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Chromosome 16

Chromosome 16 : G-banding, diagram and R-banding - Claude Léonard, Jean-Loup Huret
Chromosome 16 diagrams ISCN 2009 - Courtesy Nicole Chia

Leukaemia     

dic(9;16)(p13;q11) PAX5/?
del(16)(q22) CBFB/MYH11
+16 or trisomy 16 (solely)
inv(16)(p13q22) CBFB/MYH11
inv(16)(p13q22) CBFB/MYH11 in treatment related leukemia
inv(16)(p13q24) CBFA2T3/GLIS2
t(1;16)(q11;q11)
t(1;16)(q12;q24)
t(3;16)(q21;q22)
t(3;16)(q27;p13) CIITA/BCL6
t(3;16)(q27;p11) IL21R/BCL6
t(4;16)(q26;p13) IL2/TNFRSF17
t(5;16)(q32;p13) NDE1/PDGFRB
t(5;16)(q33;q22)
t(8;16)(p11;p13) KAT6A/CREBBP
t(8;16)(p11;p13) KAT6A/CREBBP in treatment related leukemia
t(10;16)(q22;p13) KAT6B/CREBBP
t(11;16)(q23;p13.3) KMT2A/CREBBP
t(16;16)(p13;q22) CBFB/MYH11
t(16;21)(p11;q22) FUS/ERG
t(16;21)(q24;q22) RUNX1/CBFA2T3

Solid Tumors     

del(16)(q24q24) USP10/ZDHHC7
t(2;16)(q35;p11) FUS/FEV
t(2;16)(q35;p11) FUS/FEV
t(2;16)(q35;p11) FUS/FEV
t(6;16)(p21;q22) MRPS10/HPR
t(6;16)(p21;q22) RPS10/HPR
t(7;16)(q33;p11) FUS/CREB3L2
t(7;16)(q33;p11) FUS/CREB3L2
t(11;16)(p11;p11) FUS/CREB3L1
t(11;16)(p11;p11) FUS/CREB3L1
t(11;16)(q13;p13) C11orf95/MKL2
t(11;16)(q13;p13) C11orf95/MKL2
t(12;16)(q13;p11) FUS/ATF1
t(12;16)(q13;p11) FUS/DDIT3
t(12;16)(q13;p11) FUS/DDIT3
t(12;16)(q13;p11) FUS/DDIT3
t(12;16)(q13;p11) FUS/ATF1
t(12;16)(q13;p11) FUS/DDIT3
t(12;16)(q24;q24) ZDHHC7/ABCB9
t(16;17)(q22;p13) CDH11/USP6
t(16;17)(q22;p13) CDH11/USP6
t(16;21)(p11;q22) FUS/ERG
t(16;21)(p11;q22) FUS/ERG
t(16;21)(p11;q22) FUS/ERG
t(16;21)(p11;q22) FUS/ERG
t(16;21)(q13;q22) HERPUD1/ERG

Cancer prone diseases     

Brooke-Spiegler syndrome
Hereditary diffuse gastric cancer (HDGC)
Rubinstein-Taybi syndrome (RTS)

All Genes by Location (Kb)

Chromosome 16 by location

Losses / Amplicons     

BONE/SOFT TISSUE



External links     

  • Chromosome 16 - HUGO Chromosomes
  • Chromosome 16 - GoldenPath - Santa Cruz
  • Chromosome 16 - Ensembl Project
  • Chromosome 16 - Map View - NCBI
  • Chromosome 16 - OMIM Gene map
  • Chromosome 16 - Genomic Variants
  • Chromosome 16 - HAPMAP Project
  • Chromosome 16 - Genome Channel - ORNL
  • Chromosome 16 - LaunchPad HGMIS
  • Chromosome 16 - Human Protein Atlas
  • Chromosome 16 - Array BAC clone - Roswell Park Cancer Institute
  • Chromosome 16 - Human BAC Resource (NCBI)
  • Chromosome 16 FISH-mapped BACs (CCAP)
  • Genetic Maps (CHLC)
  • YACs mapped by FISH (Bari)
  • PCP (Partial Chromosome Paints) (Bari)
  • Mouse homology - OMIM - NCBI
  • Chromosome 16 Cancer GeneWeb
  • Human Proteomics Initiative (UniProt)
  • Cytogenetic marker FISH (Abbott)
  • FISH Probes DAKO
  • SureFISH Probes
  • CytoCell
  • Kreatech Diagnostic/

