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Chromosome 7

Chromosome 7 : G-banding, diagram and R-banding - Claude Léonard, Jean-Loup Huret
Chromosome 7 diagrams ISCN 2009 - Courtesy Nicole Chia

Leukaemia     

t(1;7)(q10;p10)
t(1;7)(p36;q34)
t(1;7)(p34;q34)
t(1;7)(q21;q22)
t(1;7)(p32;q34)
t(2;7)(p11;q21)
t(3;7)(q26;q21)
t(3;7)(q27;p12-13)
t(3;7)(q27;q32)
t(3;7)(q27;q32) FRA7H/BCL6
t(5;7)(q35;q21) TLX3/CDK6
t(5;7)(q33;q11)
t(6;7)(q23;q34)
-7/del(7q) in childhood
-7/del(7q) in adults
del(7q) in non-Hodgkin's lymphoma (NHL)
idic(7)(q11.2)
inv(7)(p15q34)
+7 or trisomy 7 (solely)
t(7;8)(q34;p11)
dic(7;9)(p11-13;p11)
dic(7;9)(p11-12;p12-13) PAX5/LOC392027
t(7;9)(q11;p13)
t(7;9)(q34;q32)
t(7;9)(q34;q34)
t(7;10)(q34;q24)
t(7;11)(p15;p15)
t(7;11)(q35;p13)
t(7;12)(q36;p13)
t(7;12)(p12;q13)
t(7;12)(q34;p13)
t(7;14)(q35;q32.1) TRB@/TCL1A
t(7;14)(p15;q11)
t(7;14)(p15;q32) (AML, T-ALL; - ; rare)
t(7;14)(q21;q13)
t(7;14)(q21;q32) ERVWE1/IgH
t(7;14)(q21;q32) CDK6/IgH
t(7;14)(q22;q11)
t(7;17)(p15;q23)
t(7;17)(q32-34;q23)
t(7;19)(q34;p13)
t(7;21)(p15;q22)
t(7;21)(p22;q22)
t(7;22)(q21;q11)
t(X;7)(q22;q34) IRS4/TCRB

Solid Tumors     

t(1;7)(q32;p21.2)
t(2;7)(q36.1;p21.2)
t(3;7)(p13;p21)
del(7)(q22;q32)
inv(7)(q21q34)
t(7;7)(p21.2;p15)
t(7;8)(q31;q13)
t(7;8)(p22;q12)
t(7;12)(q22;q13-14)
t(7;12)(p22;q13)
t(7;14)(p21;q21)
t(7;15)(p21.3;q21)
t((7;16)(q33;p11)
t(7;17)(p21.2;p13.1)
t(7;17)(p15;q21)
t(7;21)(p21;q22)
t(7;22)(p22;q12)
t(7;22)(p21.2;q11.23)
t(7;22)(p22;q12)

Cancer prone diseases     

Currarino syndrome
Pallister Hall syndrome (PHS)
Hereditary papillary renal cell carcinoma
Shwachman-Diamond syndrome (SDS)
Stiff-person syndrome

All Genes by Location (Kb)
Chromosome 7 by location

Losses / Amplicons     

BONE/SOFT TISSUE

External links     

  • Chromosome 7 - HUGO Chromosomes
  • Chromosome 7 - GoldenPath - Santa Cruz
  • Chromosome 7 - Ensembl Project
  • Chromosome 7 - Map View - NCBI
  • Chromosome 7 - OMIM Gene map
  • Chromosome 7 - Genomic Variants
  • Chromosome 7 - HAPMAP Project
  • Chromosome 7 - Genome Channel - ORNL
  • Chromosome 7 - LaunchPad HGMIS
  • Chromosome 7 - Human Protein Atlas
  • Chromosome 7 - Array BAC clone - Roswell Park Cancer Institute
  • Chromosome 7 - Human BAC Resource (NCBI)
  • Chromosome 7 FISH-mapped BACs (CCAP)
  • Genetic Maps (CHLC)
  • YACs mapped by FISH (Bari)
  • PCP (Partial Chromosome Paints) (Bari)
  • Mouse homology - OMIM - NCBI
  • Chromosome 7 Cancer GeneWeb
  • Chromosome 7 GeneCards (Weizmann)
  • IMGT, the international ImMunoGeneTics database (Montpellier,France)
  • Human Proteomics Initiative (Expasy)

