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Chromosome 10

Chromosome 10 : G-banding, diagram and R-banding - Claude Léonard, Jean-Loup Huret
Chromosome 10 diagrams ISCN 2009 - Courtesy Nicole Chia

Leukaemia     

t(4;10)(q12;p11) KIF5B/PDGFRA
t(5;10)(q33;q21) CCDC6/PDGFB
t(7;10)(q34;q24) TRD/TLX1
t(9;10)(q34;q22) ZMIZ1/ABL1
t(X;10)(p10;p10)
t(10;11)(p13;q21) PICALM/MLLT10
t(10;11)(p12;q23) KMT2A/MLLT10
t(10;11)(p11.2;q23) KMT2A/ABI1
t(10;11)(q22;q23) KMT2A/TET1
t(10;11)(q25;p15) NUP98/ADD3
t(10;12)(q24;p13) ETV6/GOT1
t(10;14)(q24;q11) TRD/TLX1
t(10;16)(q22;p13) KAT6B/CREBBP
t(10;17)(p15;q21) ZMYND11/MBTD1

Solid Tumors     

inv(10)(q11q11) RET/NCOA4
inv(10)(q11q11) NCOA4/RET
inv(10)(q11q21) CCDC6/RET
t(1;10)(p22;q24) FGF8
t(1;10)(p22;q24) FGF8
t(6;10)(p21;q22) HMGA1
t(10;17)(q11;q24) PRKAR1A/RET
t(10;17)(q22;p13) YWHAE/NUTM2E

Cancer prone diseases     

Bannayan-Riley-Ruvalcaba syndrome
Cowden disease
Familial Juvenile Polyposis Syndrome
Hereditary breast cancer
Lhermitte-Duclos disease
Proteus syndrome

All Genes by Location (Kb)

Chromosome 10 by location

Losses / Amplicons     

BONE/SOFT TISSUE



External links     

  • Chromosome 10 - HUGO Chromosomes
  • Chromosome 10 - GoldenPath - Santa Cruz
  • Chromosome 10 - Ensembl Project
  • Chromosome 10 - Map View - NCBI
  • Chromosome 10 - OMIM Gene map
  • Chromosome 10 - Genomic Variants
  • Chromosome 10 - HAPMAP Project
  • Chromosome 10 - Genome Channel - ORNL
  • Chromosome 10 - LaunchPad HGMIS
  • Chromosome 10 - Human Protein Atlas
  • Chromosome 10 - Array BAC clone - Roswell Park Cancer Institute
  • Chromosome 10 - Human BAC Resource (NCBI)
  • Chromosome 10 FISH-mapped BACs (CCAP)
  • Genetic Maps (CHLC)
  • YACs mapped by FISH (Bari)
  • PCP (Partial Chromosome Paints) (Bari)
  • Mouse homology - OMIM - NCBI
  • Chromosome 10 Cancer GeneWeb
  • Human Proteomics Initiative (UniProt)
  • Cytogenetic marker FISH (Abbott)
  • FISH Probes DAKO
  • SureFISH Probes
  • CytoCell
  • Kreatech Diagnostic/

