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Chromosome 18

Chromosome 18 : G-banding, diagram and R-banding - Claude Léonard, Jean-Loup Huret
Chromosome 18 diagrams ISCN 2009 - Courtesy Nicole Chia

Leukaemia     

t(1;18)(q25;q23)
t(1;18)(q10;q10)
t(2;18)(q11;q21)
t(2;18)(p11;q21)
t(3;18)(q26;q11)
der(9;18)(p10;q10)
t(11;18)(q21;q21)
t(14;18)(q32;q21) (IgH/BCL2)
t(14;18)(q32;q21)(IgH/MALT1)
inv(18)(p11q21)
+18 or trisomy 18 in lymphoproliferative disorders
t(18;21)(q21;q22)
t(18;22)(q21;q11)

Solid Tumors     

t(X;18)(p11.2;q11.2)
(X;18)(p11;q11)

Cancer prone diseases     

All Genes by Location (Kb)
Chromosome 18 by location

Losses / Amplicons     

BONE/SOFT TISSUE

External links     

  • Chromosome 18 - HUGO Chromosomes
  • Chromosome 18 - GoldenPath - Santa Cruz
  • Chromosome 18 - Ensembl Project
  • Chromosome 18 - Map View - NCBI
  • Chromosome 18 - OMIM Gene map
  • Chromosome 18 - Genomic Variants
  • Chromosome 18 - HAPMAP Project
  • Chromosome 18 - Genome Channel - ORNL
  • Chromosome 18 - LaunchPad HGMIS
  • Chromosome 18 - Human Protein Atlas
  • Chromosome 18 - Array BAC clone - Roswell Park Cancer Institute
  • Chromosome 18 - Human BAC Resource (NCBI)
  • Chromosome 18 FISH-mapped BACs (CCAP)
  • Genetic Maps (CHLC)
  • YACs mapped by FISH (Bari)
  • PCP (Partial Chromosome Paints) (Bari)
  • Mouse homology - OMIM - NCBI
  • Chromosome 18 Cancer GeneWeb
  • Chromosome 18 GeneCards (Weizmann)
  • Human Proteomics Initiative (Expasy)

    • Genes

    Annotated genes
    Ordered by Name Ordered by Location
     Kb pter-qter
    BCL2 60795.858 18q21.33|18q21.3
    DCC 50278.536 18q21.3
    DSG2 29078.209 18q12.1
    EPB41L3 5392.387 18p11.32
    GATA6 19750.893 18q11.1-q11.2
    MALT1 56338.810 18q21
    MBD2 51681.210 18q21
    PHLPP1 60383.958 18q21.33
    RBBP8 20513.848 18q11.2
    SERPINB5 61144.194 18q21.3
    SMAD4 48556.610 18q21.1
    Other genes
    possibly implicated
    in cancer
    Ordered by Name Ordered by Location
     Kb pter-qter
    ADCYAP1 904.413 18p11
    ANKRD30B 14748.238 18p11.21
    APCDD1 10454.624 18p11.22
    AQP4 24436.175 18q11.2-q12.1
    C18orf8 21084.336 18q11.2
    CABLES1 20716.326 18q11.2
    CCBE1 57101.148 18q21.32
    CCDC68 52568.793 18q21
    CD226 67531.465 18q22.3
    CDH20 59157.774 18q21.33
    CDH7 63418.156 18q22.1
    CETN1 580.379 18p11.32
    CNDP1 72201.861 18q22.3
    CTAGE1 19993.566 18p11.2
    DSC1 28710.478 18q12.2|18q12.1
    DSC2 28647.892 18q12.1
    DSC3 28571.030 18q12.1
    DSG1 28935.855 18q12.1
    ELAC1 48494.446 18q21
    EMILIN2 2906.956 18p11.3
    ESCO1 19109.261 18q11.2
    FHOD3 34174.748 18q12
    GALNT1 33272.160 18q12.1
    GALR1 74962.504 18q23
    GNAL 11752.432 18p11.22-p11.21
    GRP 56887.497 18q21.1-q21.32
    HRH4 22040.638 18q11.2
    IER3IP1 44681.412 18q12
    IMPA2 11981.426 18p11.2
    INO80C 33032.193 18q12.2
    KDSR 60994.971 18q21.3
    LAMA1 6953.728 18p11.3
    MAPRE2 32621.396 18q12.1
    MBD1 47793.255 18q21
    MBP 74726.217 18q23
    MC2R 13884.140 18p11.2
    MC4R 58038.584 18q22
    ME2 48452.214 6p25-p24|18q21
    MEP1B 29769.986 18q12.2-q12.3
    METTL4 2537.529 18p11.32
    MEX3C 48700.921 18q21.2
    MIB1 19418.325 18q11.2
    MYL12A 3247.851 18p11.31
    MYOM1 3129.228 18p11.31
    NDC80 2571.604 18p11.32
    NEDD4L 55862.721 18q21
    ONECUT2 55152.286 18q21.31
    PIGN 59711.781 18q21.33
    PIK3C3 39617.713 18q12.3
    PMAIP1 57567.227 18q21.32
    POLI 51795.924 18q21.1
    PPP4R1 9546.791 18p11.22
    PSMG2 12658.737 18p11.21
    PSTPIP2 43563.502 18q12
    PTPN2 12792.300 18p11.3-p11.2
    RAB12 8624.934 18p11.22
    RAB27B 52495.707 18q21.2
    RAB31 9708.302 18p11.3
    RALBP1 9517.176 18p11.3
    RIOK3 21033.324 18q11.2
    RIT2 40323.458 18q12.3
    RNF125 29598.444 18q12.1
    RNF138 29672.054 18q12.1
    RNF152 59480.602 18q21.33
    ROCK1 18547.821 18q11.1
    SALL3 76740.274 18q23
    SERPINB13 61255.882 18q21.3-q22
    SERPINB3 61322.431 18q21.3
    SERPINB4 61304.952 18q21.3
    SERPINB8 61637.314 18q21.3
    SETBP1 42260.862 18q21.1
    SKOR2 44757.494 18q21.1
    SLC14A1 43304.171 18q11-q12
    SLC39A6 33689.112 18q12.2
    SMAD7 46446.223 18q21.1
    SOCS6 67991.904 18q22.2
    TAF4B 23806.449 18q11.2
    TCF4 52895.079 18q21.1
    TGIF1 3450.481 18p11.3
    TNFRSF11A 59992.519 18q22.1
    TSHZ1 72994.818 18q22.3
    TTR 29171.860 18q12.1
    TXNL4A 77733.406 18q23
    TYMS 657.633 18p11.32
    USP14 158.560 18p11.32
    YES1 724.425 18p11.31-p11.21
    ZNF24 32916.905 18q12
    ZNF271 32870.299 18q12
    ZNF521 22641.887 18q11.2

    GeneCards  

    Contributor(s)

    WrittenJul 2004Philippe Dessen, Sakari Knuutila, Jean-Loup Huret
    Updated Jean-Loup Huret, Philippe Dessen

    Citation

    This paper should be referenced as such :
    Dessen P, Knuutila S, Huret JL . Chromosome . Atlas Genet Cytogenet Oncol Haematol. Jul 2004 .
    URL : http://AtlasGeneticsOncology.org/Indexbychrom/idxa_18.html
    Dessen P, Huret JL . Chromosome . Atlas Genet Cytogenet Oncol Haematol. .
    URL : http://AtlasGeneticsOncology.org/Indexbychrom/idxa_18.html
    © Atlas of Genetics and Cytogenetics in Oncology and Haematology
    indexed on : Wed Sep 1 08:32:01 CEST 2010
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