Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case reports   Journals   Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

Chromosome 18

Chromosome 18 : G-banding, diagram and R-banding - Claude Léonard, Jean-Loup Huret
Chromosome 18 diagrams ISCN 2009 - Courtesy Nicole Chia

Leukaemia     

dic(9;18)(p13;q11) PAX5/ZNF521
der(9;18)(p10;q10)
+18 or trisomy 18 in lymphoproliferative disorders
inv(18)(p11q21)
t(1;18)(q10;q10)
t(1;18)(q25;q23)
t(2;18)(p11;q21) IGK/BCL2
t(2;18)(q11;q21) AFF3/BCL2
t(3;18)(q26;q11) ?/MECOM
t(11;18)(p15;q12) NUP98/SETBP1
t(11;18)(q21;q21) BIRC3/MALT1
t(12;18)(p13;q12) ETV6/SETBP1
t(14;18)(q32;q21)
t(14;18)(q32;q21) IGH/MALT1
t(18;21)(q21;q22) RUNX1/?
t(18;22)(q21;q11)

Solid Tumors     

t(8;18)(q24;q12) PVT1/NOL4
t(X;18)(p11;q11) SS18/SSX
t(X;18)(p11;q11) SS18/SSX1
t(X;18)(p11;q11) SS18/SSX2
t(X;18)(p11;q11) SS18/?
t(X;18)(p11;q11) SS18/
t(18;18)(p11;q12) TWSG1/PIK3C3
t(18;18)(q11;q11) LAMA3/RIOK3
t(18;20)(p11;q13) PHACTR3/PTPRM

Cancer prone diseases     

All Genes by Location (Kb)

Chromosome 18 by location

Losses / Amplicons     

BONE/SOFT TISSUE



External links     

  • Chromosome 18 - HUGO Chromosomes
  • Chromosome 18 - GoldenPath - Santa Cruz
  • Chromosome 18 - Ensembl Project
  • Chromosome 18 - Map View - NCBI
  • Chromosome 18 - OMIM Gene map
  • Chromosome 18 - Genomic Variants
  • Chromosome 18 - HAPMAP Project
  • Chromosome 18 - Genome Channel - ORNL
  • Chromosome 18 - LaunchPad HGMIS
  • Chromosome 18 - Human Protein Atlas
  • Chromosome 18 - Array BAC clone - Roswell Park Cancer Institute
  • Chromosome 18 - Human BAC Resource (NCBI)
  • Chromosome 18 FISH-mapped BACs (CCAP)
  • Genetic Maps (CHLC)
  • YACs mapped by FISH (Bari)
  • PCP (Partial Chromosome Paints) (Bari)
  • Mouse homology - OMIM - NCBI
  • Chromosome 18 Cancer GeneWeb
  • Human Proteomics Initiative (UniProt)
  • Cytogenetic marker FISH (Abbott)
  • FISH Probes DAKO
  • SureFISH Probes
  • CytoCell
  • Kreatech Diagnostic/