    • Genes

    Annotated genes
    Ordered by Name Ordered by Location
     Kb pter-qter
    ABCB1 87133.179 7q21.12
    ABCB5 20655.245 7p21.1
    ACHE 100487.615 7q22
    ACTB 5566.779 7p22
    AKAP9 91570.189 7q21-q22
    ANLN 36429.432 7p15-p14
    ASNS 97481.429 7q21.3
    BCL7B 72950.683 7q11.23
    BRAF 140433.813 7q34
    CAV1 116165.063 7q31.1
    CLDN4 73245.193 7q11.23
    COL1A2 94023.873 7q22.1
    CREB3L2 137597.557 7q34
    CUX1 101459.184 7q22.1
    CYP2W1 1022.835 7p22.3
    DDC 50526.134 7p12.2
    DLX5 96649.702 7q22
    DMTF1 86781.677 7q21
    EPHA1 143088.205 7q34
    EPHB6 142552.792 7q33-q35
    ERVW-1 91935.631 7q21.2
    ETV1 13930.856 7p21.3
    FSCN1 5632.436 7p22
    GPER 1126.443 7p22.3
    GPNMB 23286.316 7p15
    GRB10 50657.760 7p12.2
    HBP1 106809.406 7q22-q31
    HGF 81331.444 7q21.1
    HIP1 75162.619 7q11.23
    HIPK2 139246.316 7q32-q34
    HOXA11 27220.776 7p15.2
    HOXA9 27202.057 7p15.2
    HSPB1 75931.875 7q11.23
    HUS1 48002.885 7p13-p12
    IKZF1 50344.378 7p13-p11.1
    IL6 22766.766 7p21
    JAZF1 27870.193 7p15.2-p15.1
    LIMK1 73507.486 7q11.23
    MET 116312.459 7q31
    MIR183 129414.745 7q32.2
    MIR196B 27209.099 7p15.2
    MNX1 156797.547 7q36
    MUC17 100663.364 7q22.1
    NAMPT 105888.732 7q22.3
    NPY 24323.807 7p15.1
    NRCAM 107788.071 7q31
    NRF1 129269.919 7q32
    PEG10 94285.637 7q21
    POU6F2 39017.609 7p14.1
    PTN 136912.092 7q33
    SFRP4 37945.535 7p14.1
    SHH 155595.558 7q36
    SPAM1 123565.286 7q31.3
    STEAP1 89783.689 7q21
    STEAP2 89841.174 7q21.13
    TAC1 97361.271 7q21-q22
    TRB 142495.143 7q34
    TRG 38279.625 7p14
    TRIM24 138145.079 7q32-q34
    TRPV6 142568.960 7q34
    TWIST1 19155.091 7p21.2
    Other genes
    possibly implicated
    in cancer
    Ordered by Name Ordered by Location
     Kb pter-qter
    ABCB4 87031.361 7q21.1
    ABCB8 150725.510 7q36
    ABCF2 150904.923 7q36
    ABHD11 73150.425 7q11.23
    ABP1 150549.565 7q36.1
    ACTR3B 152456.834 7q36.1
    ADAM22 87563.566 7q21
    ADAP1 937.537 7p22.3
    ADCK2 140372.953 7q34
    ADCYAP1R1 31092.076 7p14
    AGAP3 150783.826 7q36.1
    AGK 141251.078 7q34
    AGR2 16832.264 7p21.3
    AGR3 16899.030 7p21.1
    AHCYL2 128864.855 7q32.1
    AHR 17338.276 7p15
    AIMP2 6048.882 7p22
    AKR1B10 134212.344 7q33
    AKR1B1 134127.107 7q35
    ALKBH4 102096.667 7q22.1
    AMPH 38423.297 7p14-p13
    AP1S1 100797.686 7q22.1
    AP5Z1 4815.262 7p22.2
    AQP1 30960.915 7p14
    ARAF2P 62864.754 7q11.21
    ARF5 127228.406 7q31.3
    ARHGEF5 144052.489 7q35
    ARMC10 102715.328 7q22.1
    ARPC1A 98923.496 7q22.1
    ARPC1B 98972.298 7q22.1
    ASL 65540.776 7q11.21
    ATP6V0A4 138391.039 7q34
    ATP6V1F 128502.857 7q32
    AUTS2 69063.905 7q11.22
    AZGP1 99564.350 7q22.1
    BAZ1B 72854.728 7q11.23
    BBS9 33169.152 7p14
    BLACE 155149.683 7q36