  • Genes

    Annotated genes
    Ordered by Name Ordered by Location
     Kb pter-qter
    ABI1 27035.525 10p12.1
    ADAM12 127700.954 10q26
    ADD3 111767.711 10q25.2
    AFAP1L2 116054.583 10q26.11
    AIFM2 71872.023 10q22.2
    AKR1C3 5090.958 10p15-p14
    ALOX5 45869.624 10q11.2
    ARID5B 63808.970 10q11.22
    BAG3 121410.882 10q25.2-q26.2
    BLNK 97951.455 10q23.2-q23.33
    BMI1 22610.139 10p13
    BNIP3 133781.204 10q26.3
    BTRC 103113.790 10q24.32
    CCDC6 61548.506 10q21.2
    CELF2 11206.993 10p13
    DDIT4 74033.677 10q22.1
    DKK1 54074.041 10q11.2
    DMBT1 124320.181 10q25.3-q26.1
    EIF3A 120794.541 10q26.11
    ERCC6 50662.526 10q11
    FGF8 103529.887 10q25-q26
    FGFR2 123237.844 10q25.3-q26
    GATA3 8096.667 10p15
    HELLS 96305.524 10q24.2
    HTRA1 124221.041 10q26.3
    KAT6B 76586.171 10q22.2
    KLF6 3818.188 10p15
    KLLN 89618.918 10q23
    LDB1 103867.325 10q24-q25
    LGI1 95517.566 10q24
    LOXL4 100007.443 10q24
    MAPK8 49514.682 10q11
    MIR107 91352.504 10q23.31
    MIR146B 104196.269 10q24.32
    MKI67 129894.925 10q26.2
    MLLT10 21823.574 10p12
    MRC1 17851.342 10p13
    MXI1 111969.989 10q24-q25
    NCOA4 51565.108 10q11.2
    NET1 5454.514 10p15
    NFKB2 104154.335 10q24
    PAX2 102505.468 10q24.31
    PDCD4 112631.553 10q24
    PFKFB3 6186.843 10p15.1
    PSAP 73576.055 10q21-q22
    PTEN 89623.195 10q23
    RET 43572.517 10q11.2
    RHOBTB1 62629.198 10q22.1
    SIRT1 69644.939 10q21
    SNCG 88718.288 10q23.2-q23.3
    TACC2 123748.689 10q26
    Other genes
    possibly implicated
    in cancer
    Ordered by Name Ordered by Location
     Kb pter-qter
    ABCC2 101542.355 10q24
    ABLIM1 116190.869 10q25
    ACSL5 114135.956 10q25.1-q25.2
    ACTA2 90694.831 10q23.31
    ACTR1A 104238.986 10q24
    ADAM8 135075.920 10q26.3
    ADAMTS14 72432.559 10q21
    ADIRF 88728.188 10q23.31
    ADK 75936.247 10q22.2
    ADRB1 115803.806 10q25.3
    AKR1C1 5005.454 10p15-p14
    AKR1C2 5042.103 10p15-p14
    AKR1E2 4868.369 10p15.2
    ANK3 61786.056 10q21
    ANKRD1 92671.857 10q23.33
    ANKRD2 99332.198 10q23
    ANKRD30A 37414.785 10p11.21
    ANXA11 81914.880 10q22.3
    ANXA7 75135.189 10q22.2
    ANXA8 48255.204 10q11.22
    ANXA8L1 47746.850 10q11.22
    APBB1IP 26727.266 10p12.1
    ARHGAP12 32094.326 10p11.22
    ARHGAP19 98981.930 10q24.2
    ARHGAP21 24872.538 10p12.31
    ARHGAP22 49654.068 10q11.23
    ARL3 104433.484 10q23.3
    ARMC3 23216.953 10p12.31
    AS3MT 104629.210 10q24.33
    ASAH2 51947.000 10q11.23
    ASCC1 73855.790 10q22.1
    BAMBI 28966.424 10p12.3-p11.2
    BCCIP 127512.104 10q26.2
    BLOC1S2 102033.035 10q24.31
    BMPR1A 88516.396 10q22.3
    BTAF1 93683.736 10q22-q23
    BUB3 124913.760 10q24
    C10orf2 102747.293 10q24
    C10orf54 73507.314 10q22.1
    C10orf90 128113.574 10q26.2
    CACUL1 120440.494 10q26.13
    CALML5 5540.658 10p15.1
    CAMK1D 12391.583 10p13
    CAMK2G 75572.259 10q22
