Atlas of Genetics and Cytogenetics in Oncology and Haematology


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Chromosome 18

Chromosome 18 : G-banding, diagram and R-banding - Claude Léonard, Jean-Loup Huret
Chromosome 18 diagrams ISCN 2009 - Courtesy Nicole Chia

Leukaemia     

dic(9;18)(p13;q11) PAX5/ZNF521
der(9;18)(p10;q10)
+18 or trisomy 18 in lymphoproliferative disorders
inv(18)(p11q21)
t(1;18)(q10;q10)
t(1;18)(q25;q23)
t(2;18)(p11;q21) IGK/BCL2
t(2;18)(q11;q21) AFF3/BCL2
t(3;18)(q26;q11) ?/MECOM
t(11;18)(p15;q12) NUP98/SETBP1
t(11;18)(q21;q21) BIRC3/MALT1
t(12;18)(p13;q12) ETV6/SETBP1
t(14;18)(q32;q21)
t(14;18)(q32;q21) IGH/MALT1
t(18;21)(q21;q22) RUNX1/?
t(18;22)(q21;q11)

Solid Tumors     

t(X;18)(p11;q11) SS18/SSX
t(X;18)(p11;q11) SS18/SSX1
t(X;18)(p11;q11) SS18/SSX2
t(X;18)(p11;q11) SS18/?
t(X;18)(p11;q11) SS18/

Cancer prone diseases     

All Genes by Location (Kb)

Chromosome 18 by location

Losses / Amplicons     

BONE/SOFT TISSUE



External links     

  • Chromosome 18 - HUGO Chromosomes
  • Chromosome 18 - GoldenPath - Santa Cruz
  • Chromosome 18 - Ensembl Project
  • Chromosome 18 - Map View - NCBI
  • Chromosome 18 - OMIM Gene map
  • Chromosome 18 - Genomic Variants
  • Chromosome 18 - HAPMAP Project
  • Chromosome 18 - Genome Channel - ORNL
  • Chromosome 18 - LaunchPad HGMIS
  • Chromosome 18 - Human Protein Atlas
  • Chromosome 18 - Array BAC clone - Roswell Park Cancer Institute
  • Chromosome 18 - Human BAC Resource (NCBI)
  • Chromosome 18 FISH-mapped BACs (CCAP)
  • Genetic Maps (CHLC)
  • YACs mapped by FISH (Bari)
  • PCP (Partial Chromosome Paints) (Bari)
  • Mouse homology - OMIM - NCBI
  • Chromosome 18 Cancer GeneWeb
  • Human Proteomics Initiative (UniProt)
  • Cytogenetic marker FISH (Abbott)
  • FISH Probes DAKO
  • SureFISH Probes
  • CytoCell
  • Kreatech Diagnostic/