  • Genes

    Annotated genes
    Ordered by Name Ordered by Location
     Kb pter-qter
    ABCC11 48200.822 16q12
    ABCC1 16043.434 16p13.1
    AMFR 56395.364 16q21
    AXIN1 337.440 16p13.3
    BCAR1 75262.928 16q22-q23
    CBFA2T3 88941.263 16q24
    CBFB 67063.050 16q22.1
    CDH1 68771.195 16q22.1
    CDH13 82660.399 16q23.3
    CDH3 68678.151 16q22.1
    CDT1 88870.186 16q24.3
    CIITA 10971.055 16p13
    CLDN6 3064.713 16p13.3
    CLDN9 3062.457 16p13.3
    CREBBP 3775.056 16p13.3
    CTCF 67596.310 16q21-q22.3
    CX3CL1 57406.414 16q13
    CYLD 50775.961 16q12-q13
    DNAJA3 4475.806 16p13.3
    E2F4 67226.068 16q21-q22
    EIF3C 28722.738 16p11.2
    ERCC4 14014.014 16p13.3
    FANCA 89803.959 16q24.3
    FBXO31 87360.593 16q24
    FOXF1 86544.133 16q24
    FUS 31191.431 16p11.2
    GLIS2 4382.225 16p13.3
    IL21R 27438.579 16p11
    MAF 79627.745 16q22-q23
    MAPK3 30128.158 16p11.2
    MMP15 58059.282 16q13
    MMP2 55515.474 16q13-q21
    MVP 29841.836 16p11.2
    MYH11 15796.992 16p13.11
    NOL3 67207.756 16q22.1
    NQO1 69743.304 16q12-q22
    PHLPP2 71678.829 16q22.2
    PKD1 2138.711 16p13.3
    PLK1 23690.201 16p
    PRSS8 31142.754 16p11.2
    RBL2 53468.351 16q12.2
    SFPQ 84226.164 16q24.1
    SIAH1 48394.446 16q12.1
    SOCS1 11348.274 16p13.13
    TERF2 69389.464 16q22.1
    TRAP1 3708.038 16p13.3
    TSC2 2097.990 16p13.3
    USB1 58035.277 16q13
    USP7 8985.951 16p13.3
    WFDC1 84328.312 16q24.1
    WWOX 78133.310 16q23.3-q24.1
    YPEL3 30103.637 16p11
    ZFHX3 72816.786 16q22.3
    Other genes
    possibly implicated
    in cancer
    Ordered by Name Ordered by Location
     Kb pter-qter
    ABCA3 2325.879 16p13.3
    ABCC6 16315.044 16p13.11
    ACD 67691.415 16q22
    ACSF3 89160.217 16q24.3
    ACSM1 20634.559 16p12.3
    ADAMTS18 77316.025 16q23
    ADCY7 50321.823 16q12.1
    ADCY9 4012.650 16p13.3
    AKTIP 53525.192 16q12.2
    ALDOA 30064.411 16p11.2
    ANKRD11 89334.029 16q24.3
    ANKRD26P1 46503.251 16q11.2
    APRT 88875.877 16q24
    AQP8 25228.285 16p12
    ARHGAP17 24930.705 16p12.2-p12.1
    ARHGDIG 330.606 16p13.3
    ARL2BP 57279.038 16q13
    ARL6IP1 18802.991 16p12-p11.2
    ATMIN 81069.458 16q23.2
    ATP2A1 28891.364 16p12.1
    ATP2C2 84402.129 16q24.1
    ATP6V0C 2563.727 16p13.3
    BANP 87985.038 16q24
    BCAR4 11913.692 16p13.13
    BCKDK 31119.615 16p11.2
    BCL7C 30845.362 16p11
    BCO1 81272.296 16q23.2
    BEAN1 66461.200 16q21
    BFAR 14726.668 16p13.2
    BRD7 50352.929 16q12.1
    C16orf45 15596.123 16p13.2
    C16orf62 19566.737 16p12.3
    C16orf74 85741.124 16q24.1
    C1QTNF8 1138.226 16p13.3
    CA7 66878.841 16q22.1
    CACNA1H 1203.241 16p13.3
    CALB2 71392.616 16q22.2
    CASC16 52585.999 16q12.1
    CASC22 52305.528 16q12.1
    CCDC154 1484.389 16p13.3
    CCL17 57438.679 16q13
    CCL22 57392.695 16q13
    CCNF 2479.395 16p13.3
    CCP110 19535.179 16p12.3
    CD19 28943.260 16p11.2
    CDH11 64980.683 16q21
    CDH15 89238.163 16q24.3