    CASC10 21783.421 10p12.31
    CASP7 115439.428 10q25
    CCAR1 70480.901 10q22.1
    CCDC7 32735.010 10p11.23
    CCNJ 97803.159 10q23.33
    CCNY 35625.802 10p11.22
    CCSER2 86088.345 10q23.1
    CDH23 73156.691 10q22.1
    CDK1 62538.089 10q21.2
    CDNF 14861.251 10p13
    CEP55 95256.369 10q24.1
    CHAT 50822.083 10q11.2
    CHST15 125767.182 10q26
    CHUK 101948.124 10q24-q25
    CISD1 60028.862 10q21.3
    COL17A1 105791.046 10q24.3
    COX15 101468.505 10q24
    CPN1 101802.065 10q24.2
    CREM 35415.769 10p12.1-p11.1
    CSTF2T 53455.246 10q11
    CTBP2 126676.418 10q26.13
    CTNNA3 67672.276 10q21
    CUEDC2 104183.002 10q24.32
    CUL2 35297.479 10p11.2
    CUZD1 124591.671 10q26.13
    CXCL12 44865.601 10q11.1
    CYP17A1 104590.288 10q24.3
    CYP26A1 94833.647 10q23-q24
    CYP2C18 96443.251 10q24
    CYP2C19 96522.463 10q24
    CYP2C8 96796.529 10q24.1
    CYP2C9 96698.415 10q24.1
    CYP2E1 135340.867 10q26.3
    DCLRE1A 115594.483 10q25.1
    DCLRE1C 14946.610 10p13
    DDX21 70716.196 10q21
    DHX32 127524.909 10q26.11-q26.2
    DLG5 79550.549 10q23
    DMBT1P1 124516.210 10q26.13
    DNA2 70173.821 10q21.3-q22.1
    DNAJB12 74092.588 10q22
    DNAJC1 22045.477 10p11.23
    DNAJC12 69556.427 10q21.3
    DNAJC9 75002.582 10q22.3
    DNMBP 101635.334 10q24.31
    DNTT 98064.085 10q23-q24
    DOCK1 128593.978 10q26.13-q26.3
    DUSP5 112257.625 10q25
    DUX4L1 135480.558 4q35.2
    EBF3 131633.496 10q26.3
    ECD 74894.282 10q22.3
    ECHS1 135175.987 10q26.2-q26.3
    EGR2 64571.756 10q21.1
    EIF4EBP2 72163.861 10q21-q22
    EMX2 119301.956 10q26.11
    ENTPD1 97471.536 10q23.1-q24.1
    EPC1 32556.644 10p11
    FAM107B 14560.556 10p14
    FAM13C 61005.889 10q21
    FAM188A 15820.175 10p13
    FAS 90750.288 10q24.1
    FBXO18 5931.535 10p15.1
    FFAR4 95326.422 10q23.33
    FRAT1 99079.022 10q24.1
    FRAT2 99092.254 10q23-q24.1
    FRMD4A 13685.706 10p14
    FUT11 75532.049 10q22.3
    FZD8 35927.177 10p11.2
    GAD2 26505.236 10p13-p11.2
    GDF10 48425.788 10q11.22
    GDF2 48413.092 10q11.22
    GDI2 5807.186 10p15
    GFRA1 117816.442 10q25-q26
    GHITM 85899.185 10q23.1
    GLRX3 131934.639 10q26
    GLUD1 88809.959 10q23.2
    GOT1 101156.627 10q24.1-q25.1
    GPAM 113909.622 10q25.3
    GPR158 25464.290 10p12.31
    GPR26 125425.871 10q26.2-q26.3
    GRID1 87359.312 10q22
    GSTO1 106014.468 10q25.1
    GSTO2 106028.631 10q25.1
    GTPBP4 1034.349 10p15-p14
    H2AFY2 71812.357 10q22.1
    HECTD2 93170.042 10
    HERC4 69681.656 10
    HHEX 94449.681 10q23.33
    HIF1AN 102295.641 10q24
    HK1 71078.603 10q22
    HNRNPA3P1 44282.860 10q11.21
    HNRNPF 43881.065 10q11.21
    HPS6 103825.124 10q24.32
    HPSE2 100216.834 10q23-q24
    HSPA12A 118430.703 10q25.3
    HSPA14 14880.159 10p13
    IDE 94211.441 10q23-q25
    IFIT1 91152.303 10q23.31
    IFIT2 91061.706 10q23.31
    IFIT3 91092.236 10q23.31
    IL15RA 5994.334 10p15.1
    IL2RA 6052.657 10p15-p14