  • Genes

    Annotated genes
    Ordered by Name Ordered by Location
     Kb pter-qter
    ADCYAP1 904.944 18p11
    AQP4 24432.008 18q11.2-q12.1
    BCL2 60790.579 18q21.3
    DCC 49866.542 18q21.1
    DSG2 29078.027 18q12.1
    EPB41L3 5392.380 18p11.32
    GATA6 19749.398 18q11-q12
    MALT1 56338.618 18q21
    MAPK4 48086.484 18q21.1
    MBD2 51677.971 18q21
    MIR122 56118.306 18q21.31
    PHLPP1 60382.672 18q21.32
    RBBP8 20513.295 18q11.2
    SERPINB3 61322.431 18q21.3
    SERPINB5 61144.144 18q21.33
    SETBP1 42260.138 18q21.1
    SLC39A6 33690.963 18q12.2
    SMAD2 45359.466 18q21
    SMAD4 48556.583 18q21.1
    SOCS6 67956.137 18q22
    SS18 23596.217 18q11.2
    Other genes
    possibly implicated
    in cancer
    Ordered by Name Ordered by Location
     Kb pter-qter
    ABHD3 19230.858 18q11.1
    ACAA2 47309.874 18q21
    ADNP2 77866.915 18q23
    AFG3L2 12328.943 18p11.21
    ALPK2 56148.482 18q21.31
    ANKRD12 9136.751 18p11.22
    ANKRD20A5P 14179.096 18p11.21
    ANKRD29 21179.978 18q11.2
    ANKRD30B 14748.239 18p11.21
    ANKRD62 12093.848 18p11.21
    APCDD1 10454.625 18p11.21
    AQP4-AS1 24445.272 18q12.1
    ARHGAP28 6834.432 18p11.23
    ASXL3 31158.541 18q11
    ATP5A1 43664.110 18q21
    ATP8B1 55313.659 18q21
    ATP9B 76829.397 18q23
    B4GALT6 29202.209 18q11
    BOD1L2 54814.293 18q21.31
    C18orf12 45778.672 18q21.1
    C18orf15 13239.542 18p11.21
    C18orf21 33552.588 18q12.2
    C18orf25 43753.988 18q21.1
    C18orf32 47007.548 18q21.1
    C18orf42 5143.672 18p11.31
    C18orf49 60251.816 18q21.33
    C18orf54 51884.287 18q21
    C18orf61 12200.778 18p11.22
    C18orf63 71983.110 18q22.3
    C18orf65 74207.477 18q23
    C18orf8 21083.434 18q11.2
    CABLES1 20715.727 18q11.2
    CABYR 21718.920 18q11.2
    CBLN2 70203.915 18q22.3
    CBX3P2 2652.169 18p11.32
    CCBE1 57098.171 18q21.32
    CCDC102B 66382.491 18q22.1
    CCDC178 30517.366 18q12.1
    CCDC68 52568.740 18q21
    CD226 67530.193 18q22.3
    CDH19 64168.424 18q22.1
    CDH20 59157.775 18q21.33
    CDH2 25530.930 18q12.1
    CDH7 63418.157 18q22.1
    CELF4 34823.008 18q12
    CEP192 12991.361 18p11.21
    CEP76 12672.626 18p11.21
    CETN1 580.369 18p11.32
    CFAP53 47753.563 18q21.1
    CHMP1B 11851.389 18p11.21
    CHST9 24495.595 18q11.2
    CIDEA 12254.318 18p11.21
    CLUL1 596.998 18p11.32
    CNDP1 72201.692 18q22.3
    CNDP2 72166.823 18q22.3
    COLEC12 319.355 18pter-p11.3
    CPLX4 56962.636 18q21.32
    CTAGE1 19993.564 18q11.2
    CTDP1 77441.430 18q23
    CTIF 46065.427 18q21.1
    CXADRP3 14477.954 18p11.21
    CXXC1 47808.713 18q12
    CYB5A 71920.527 18q23
    CYP4F35P 14337.422 18p11.21
    DLGAP1 3496.030 18p11.3
    DLGAP1-AS2 3604.968 18p11.31
    DLGAP1-AS3 3878.180 18p11.31
    DLGAP1-AS4 3962.353 18p11.31
    DLGAP1-AS5 4264.602 18p11.31
    DOK6 67068.284 18q22.2
    DSC1 28709.214 18q12.1
    DSC2 28645.942 18q12.1
    DSC3 28569.331 18q12.1
    DSCAS 28681.551 18q12.1
    DSEL 65173.819 18q22.1
    DSG1 28898.052 18q12.1
    DSG1-AS1 28923.331 18q12.1
    DSG2-AS1 29122.109 -
    DSG3 29027.732 18q12.1
    DSG4 28956.740 18q12.1
    DTNA 32173.282 18q12
    DYM 46570.172 18q21.1
    DYNAP 52258.390 18q21.2
    ELAC1 48494.387 18q21
    ELP2 33709.837 18q12.1