    CDH16 66942.025 16q22.1
    CDH5 66400.525 16q22.1
    CDH8 61685.915 16q22.1
    CDIP1 4560.677 16p13.3
    CDIPT 29869.677 16p11.2
    CDK10 89753.076 16q24.3
    CDR2 22357.257 16p13.1-p12
    CENPT 67862.060 16q22.1
    CES1 55836.764 16q22.2
    CES2 66968.347 16q22.1
    CFDP1 75327.608 16q22.2-q22.3
    CHMP1A 89710.839 16q24.3
    CHP2 23765.948 16p12.2
    CHST4 71560.154 16q22.2
    CHTF18 838.622 16p13.3
    CHTF8 69151.912 16q22.1
    CIAPIN1 57462.087 16q21
    CLEC3A 78062.986 16q23
    CLUAP1 3550.945 16p13.3
    CMC2 81009.699 16q23.2
    CMIP 81528.954 16q23
    CMTM2 66613.351 16q22.1-q22.3
    CMTM3 66638.228 16q22.1-q22.3
    CNGB1 57988.580 16q13
    COG8 69362.524 16q22.1
    CORO1A 30194.731 16p11.2
    CORO7 4404.543 16p13.3
    COTL1 84599.204 16q24.1
    COX4I1 85833.173 16q24.1
    COX6A2 31439.052 16p11.12
    CPNE2 57126.455 16q13
    CPNE7 89642.176 16q24.3
    CRNDE 54952.777 16q12.2
    CRYM 21269.839 16p12.2
    CSNK2A2 58191.812 16q21
    CTF1 30907.928 16p11.2
    CYB5B 69458.498 16q22.1
    CYBA 88709.697 16q24
    DBNDD1 90071.273 16q24.3
    DDX19A 70380.824 16q22.1
    DDX19B 70333.062 16q22.3
    DDX28 68055.177 16q22.1-q22.3
    DEXI 11022.748 16p13.13
    DHODH 72042.643 16q22.2
    DHX38 72127.615 16q22
    DNAJA2 46989.274 16q12.1
    DNASE1 3702.940 16p13.3
    DOK4 57505.870 16q21
    DPEP1 89679.716 16q24
    DUS2 68056.847 16q22.1
    DYNLRB2 80574.854 16q23.3
    E4F1 2273.489 16p13.3
    EEF2K 22217.592 16p12
    EME2 1823.229 16p13.3
    EMP2 10622.279 16p13.2
    ERN2 23701.626 16p12.2
    FA2H 74746.856 16q23
    FHOD1 67263.292 16q22
    FOXC2 86600.857 16q24.1
    FOXL1 86612.115 16q24
    FTO 53737.875 16q12.2
    FUK 70488.498 16q22.1
    GABARAPL2 75600.249 16q22.1
    GAS8 90089.008 16q24.3
    GDE1 19513.015 16p12-p11.2
    GFER 2034.150 16p13.3-p13.12
    GINS2 85711.280 16q24.1
    GINS3 58426.298 16q21
    GLG1 74481.326 16q22-q23
    GNAO1 56225.251 16q13
    GNG13 848.041 16p13.3
    GNPTG 1401.900 16p13.3
    GP2 20321.811 16p12.3
    GPR56 57653.910 16q13
    GRIN2A 9847.262 16p13.2
    GSE1 85645.029 16q24.1
    GSPT1 11961.985 16p13.1
    HAGH 1859.104 16p13.3
    HAS3 69139.467 16q22.1
    HBA1 226.679 16p13.3
    HBA2 222.846 16p13.3
    HCCAT5 73126.524 16q22.3
    HEATR3 50099.881 16q12.1
    HERPUD1 56966.002 16q13
    HMOX2 4526.341 16p13.3
    HP 72088.508 16q22.2
    HPR 72097.125 16q22.2
    HS3ST2 22825.860 16p12
    HSD11B2 67465.036 16q22
    HSD17B2 82068.858 16q24.1-q24.2
    HSF4 67197.288 16q21
    HYDIN 71065.314 16q22.2
    IGFALS 1840.414 16p13.3
    IL17C 88705.001 16q24
    IL27 28510.683 16p11
    IL32 3115.313 16p13.3
    IL4R 27325.230 16p12.1-p11.2
    INO80E 30007.531 16p11.2
    IQCK 19727.778 16p12.3
    IRF8 85932.774 16q24.1
    IRX3 54317.212 16q12.2
    IRX5 54965.111 16q12.2
    IST1 71929.396 16q22.2
    ITGAD 31404.633 16p13.1-p11
    ITGAL 30483.983 16p11.2
    ITGAM 31271.288 16p11.2
    ITGAX 31366.455 16p11.2