    INA 105036.920 10q24
    INPP5A 134351.353 10q26.3
    INPP5F 121578.769 10q26.13
    ITGA8 15555.948 10p13
    ITGB1 33189.246 10p11.2
    ITIH2 7745.236 10p14
    ITIH5 7613.368 10p14
    JMJD1C 64926.981 10q22.1
    KAZALD1 102820.999 10q24.32
    KCNK18 118957.000 10q26.11
    KCNMA1 78629.359 10q22
    KIAA1217 23983.675 10p12.31
    KIF11 94352.825 10q24.1
    KIF5B 32297.938 10p11.22
    KIN 7792.925 10p15-p14
    KNDC1 134973.971 10q26.3
    LBX1 102986.733 10q24.32
    LCOR 98592.017 10q24
    LDB3 88428.426 10q22.3-q23.2
    LIPF 90424.146 10q23
    LZTS2 102756.864 10q24
    MAP3K8 30722.950 10p11.2
    MARCH5 94050.920 10q23.32-q23.33
    MARCH8 45950.033 10q11.22
    MARVELD1 99473.465 10q24.2
    MASTL 27443.753 10p12.1
    MAT1A 82031.576 10q22
    MBL2 54525.140 10q11.2
    MCM10 13203.554 10p13
    MCMBP 121588.916 10q26.13
    MCU 74451.889 10q22.2
    MGEA5 103544.200 10q24.1-q24.3
    MGMT 131265.454 10q26
    MICU1 74127.084 10q22.1
    MINPP1 89264.223 10q23
    MIR1256 74119.698 1
    MIR1287 100154.975 10q24.2
    MIR1915 21785.491 10p12.31
    MIR202 135061.015 10q26.3
    MIR511 17887.107 10p12.33
    MIR511-1 17887.107 10p12.33
    MIR603 24564.614 10
    MIR605 53059.333 10q21.1
    MIR608 102734.742 10q24.31
    MIR938 29891.193 10p11.23
    MMP21 127455.027 10q26.3
    MMRN2 88695.298 10q23.31
    MMS19 99218.081 10q24-q25
    MSMB 51549.553 10q11.2
    MSRB2 23384.427 10p12
    MYO3A 26223.002 10p11.1
    MYOF 95066.186 10q24
    MYPN 69865.874 10q22.1
    NANOS1 120789.228 10q26.13
    NDST2 75561.669 10q22
    NDUFB8 102283.486 10q24.31
    NEBL 21068.903 10p12
    NEURL1 105253.735 10q25.1
    NEUROG3 71331.791 10q21.3
    NKX2-3 101292.690 10
    NMT2 15147.771 10p13
    NOC3L 96092.989 10q23.33
    NODAL 72191.692 10q22.1
    NOLC1 103911.933 10q24.32
    NPSA 52364.586 -
    NRG3 83635.070 10q22-q23
    NRP1 33486.547 10p12
    NSMCE4A 123716.603 10q26.13
    NT5C2 104847.774 10q24.32
    OGDHL 50942.687 10
    OLAH 15085.895 10p13
    OPTN 13142.082 10p14
    P4HA1 74766.980 10q21.3-q23.1
    PAOX 135192.741 10q26.3
    PAPSS2 89419.476 10q24
    PARD3 34398.488 10p11.22
    PARG 51026.325 10q11.23
    PBLD 70044.838 10q21.3
    PCGF5 92979.908 10q23.33
    PCGF6 105062.553 10q24.33
    PDCD11 105156.412 10q24.32
    PFKP 3110.819 10p15.3-p15.2
    PGAM1 99186.027 10q25.3
    PGBD3 50723.151 10q11
    PI4K2A 99400.443 10q24
    PIK3AP1 98353.069 10q24.2
    PIP4K2A 22823.766 10p12.2
    PIPSL 95717.897 10q23.33
    PLAU 75670.862 10q24
    PLCE1 95848.783 10q23
    PLEKHA1 124134.094 10q26.3
    PLXDC2 20105.372 10p12.33
    PNLIP 118305.428 10q25.3
    PNLIPRP3 118187.424 10q26.12
    POLL 103338.639 10q23
    PPA1 71962.586 10q11.1-q24
    PPP1R3C 93388.197 10q23-q24
    PPP2R2D 133747.955 10q26.3
    PPP3CB 75196.186 10q22.2
    PPRC1 103892.751 10q24.32
    PRAP1 135160.844 10q26.3
    PRDX3 120927.215 10q25-q26
    PRF1 72357.104 10q22
    PRKCQ 6469.105 10p15