    EMILIN2 2847.028 18p11.3
    ENOSF1 670.324 18p11.32
    EPG5 43427.574 18q12.3
    ESCO1 19109.262 18q11.2
    FAM210A 13663.346 18p11.21
    FAM69C 72102.963 18q22.3
    FBXO15 71740.588 18q22.3
    FECH 55212.073 18q21.2-q21.3
    FHOD3 33877.659 18q12
    FLJ25715 77398.928 18q23
    FLJ34223 10243.285 18p11.22
    FLJ45743 53670.844 18q21.2
    GACAT2 8695.854 18p11.22
    GALNT1 33234.533 18q12.1
    GALR1 74962.008 18q23
    GAREM 29843.484 18q12.1
    GATA6-AS1 19746.859 18q11.2
    GNAL 11751.471 18p11.22-p11.21
    GREB1L 18822.203 18q11.2
    GRP 56887.400 18q21.1-q21.32
    GTSCR1 68297.755 18q22
    HAUS1 43684.298 18q21.1
    HDHD2 44633.781 18q21.1
    HMSD 61616.588 18q21.33
    HRH4 22040.593 18q11.2
    HSBP1L1 77724.582 18q23
    IER3IP1 44681.390 18q12
    IMPA2 11981.427 18p11.2
    IMPACT 22006.609 18q11.2-q12.1
    INO80C 33048.291 18q12.2
    KATNAL2 44526.787 18q21.1
    KC6 39060.236 -
    KCNG2 77623.668 18q23
    KCTD1 24034.874 18
    KDSR 60994.971 18q21
    KIAA1328 34409.080 18q12.2
    KIAA1468 59854.524 18q21.33
    KLHL14 30252.634 18q12.1
    L3MBTL4 5954.705 18p11.31-p11.23
    L3MBTL4-AS1 6256.743 18p11.31
    LAMA1 6941.743 18p11.3
    LAMA3 21452.984 18q11.2
    LDLRAD4 13611.463 18p11.21
    LDLRAD4-AS1 13419.498 18p11.21
    LINC00305 61747.536 18q22.1
    LINC00470 1269.824 18p11.32
    LINC00526 5237.129 18p11.31
    LINC00667 5238.099 18p11.31
    LINC00668 6925.477 18p11.31
    LINC00669 36786.888 18q12.2-q12.3
    LINC00683 74331.734 18q23
    LINC00907 39766.633 18q12.3
    LINC00908 74240.612 18q23
    LINC00909 72260.162 18q22.3
    LINC01029 75683.253 18q23
    LINC01254 10405.130 18p11.22
    LINC01255 11490.047 18p11.21
    LINC01415 53443.958 18q21.2
    LINC01443 14946.266 18p11.21
    LINC01444 14969.606 18p11.21
    LINC01477 37646.250 18q12.3
    LINC01478 41903.400 18q12.3
    LINC01538 61880.318 18q22.1
    LINC01539 53750.587 18q21.2
    LINC01540 3466.248 -
    LINC01541 69187.200 -
    LINC01543 24002.959 18p11.21
    LINC01544 59415.409 -
    LINC-ROR 54721.804 18q21.31
    LIPG 47088.427 18q21.1
    LMAN1 56995.056 18q21.3-q22
    LOC100127909 45659.988 18q21.1
    LOC100127994 77256.058 18q23
    LOC100128219 7943.241 18p11.23
    LOC100129089 74714.805 18q23
    LOC100129408 55324.560 18q21.31
    LOC100130453 77514.711 18q23
    LOC100130468 10476.540 18p11.22
    LOC100131655 74506.688 -
    LOC100192426 8360.818 18p11.23
    LOC100286986 5629.868 18p11.31
    LOC100287225 48918.412 18q21.2
    LOC100289533 21977.240 18q11.2
    LOC100505549 55297.534 -
    LOC100505817 70992.176 -
    LOC100996324 12739.485 18p11.21
    LOC100996333 12073.231 -
    LOC101060542 68047.376 18q22.2
    LOC101927188 6954.676 -
    LOC101927229 52773.135 -
    LOC101927273 53548.919 -
    LOC101927322 56337.241 -
    LOC101927410 10661.930 18p11.22
    LOC101927571 20303.454 18q11.2
    LOC101927651 74334.738 18q23
    LOC101928167 51105.993 18q21.2
    LOC102723376 12.075 10p15
    LOC102724651 51094.817 18q21.2
    LOC284219 8765.374 18p11.22
    LOC284240 77338.063 18q23
    LOC284242 29522.538 18q12.1
    LOC284244 31329.600 18q12.1
    LOC284263 43063.310 18q21.1
    LOC284294 61771.325 18q22.1
    LOC339298 73834.953 18q23