    JPH3 87636.493 16q24.3
    KARS 75661.622 16q23.1
    KAT8 31128.985 16p11.1
    KDM8 27215.296 16p12.1
    KIAA0430 15688.226 16p13.11
    KIAA0556 27561.468 16p12.1-p11.2
    KIF22 29802.034 16p11.2
    KIFC3 57792.129 16q13-q21
    LAT 28996.387 16p11.2
    LCAT 67973.787 16q22.1
    LCMT1 25123.047 16p12.1
    LDHD 75145.758 16q22.3
    LITAF 11641.578 16p13.3-p12
    LMF1 903.635 16p13.3
    MAP1LC3B 87425.801 16q24.2
    MAPK8IP3 1756.221 16p13.3
    MARVELD3 71660.056 16q22.2
    MAZ 29817.858 16p11.2
    MBTPS1 84087.366 16q24
    MC1R 89984.287 16q24.3
    MEFV 3292.028 16p13.3
    MEIOB 1883.984 16p13.3
    MIR1225 2140.196 16p13.3
    MIR138-2 56892.430 16q13
    MIR140 69966.984 16q22.1
    MIR193B 14397.824 16p13.12
    MIR328 67236.224 16q22.1
    MIR365A 14403.142 16p13.12
    MIR484 15737.151 16p13.11
    MKL2 14165.196 16p13.12
    MLKL 74705.753 16q22.3
    MLST8 2255.178 16p13.3
    MLYCD 83932.730 16q24
    MMP25 3096.682 16p13.3
    MPG 128.169 16p13.3
    MRPL28 417.384 16p13.12
    MSLN 810.766 16p13.3
    MSRB1 1988.234 16p13.3
    MT1A 56672.578 16q13
    MT1E 56659.585 16q13
    MT1F 56691.855 16q13
    MT1G 56700.653 16q13
    MT1H 56703.726 16q13
    MT1M 56666.534 16q13
    MT1X 56716.382 16q13
    MT2A 56642.478 16q13
    MT3 56623.267 16q13
    MTSS1L 70695.107 16q22.1
    MYLK3 46736.194 16q11.2
    NAE1 66836.781 16q22
    NDE1 15737.124 16p13.11
    NDRG4 58497.994 16q21-q22.3
    NFAT5 69599.869 16q22.1
    NFATC3 68119.269 16q22
    NKD1 50582.241 16q12.1
    NME3 1820.321 16q13.3
    NME4 447.192 16p13.3
    NMRAL1 4511.695 16p13.3
    NOB1 69775.757 16q22.1
    NOD2 50733.261 16q12
    NSMCE1 27236.315 16p12.1
    NTAN1 15131.710 16p13
    NTHL1 2089.816 16p13.3
    NUP93 56815.704 16q13
    NUPR1 28548.662 16p11.2
    NUTF2 67880.819 16q22.1
    ORAI3 30960.405 16p11.2
    ORC6 46723.558 16q12
    OSGIN1 83986.827 16q23.3
    PAGR1 29827.528 16p11.2
    PALB2 23614.483 16p12.1
    PAM16 4390.252 16p13.3
    PAPD5 50186.829 16q12.1
    PARD6A 67694.851 16q22.1-q22.3
    PDF 69362.524 16q22.1
    PDIA2 333.118 16p13.3
    PDPK1 2587.965 16p13.3
    PGP 2261.603 16p13.3
    PHKG2 30759.620 16p11.2
    PIEZO1 88781.746 16q24.3
    PIGQ 619.968 16p13.3
    PKMYT1 3022.792 16p13.3
    PLA2G10 14766.405 16p13.1-p12
    PLA2G15 68279.247 16q22.1
    PLCG2 81812.863 16q24.1
    POLR2C 57496.551 16q13-q21
    PPL 4932.508 16p13.3
    PPP4C 30087.384 16p11.2
    PRDM7 90122.974 16q24.3
    PRKCB 23847.300 16p12
    PRM2 11369.493 16p13.13
    PRMT7 68344.877 16q22.1
    PRSS21 2867.164 16p13.3
    PRSS41 2848.486 16p13.3
    PSKH1 67927.175 16q22.1
    PSMB10 67968.407 16q22.1
    PSMD7 74330.673 16q22.3
    PYCARD 31212.807 16p11.2
    PYDC1 31227.283 16p11.2
    RAB11FIP3 524.850 16p13.3
    RAB26 2198.651 16p13.3
    RAB40C 639.357 16p13.3
    RBBP6 24550.908 16p12.2
    RBFOX1 6069.132 16p13.3
    RFWD3 74655.297 16q22.3
    RGS11 318.300 16p13.3
    RHBDF1 108.058 16p13.3
    RNF166 88762.903 16q24.3