    BMPER 33944.523 7p14.3
    BPGM 134331.531 7q33
    BRI3 97910.979 7q21.3
    BUD31 99006.601 7q22.1
    C1GALT1 7222.246 7p21.3
    C7orf63 89874.488 7q21.13
    CALCR 93053.799 7q21.3
    CALD1 134464.164 7q33
    CAMK2B 44256.749 7p14.3-p14.1
    CARD11 2945.710 7p22
    CASP2 142986.681 7q34-q35
    CATR1 129546.220 7q32
    CAV2 116139.655 7q31.1
    CBLL1 107384.279 7q22.3
    CBX3 26240.831 7p15.2
    CCDC136 128431.464 7q33
    CCL24 75441.114 7q11.23
    CCL26 75398.842 7q11.23
    CCM2 45067.233 7p13
    CCT6A 56119.378 7p11.2
    CD36 80267.832 7q11.2
    CDK13 39989.959 7p13
    CDK14 90338.712 7q21-q22
    CDK5 150750.902 7q36
    CDK6 92234.235 7q21-q22
    CFTR 117120.017 7q31.2
    CHN2 29519.486 7p15.3
    CHPF2 150929.585 7q36.1
    CHST12 2443.195 7p22
    CLDN12 90032.648 7q21
    CLDN3 73183.327 7q11.23
    CNTNAP2 145813.453 7q35
    COG5 106848.298 7q31
    COPG2 130146.080 7q32
    COPS6 99686.583 7q22.1
    CPA4 129932.974 7q32
    CRHR2 30691.559 7p14.3
    CUL1 148395.933 7q36.1
    CYCS 25158.270 7p15.3
    CYP3A43 99425.636 7q21.1
    CYP3A4 99354.583 7q21.1
    CYP3A5 99245.813 7q21.1
    CYP3A7 99302.660 7q21-q22.1
    CYTH3 6201.412 7p22.1
    DBF4 87505.544 7q21.3
    DDX56 44605.016 7p13
    DFNA5 24737.974 7p15
    DGKB 14184.674 7p21.2
    DLD 107531.586 7q31-q32
    DLX6 96635.290 7q22
    DNAJB6 157129.710 7q36.3
    DNAJB9 108210.189 7q31|14q24.2-q24.3
    DNAJC2 102952.921 7q22
    DPP6 153584.419 7q36.2
    DTX2P1-UPK3BP1-PMS2P11 76610.139 7q11.23
    DYNC1I1 95401.818 7q21.3-q22.1
    EEPD1 36192.836 7p14.2
    EGFR 55086.725 7p12
    EIF3B 2394.474 7p22.3
    EIF4H 73588.706 7q11.23
    ELMO1 36892.511 7p14.1
    ELN 73442.427 7q11.23
    EN2 155250.824 7q36
    EPDR1 37960.163 7p14.1
    EPHB4 100400.187 7q22
    EPO 100318.423 7q22
    ERV3-1 64450.733 7q11.2
    EXOC4 132937.823 7q31
    EZH2 148504.464 7q35-q36
    FAM131B 143050.493 7q34
    FAM3C 120988.905 7q31
    FASTK 150773.708 7q35
    FBXL18 5515.428 7p22.2
    FEZF1 121941.448 7q31.32
    FGL2 76822.688 7q11.23
    FLNC 128470.483 7q32-q35
    FOXP2 114055.052 7q31
    FTSJ2 2273.926 7p22
    FZD1 90893.783 7q21
    FZD9 72848.109 7q11.23
    GARS 30634.181 7p15
    GBAS 56032.270 7p12
    GCK 44183.870 7p15.3-p15.1
    GGCT 30536.237 7p15-p14
    GHRHR 31003.636 7p14
    GIMAP4 150264.458 7q36.1
    GLI3 42000.548 7p13
    GNA12 2767.741 7p22.2
    GNAI1 79765.071 7q21
    GNB2 100271.363 7q22
    GNG11 93551.016 7q21
    GNGT1 93535.820 7q21.3
    GRM3 86273.230 7q21.1-q21.2
    GSTK1 142960.522 7q34
    GTF2I 74072.030 7q11.23
    GUSB 65425.673 7q21.11
    HDAC9 18126.572 7p21.1
    HECW1 43152.198 7p13
    HILPDA 128095.884 7q32.1
    HNRNPA2B1 26229.556 7p15
    HOXA10 27210.210 7p15.2
    HOXA13 27236.499 7p15.2
    HOXA1 27132.614 7p15.3
    HOXA4 27168.126 7p15.2
    HOXA5 27180.671 7p15.2
    HOXA@ 27132.614 7p15.2