    LOC388456 926.084 18p11.32
    LOC400655 70821.293 18q22.3
    LOC400661 74401.986 18q23
    LOC400662 75897.217 18q23
    LOC643542 65183.783 18q22.1
    LOC644669 15313.555 18p11.21
    LOC646778 29265.618 18q12.1
    LOC647983 14990.706 18p11.21
    LOC727896 2943.213 18p11.31
    LOC729950 22208.146 18q11.2
    LOC732210 14856.968 18p11.21
    LOXHD1 44056.935 18q21.1
    LPIN2 2916.992 18p
    LRRC30 7231.137 18p11.23
    MAPRE2 32556.892 18q12.1
    MBD1 47795.216 18q21
    MBP 74690.789 18q23
    MC2R 13882.043 18p11.2
    MC4R 58038.564 18q22
    MC5R 13825.543 18p11.2
    ME2 48405.432 18q21
    MEP1B 29769.987 18q12.2-q12.3
    METTL4 2537.524 18p11.31
    MEX3C 48700.920 18q21.1
    MIB1 19321.290 18q11.2
    MIR1-2 19408.965 18q11.2
    MIR133A1 19405.659 18q11.2
    MIR133A1HG 19405.440 18q11.2
    MIR1539 47013.743 18
    MIR187 33484.781 18q12.2
    MIR302F 27878.876 18q12.1
    MIR3156-2 14830.165 18
    MIR320C1 19263.471 18q11.2
    MIR320C2 21901.650 18q11.2
    MIR3591 56118.312 18
    MIR3975 33171.701 18
    MIR3976 5840.694 18
    MIR3976HG 5748.818 18p11.31
    MIR4317 6374.360 18
    MIR4318 35237.098 18
    MIR4319 42550.047 18
    MIR4320 47652.869 18
    MIR4526 13611.113 18
    MIR4529 53146.452 18
    MIR4741 20513.312 18
    MIR4743 46196.971 18
    MIR4744 46576.057 18
    MIR5011 64748.821 18
    MIR5190 13459.946 18
    MIR5583-1 37256.685 18
    MIR5583-2 37256.683 18
    MIR6718 3885.353 -
    MIR7153 11654.884 -
    MIR8057 24171.431 -
    MIR8078 112.256 -
    MOCOS 33767.480 18q12
    MPPE1 11883.472 18p11.21
    MRO 48321.490 18q21
    MTCL1 8717.369 18p11.22
    MYL12A 3247.528 18p11.31
    MYL12B 3262.611 18p11.31
    MYO5B 47349.156 18q
    MYOM1 3066.805 18p11.31
    NAPG 10525.873 18p11.21
    NARS 55267.894 18q21.31
    NDC80 2571.510 18p11.31
    NDUFV2 9102.628 18p11.22
    NDUFV2-AS1 9121.263 18p11.22
    NEDD4L 55714.458 18q21
    NETO1 70409.549 18q22.2
    NFATC1 77155.772 18q23
    NOL4 31431.064 18q12
    NPC1 21111.463 18q11.2
    OACYLP 56702.971 18q21.32
    ONECUT2 55102.917 18q21.31
    ORF1 77275.798 18q23
    OSBPL1A 21742.011 18q11.2
    PARD6G 77915.117 18q23
    PARD6G-AS1 77905.932 18q23
    PCAT18 24267.585 18q11.2
    PIAS2 44390.023 18q12.1-q12.3
    PIEZO2 10670.244 18p11.21
    PIGN 59711.458 18q21.33
    PIK3C3 39535.199 18q12.3
    PMAIP1 57567.192 18q21.32
    POLI 51795.849 18q21.1
    POTEC 14511.737 18p11.21
    PPP4R1 9546.789 18p11.22
    PPP4R1-AS1 9614.805 18p11.22
    PQLC1 77662.420 18q23
    PSMA8 23713.816 18q11.2
    PSMG2 12702.987 18p11.21
    PSTPIP2 43563.502 18q12
    PTPN2 12785.477 18p11.3-p11.2
    PTPRM 7567.314 18p11.2
    RAB12 8609.443 18p11.22
    RAB27B 52495.708 18q21.2
    RAB31 9708.228 18p11.3
    RALBP1 9475.530 18p11.22
    RAX 56934.267 18q21.31
    RBFA 77794.346 18q23
    RBFADN 77827.256 18q23
    RIOK3 21032.787 18q11.2
    RIT2 40323.183 18q12.3
    RNF125 29598.445 18q12.1
    RNF138 29672.569 18q12.1
    RNF152 59482.304 18q21.33
    RNF165 43914.187 18q21.1
    RNMT 13726.704 18p11.21
    RNU5B-1 22458.092 15q22
    ROCK1 18529.703 18q11.2
    ROCK1P1 109.065 18p11.32
    RPL17 47014.851 18q21
    RPL17-C18orf32 47007.548 18q21.1
    RPRD1A 33569.792 18q12.2
    RTTN 67671.043 18q22.1