    RNF40 30772.933 16p11.2-p11.1
    RPL13 89627.065 16q24.3
    RPS15A 18794.277 16p12.3
    RPS2 2012.062 16p13.3
    RRAD 66955.582 16q22
    RRN3 15153.879 16p13.11
    SBK1 28303.840 16p11.2
    SCNN1B 23313.591 16p12.2-p12.1
    SCNN1G 23194.040 16p12
    SEPT1 30389.454 16p11.2
    SEPT12 4827.615 16p13.3
    SETD1A 30968.615 16p11.2
    SEZ6L2 29882.480 16p12.1
    SF3B3 70557.691 16q22
    SH2B1 28875.078 16p11.2
    SLC12A3 56899.119 16q13
    SLC12A4 67977.377 16q22.1
    SLC5A2 31494.439 16p11.2
    SLC6A2 55690.352 16q12.2
    SLC7A5 87863.629 16q24.3
    SLC7A6 68298.419 16q22.1
    SLC9A3R2 2076.869 16p13.3
    SLX1A 29465.822 16p11.2
    SLX1B 29465.822 16p11.2
    SLX4 3631.184 16p13.3
    SMG1 18816.175 16p12.3
    SMPD3 68392.230 16q22.1
    SNTB2 69221.050 16q22.1
    SOX8 1031.808 16p13.3
    SPG7 89574.796 16q24.3
    SPN 29674.271 16p11.2
    SRCAP 30710.462 16p11.2
    SSTR5 1128.781 16p13.3
    ST3GAL2 70413.338 16q22.3
    STUB1 730.111 16p13.3
    SULT1A1 28616.908 16p12.1
    SULT1A2 28603.264 16p12.1
    TAOK2 29985.188 16p11.2
    TAT 71600.754 16q22.1
    TCEB2 2821.415 16p12.3
    TCF25 89939.994 16q24.3
    TERF2IP 75681.635 16q23.1
    TFAP4 4307.187 16p13
    TGFB1I1 31483.476 16p11
    THAP11 67876.213 16q22.1
    TK2 66541.906 16q22-q23.1
    TNFRSF12A 3070.313 16p13.3
    TNFRSF17 12058.964 16p13.1
    TNRC6A 24741.049 16p11.2
    TOX3 52471.918 16q12.1
    TP53TG3 33205.583 16p13
    TPPP3 67423.710 16q22.1
    TPSAB1 1290.678 16p13.3
    TPSG1 1271.651 16p13.3
    TRADD 67188.089 16q22
    TRAF7 2205.799 16p13.3
    TRIM72 31225.342 16p11.2
    TUBB3 89988.417 16q24.3
    TUFM 28853.732 16p11.2
    TXNDC11 11772.943 16p13.13
    UBE2I 1359.628 16p13.3
    UMOD 20344.373 16p12.3
    UQCRC2 21964.609 16p12
    USP10 84733.555 16q
    USP31 23072.728 16p12.3
    VAC14 70721.342 16q22.1
    VASN 4421.849 16p13.3
    VKORC1 31102.175 16p11.2
    VPS35 46693.589 16q12
    VPS4A 69345.287 16q23.1
    WWP2 69872.640 16q22.1
    ZC3H7A 11844.442 16p13-p12
    ZDHHC7 85008.067 16q23.1
    ZG16 29789.561 16p11.2
    ZG16B 2880.173 16p13.3
    ZNF23 71481.503 16q22.2
    ZNF267 31885.079 16p11.2
    ZNF423 49524.515 16q12
    ZNF668 31072.169 16p11.2
    ZNF689 30613.879 16p11.2

    GeneCards  

    Contributor(s)

    WrittenJul 2004Philippe Dessen, Sakari Knuutila, Jean-Loup Huret
    UpdatedAug 2014Philippe Dessen, Jean-Loup Huret

    Citation

    This paper should be referenced as such :
    Dessen P, Knuutila S, Huret JL . Chromosome . Atlas Genet Cytogenet Oncol Haematol. Jul 2004 .
    URL : http://AtlasGeneticsOncology.org/Indexbychrom/idxa_16.html
    Dessen P, Huret JL . Chromosome . Atlas Genet Cytogenet Oncol Haematol. Aug 2014 .
    URL : http://AtlasGeneticsOncology.org/Indexbychrom/idxa_16.html
    © Atlas of Genetics and Cytogenetics in Oncology and Haematology
    indexed on : Fri Aug 29 17:51:00 CEST 2014


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