    PRKG1 52750.911 10q11.2
    PRLHR 120352.916 10q25.3-q26
    PRTFDC1 25137.536 10p12.31
    PSD 104162.374 10q24
    PTPLA 17631.958 10p14-p13
    PTPRE 129705.325 10q26
    RAB18 27793.103 10p12
    RASGEF1A 43689.981 10q11.21
    RASSF4 45455.219 10q11.1
    RBM17 6131.309 10p15.1
    RBM20 112404.155 10q25.3
    RBP4 95351.593 10q23-q24
    RGR 86004.809 10q23
    RGS10 121259.339 10q25
    RNLS 90043.859 10q23.31
    RPS24 79793.518 10q22
    RSU1 16632.617 10p13
    SAMD8 76871.393 10q22.3
    SCD 102106.772 10q23-q24
    SEPHS1 13359.438 10p14
    SFMBT2 7200.586 10p15.1
    SFR1 105881.929 10q25.1
    SFRP5 99526.508 10q24
    SFTPA1 81370.695 10q22.3
    SFTPA2 81315.608 10q22.3
    SFTPD 81697.496 10q22.2-q23.1
    SGMS1 52065.345 10q11.2
    SGPL1 72575.704 10q21
    SH3PXD2A 105353.784 10q25.1
    SHOC2 112723.883 10q25
    SLC18A2 119000.584 10q25
    SLC25A28 101370.275 10q24.2
    SLC29A3 73079.010 10q22.2
    SLIT1 98757.795 10q23.3-q24
    SLK 105727.470 10q25.1
    SMC3 112327.449 10q25
    SORCS1 108333.421 10q23-q25
    SPOCK2 73845.984 10pter-q25.3
    SRGN 70847.828 10q22.1
    STAMBPL1 90639.944 10q23.32
    SUFU 104263.719 10q24.32
    SUPV3L1 70939.993 10q22.1
    SUV39H2 14920.782 10p13
    SVIL 29746.277 10p11.2
    TACR2 71163.958 10q22.1
    TBC1D12 96162.186 10
    TCF7L2 114710.009 10q25.3
    TDRD1 115939.029 10q26.11
    TECTB 114043.414 10q25-q26
    TET1 70320.117 10q21
    TFAM 60144.903 10q21
    TIAL1 121332.978 10q
    TIMM23 51592.081 10q11.21-q11.23
    TLX1 102891.061 10q24.32
    TM9SF3 98277.867 10q24.2
    TNKS2 93558.151 10q23.3
    TRDMT1 17184.982 10p15.1
    TRIM8 104404.252 10q24.3
    TSPAN14 82214.038 10q23.1
    UBE2D1 60094.739 10q21.1
    UCN3 5406.976 10p15.1
    UNC5B 72972.292 10q22.2
    UTF1 135043.778 10q26
    VCL 75757.872 10q22.1-q23
    VENTX 135051.408 10q26.3
    VIM 17270.258 10p13
    VTI1A 114206.756 10q25.2
    VWA2 115999.013 10q25.3
    WAC 28822.421 10p12.1
    WAPAL 88195.013 10q23.31
    WDR11 122610.687 10q26
    WNT8B 102222.812 10q24
    ZEB1 31610.064 10p11.22
    ZMIZ1 80828.792 10q22.3
    ZMYND11 181.424 10p14
    ZNF365 64133.916 10q21.2
    ZRANB1 126630.692 10q26.12
    ZWINT 58117.199 10q21-q22

    GeneCards  

    Contributor(s)

    WrittenJul 2004Philippe Dessen, Sakari Knuutila, Jean-Loup Huret
    UpdatedAug 2014Philippe Dessen, Jean-Loup Huret

    Citation

    This paper should be referenced as such :
    Dessen P, Knuutila S, Huret JL . Chromosome . Atlas Genet Cytogenet Oncol Haematol. Jul 2004 .
    URL : http://AtlasGeneticsOncology.org/Indexbychrom/idxa_10.html
    Dessen P, Huret JL . Chromosome . Atlas Genet Cytogenet Oncol Haematol. Aug 2014 .
    URL : http://AtlasGeneticsOncology.org/Indexbychrom/idxa_10.html
    © Atlas of Genetics and Cytogenetics in Oncology and Haematology
    indexed on : Fri Aug 29 17:50:58 CEST 2014


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