    SALL3 76740.275 18q23
    SCARNA17 47340.393 18q21.1
    SEC11C 56807.125 18q21.32
    SEH1L 12947.983 18p11.21
    SERPINB10 61582.745 18q21.3
    SERPINB11 61370.193 18q21.33
    SERPINB12 61223.393 18q21.33
    SERPINB13 61254.534 18q21.33
    SERPINB2 61554.939 18q21.3
    SERPINB4 61304.493 18q21.33
    SERPINB7 61420.281 18q21.33
    SERPINB8 61637.263 18q22.1
    SIGLEC15 43405.545 18q21.1
    SKA1 47901.392 18q21.1
    SKOR2 44757.494 18q21.1
    SLC14A1 43304.092 18q11-q12
    SLC14A2 42792.947 18q12.1-q21.1
    SLC14A2-AS1 43018.149 18q12.3
    SLC25A52 29339.659 18q12.1
    SLC35G4 11609.557 18p11.21
    SLMO1 12407.895 18p11.21
    SMAD7 46446.223 18q21.1
    SMCHD1 2655.886 18p11.32
    SMIM21 73121.827 18q23
    SNHG22 47340.393 18q21.1
    SNORA37 51748.654 18q21.2
    SNORD58A 47017.653 18q21.1
    SNORD58B 47018.034 18q21.1
    SNORD58C 47015.605 18q21.1
    SNRPD1 19192.230 18q11.2
    SPIRE1 12446.511 18p11.21
    ST8SIA3 55019.721 18q21.31
    ST8SIA5 44259.081 18q12.3
    STARD6 51851.062 18q21.2
    SYT4 40847.857 18q12.3
    TAF4B 23806.847 18q11.1
    TCEB3B 44558.943 18q21.1
    TCEB3C 44548.658 18q21.1
    TCEB3CL 44542.731 18q21.1
    TCEB3CL2 44542.731 18q21.1
    TCF4 52889.562 18q21.1
    TGIF1 3449.411 18p11.31
    THOC1 214.520 18p11.32
    TIMM21 71815.746 18q22.3
    TMEM200C 5890.184 18p11.31
    TMEM241 20875.979 18q11.2
    TMX3 66340.925 18q22
    TNFRSF11A 59992.520 18q22.1
    TPGS2 34374.069 18q12.2
    TRAPPC8 29409.136 18q12.1
    TSHZ1 72922.710 18q22.3
    TTC39C 21594.384 18q11.2
    TTC39C-AS1 21574.179 18q11.2
    TTR 29171.730 18q12.1
    TUBB6 12308.257 18p11.21
    TWSG1 9334.765 18p11.3
    TXNDC2 9885.723 -
    TXNL1 54270.053 18q21.31
    TXNL4A 77732.867 18q23
    TYMS 657.604 18p11.31-p11.21
    TYMSOS 649.620 18p11.32
    USP14 158.483 18p11.32
    VAPA 9913.955 18p11.2
    VPS4B 61056.425 18q21.33
    WBP11P1 30091.626 18q12.1
    WDR7 54318.616 18q21.31
    YES1 721.592 18p11.31-p11.21
    ZADH2 72909.278 18q22.3
    ZBTB14 5289.018 18pter-p11.21
    ZBTB7C 45553.639 18q21.1
    ZCCHC2 60190.658 18q21.33
    ZNF236 74536.116 18q22-q23
    ZNF24 32912.178 18q12
    ZNF271 32870.300 18q12.2
    ZNF271P 32870.300 18q12.2
    ZNF396 32946.661 18p12
    ZNF397 32820.994 18p12
    ZNF407 72342.919 18q23
    ZNF516 74069.637 18q23
    ZNF519 14099.942 18p11.21
    ZNF521 22641.888 18q11.2
    ZNF532 56530.061 18q21.32
    ZSCAN30 32831.022 18q12.2

    Contributor(s)

    WrittenJul 2004Philippe Dessen, Sakari Knuutila, Jean-Loup Huret
    UpdatedDec 2014Philippe Dessen, Jean-Loup Huret

    Citation

    This paper should be referenced as such :
    Dessen P, Knuutila S, Huret JL . Chromosome . Atlas Genet Cytogenet Oncol Haematol. Jul 2004 .
    URL : http://AtlasGeneticsOncology.org/Indexbychrom/idxa_18.html
    Dessen P, Huret JL . Chromosome . Atlas Genet Cytogenet Oncol Haematol. Dec 2014 .
    URL : http://AtlasGeneticsOncology.org/Indexbychrom/idxa_18.html
    © Atlas of Genetics and Cytogenetics in Oncology and Haematology
    indexed on : Sun Dec 21 03:39:01 CET 2014


    Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case reports   Journals   Portal   Teaching   

    X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA