 (TP53INP1) in breast carcinoma.
Ito Y, Motoo Y, Yoshida H, Iovanna JL, Takamura Y, Miya A, Kuma K, Miyauchi A.
Anticancer Res. 2006 Nov-Dec;26(6B):4391-5.
PMID 17201159
 
High level of tumour protein p53-induced nuclear protein 1 (TP53INP1) expression in anaplastic carcinoma of the thyroid.
Ito Y, Motoo Y, Yoshida H, Iovanna JL, Nakamura Y, Kuma K, Miyauchi A.
Pathology. 2006 Dec;38(6):545-7.
PMID 17393983
 
Down-expression of tumor protein p53-induced nuclear protein 1 in human gastric cancer.
Jiang PH, Motoo Y, Garcia S, Iovanna JL, Pebusque MJ, Sawabu N.
World J Gastroenterol. 2006 Feb 7;12(5):691-6.
PMID 16521180
 
Effect of gemcitabine on the expression of apoptosis-related genes in human pancreatic cancer cells.
Jiang PH, Motoo Y, Sawabu N, Minamoto T.
World J Gastroenterol. 2006 Mar 14;12(10):1597-602.
PMID 16570353
 
Microarray analysis of radiation response genes in primary human fibroblasts.
Kis E, Szatmari T, Keszei M, Farkas R, Esik O, Lumniczky K, Falus A, Safrany G.
Int J Radiat Oncol Biol Phys. 2006 Dec 1;66(5):1506-14. Epub 2006 Oct 25.
PMID 17069989
 
Cell cycle regulation targets of MYCN identified by gene expression microarrays.
Bell E, Lunec J, Tweddle DA.
Cell Cycle. 2007 May 15;6(10):1249-56. Epub 2007 May 1.
PMID 17495526
 
Identification of apoptosis-related PLZF target genes.
Bernardo MV, Yelo E, Gimeno L, Campillo JA, Parrado A.
Biochem Biophys Res Commun. 2007 Jul 27;359(2):317-22. Epub 2007 May 24.
PMID 17537403
 
Tumor protein 53-induced nuclear protein 1 expression is repressed by miR-155, and its restoration inhibits pancreatic tumor development.
Gironella M, Seux M, Xie MJ, Cano C, Tomasini R, Gommeaux J, Garcia S, Nowak J, Yeung ML, Jeang KT, Chaix A, Fazli L, Motoo Y, Wang Q, Rocchi P, Russo A, Gleave M, Dagorn JC, Iovanna JL, Carrier A, Pebusque MJ, Dusetti NJ.
Proc Natl Acad Sci U S A. 2007 Oct 9;104(41):16170-5. Epub 2007 Oct 2.
PMID 17911264
 
Colitis and colitis-associated cancer are exacerbated in mice deficient for tumor protein 53-induced nuclear protein 1.
Gommeaux J, Cano C, Garcia S, Gironella M, Pietri S, Culcasi M, Pebusque MJ, Malissen B, Dusetti N, Iovanna J, Carrier A.
Mol Cell Biol. 2007 Mar;27(6):2215-28. Epub 2007 Jan 22.
PMID 17242209
 
Tumor protein 53-induced nuclear protein 1 is a major mediator of p53 antioxidant function.
Cano CE, Gommeaux J, Pietri S, Culcasi M, Garcia S, Seux M, Barelier S, Vasseur S, Spoto RP, Pebusque MJ, Dusetti NJ, Iovanna JL, Carrier A.
Cancer Res. 2009 Jan 1;69(1):219-26.
PMID 19118006
 
The TP53INP2 protein is required for autophagy in mammalian cells.
Nowak J, Archange C, Tardivel-Lacombe J, Pontarotti P, Pebusque MJ, Vaccaro MI, Velasco G, Dagorn JC, Iovanna JL.
Mol Biol Cell. 2009 Feb;20(3):870-81. Epub 2008 Dec 3.
PMID 19056683
 
TP53INP2 is the new guest at the table of self-eating.
Nowak J, Iovanna JL.
Autophagy. 2009 Apr;5(3):383-4. Epub 2009 Apr 23.
PMID 19145107
 
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written04-2009Mylène Seux, Alice Carrier, Juan Iovanna, Nelson Dusetti
INSERM U.624, Parc Scientifique de Luminy, Case 915, 13288 Marseille Cedex 9, France

Citation

This paper should be referenced as such :
Seux M, Carrier A, Iovanna J, Dusetti N . TP53INP1 (tumor protein p53 inducible nuclear protein 1). Atlas Genet Cytogenet Oncol Haematol. April 2009 .
URL : http://AtlasGeneticsOncology.org/Genes/TP53INP1ID42672ch8q22.html

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indexed on : Sat Feb 27 10:54:02 CET 2010

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