  • Genes

    Annotated genes
    Ordered by Name Ordered by Location
     Kb pter-qter
    AQP4 24432.008 18q11.2-q12.1
    BCL2 60790.579 18q21.3
    DCC 49866.542 18q21.1
    DSG2 29078.027 18q12.1
    EPB41L3 5392.380 18p11.32
    GATA6 19749.398 18q11-q12
    MALT1 56338.618 18q21
    MAPK4 48086.484 18q21.1
    MBD2 51677.971 18q21
    MIR122 56118.306 18q21.31
    PHLPP1 60382.672 18q21.32
    RBBP8 20513.295 18q11.2
    SERPINB3 61322.431 18q21.3
    SERPINB5 61144.144 18q21.33
    SETBP1 42260.138 18q21.1
    SLC39A6 33690.963 18q12.2
    SMAD2 45359.466 18q21
    SMAD4 48556.583 18q21.1
    SOCS6 67956.137 18q22
    SS18 23596.217 18q11.2
    Other genes
    possibly implicated
    in cancer
    Ordered by Name Ordered by Location
     Kb pter-qter
    ADCYAP1 904.944 18p11
    ALPK2 56148.482 18q21.31
    ANKRD30B 14748.239 18p11.21
    APCDD1 10454.625 18p11.21
    ATP8B1 55313.659 18q21
    ATP9B 76829.397 18q23
    C18orf8 21083.434 18q11.2
    CABLES1 20715.727 18q11.2
    CABYR 21718.920 18q11.2
    CCBE1 57098.171 18q21.32
    CCDC68 52568.740 18q21
    CD226 67530.193 18q22.3
    CDH19 64168.424 18q22.1
    CDH20 59157.775 18q21.33
    CDH2 25530.930 18q12.1
    CDH7 63418.157 18q22.1
    CEP76 12672.626 18p11.21
    CETN1 580.369 18p11.32
    CIDEA 12254.318 18p11.21
    CNDP1 72201.692 18q22.3
    CNDP2 72166.823 18q22.3
    CTAGE1 19993.564 18q11.2
    CYB5A 71920.527 18q23
    DSC1 28709.214 18q12.1
    DSC2 28645.942 18q12.1
    DSC3 28569.331 18q12.1
    DSG1 28898.052 18q12.1
    DSG3 29027.732 18q12.1
    DYNAP 52258.390 18q21.2
    ELAC1 48494.387 18q21
    EMILIN2 2847.028 18p11.3
    ENOSF1 670.324 18p11.32
    ESCO1 19109.262 18q11.2
    FHOD3 33877.659 18q12
    GACAT2 8695.854 18p11.22
    GALNT1 33234.533 18q12.1
    GALR1 74962.008 18q23
    GNAL 11751.471 18p11.22-p11.21
    GREB1L 18822.203 18q11.2
    GRP 56887.400 18q21.1-q21.32
    HDHD2 44633.781 18q21.1
    HRH4 22040.593 18q11.2
    IER3IP1 44681.390 18q12
    IMPA2 11981.427 18p11.2
    INO80C 33048.291 18q12.2
    KDSR 60994.971 18q21
    KIAA1468 59854.524 18q21.33
    L3MBTL4 5954.705 18p11.31-p11.23
    LAMA1 6941.743 18p11.3
    LAMA3 21452.984 18q11.2
    LDLRAD4 13611.463 18p11.21
    LINC-ROR 54721.804 18q21.31
    LIPG 47088.427 18q21.1
    LMAN1 56995.056 18q21.3-q22
    MAPRE2 32556.892 18q12.1
    MBD1 47795.216 18q21
    MBP 74690.789 18q23
    MC2R 13882.043 18p11.2
    MC4R 58038.564 18q22
    ME2 48405.432 18q21
    MEP1B 29769.987 18q12.2-q12.3
    METTL4 2537.524 18p11.31
    MEX3C 48700.920 18q21.1
    MIB1 19321.290 18q11.2
    MIR1-2 19408.965 18q11.2
    MIR133A1 19405.659 18q11.2
    MIR187 33484.781 18q12.2
    MIR320C1 19263.471 18q11.2
    MTCL1 8717.369 18p11.22
    MYL12A 3247.528 18p11.31
    MYO5B 47349.156 18q
    MYOM1 3066.805 18p11.31
    NDC80 2571.510 18p11.31
    NEDD4L 55714.458 18q21
    NFATC1 77155.772 18q23
    NOL4 31431.064 18q12
    NPC1 21111.463 18q11.2
    ONECUT2 55102.917 18q21.31
    PARD6G 77915.117 18q23
    PCAT18 24267.585 18q11.2
    PIAS2 44390.023 18q12.1-q12.3
    PIGN 59711.458 18q21.33
    PIK3C3 39535.199 18q12.3
    PMAIP1 57567.192 18q21.32
    POLI 51795.849 18q21.1
    PPP4R1 9546.789 18p11.22
    PSMA8 23713.816 18q11.2
    PSMG2 12702.987 18p11.21
    PSTPIP2 43563.502 18q12
    PTPN2 12785.477 18p11.3-p11.2
    PTPRM 7567.314 18p11.2
    RAB12 8609.443 18p11.22
    RAB27B 52495.708 18q21.2
    RAB31 9708.228 18p11.3
    RALBP1 9475.530 18p11.22
    RAX 56934.267 18q21.31
    RIOK3 21032.787 18q11.2
    RIT2 40323.183 18q12.3
    RNF125 29598.445 18q12.1
    RNF138 29672.569 18q12.1
    RNF152 59482.304 18q21.33
    ROCK1 18529.703 18q11.2
    SALL3 76740.275 18q23
    SERPINB11 61370.193 18q21.33
    SERPINB13 61254.534 18q21.33
    SERPINB2 61554.939 18q21.3
    SERPINB4 61304.493 18q21.33
    SERPINB7 61420.281 18q21.33
    SERPINB8 61637.263 18q22.1
    SIGLEC15 43405.545 18q21.1
    SKA1 47901.392 18q21.1
    SKOR2 44757.494 18q21.1
    SLC14A1 43304.092 18q11-q12
    SMAD7 46446.223 18q21.1
    SMCHD1 2655.886 18p11.32
    SNRPD1 19192.230 18q11.2
    TAF4B 23806.847 18q11.1
    TCF4 52889.562 18q21.1
    TGIF1 3449.411 18p11.31
    THOC1 214.520 18p11.32
    TMEM241 20875.979 18q11.2
    TNFRSF11A 59992.520 18q22.1
    TPGS2 34374.069 18q12.2
    TSHZ1 72922.710 18q22.3
    TTR 29171.730 18q12.1
    TUBB6 12308.257 18p11.21
    TWSG1 9334.765 18p11.3
    TXNL1 54270.053 18q21.31
    TXNL4A 77732.867 18q23
    TYMS 657.604 18p11.31-p11.21
    USP14 158.483 18p11.32
    VAPA 9913.955 18p11.2
    VPS4B 61056.425 18q21.33
    YES1 721.592 18p11.31-p11.21
    ZBTB7C 45553.639 18q21.1
    ZCCHC2 60190.658 18q21.33
    ZNF24 32912.178 18q12
    ZNF271 32870.300 18q12.2
    ZNF521 22641.888 18q11.2

    GeneCards  

    Contributor(s)

    WrittenJul 2004Philippe Dessen, Sakari Knuutila, Jean-Loup Huret
    UpdatedOct 2014Philippe Dessen, Jean-Loup Huret

    Citation

    This paper should be referenced as such :
    Dessen P, Knuutila S, Huret JL . Chromosome . Atlas Genet Cytogenet Oncol Haematol. Jul 2004 .
    URL : http://AtlasGeneticsOncology.org/Indexbychrom/idxa_18.html
    Dessen P, Huret JL . Chromosome . Atlas Genet Cytogenet Oncol Haematol. Oct 2014 .
    URL : http://AtlasGeneticsOncology.org/Indexbychrom/idxa_18.html
    © Atlas of Genetics and Cytogenetics in Oncology and Haematology
    indexed on : Mon Oct 13 15:22:59 CEST 2014


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