    HOXA7 27193.338 7p15.2
    HPVC1 54268.917 7p11.2
    IGF2BP3 23349.828 7p11
    IGFBP1 45927.959 7p13-p12
    IGFBP3 45951.844 7p13-p12
    IMPDH1 128032.331 7q31.3-q32
    ING3 120590.817 7q31
    INHBA 41728.601 7p15-p13
    INSIG1 155089.486 7q36
    IRF5 128580.772 7q32
    ITGB8 20370.725 7p21.1
    JHDM1D 139784.546 7q34
    KCNH2 150642.044 7q36.1
    KIAA1549 138516.127 7q34
    KLHL7 23145.353 7p15.3
    KLRG2 139138.088 7q34
    KMT2C 151832.010 7q36.1
    KMT2E 104654.637 7q22.1
    KPNA7 98771.197 7q22.1
    KRIT1 91828.283 7q21.2
    LAMB1 107564.246 7q22
    LAT2 73624.087 7q11.23
    LEP 127881.331 7q31.3
    LFNG 2559.479 7p22.2
    LMTK2 97736.197 7q21.3
    LOC407835 128766.325 7q32.3
    LRRC17 102553.344 7q22.1
    LRRC4 127667.124 7q31.3
    LUZP6 135611.503 7q33
    MACC1 20174.279 7p21.1
    MAD1L1 1855.428 7p22
    MAFK 1570.368 7p22.3
    MAGI2 77646.374 7q21
    MCM7 99690.404 7q21.3-q22.1
    MEOX2 15650.837 7p22.1-p21.3
    MEST 130131.899 7q32
    MIR106B 99691.616 7q22.1
    MIR129-1 127847.925 7q32.1
    MIR148A 25989.539 7p15.2
    MIR153-2 157367.028 7q36.3
    MIR182 129410.223 7q32.2
    MIR25 99691.183 7q22.1
    MIR29A 130561.506 7q32.3
    MIR29B1 130562.218 7q32.3
    MIR335 130135.952 7q32.2
    MIR339 1062.569 7p22.3
    MIR489 93113.248 7q21.3
    MIR490 136587.914 7q33
    MIR93 99691.391 7q22.1
    MIR96 129414.533 7q32.2
    MKLN1 130794.855 7q32
    MKRN1 140155.983 7q34
    MLXIPL 73007.524 7q11.23
    MOGAT3 100839.013 7q22.1
    MPLKIP 40172.342 7p14.1
    MPP6 24613.085 7p15
    MTERF 91502.021 7q21-q22
    MUC3A 100551.247 7q22
    MYH16 98870.924 7q22.1
    NCAPG2 158424.003 7q36.3
    NCF1 74188.309 7q11.23
    NCF1C 74572.384 7q11.23
    NOD1 30464.143 7p15-p14
    NOM1 156742.417 7q36.3
    NOS3 150688.144 7q36
    NPTX2 98246.597 7q21.3-q22.1
    NT5C3A 33053.725 7p14.3
    NUB1 151038.847 7q36
    NUDT1 2281.857 7p22
    NUP205 135242.662 7q33
    NUPL2 23221.446 7p15
    NXPH1 8473.585 7p22
    ORC5 103766.788 7q22.1
    PAX4 127250.346 7q32
    PAXIP1 154735.400 7q36
    PDGFA 536.897 7p22
    PDIA4 148700.154 7q35
    PDK4 95212.809 7q21.3
    PGAM2 44102.326 7p13-p12
    PHF14 11013.499 7p21.3
    PHKG1 56147.976 7p11.2
    PIK3CG 106505.924 7q22.3
    PIP 142829.174 7q34
    PKD1L1 47814.250 7p12.3
    PLEKHA8 30067.977 7p21-p11.2
    PLXNA4 132068.247 7q32.3
    PMPCB 102937.873 7q22.1
    PMS2 6012.870 7p22.2
    PMS2CL 6774.936 7p22.1
    PMS2L2 72476.589 7q11.23
    PMS2P1 99918.537 7q22.1
    PMS2P3 75137.069 7q11.23
    PMS2P4 66757.423 7q11.22
    PNPLA8 108110.866 7q31
    PODXL 131185.021 7q32-q33
    POLD2 44154.279 7p13
    POLM 44111.847 7p13
    POLR2J 102113.548 7q22.1
    POM121 72349.936 7q11.23
    PON1 94927.669 7q21.3
    PON2 95034.174 7q21.3
    POR 75544.420 7q11.2
    POT1 124462.440 7q31.33
    PPIA 44836.241 7p13
    PPP1R3A 113516.882 7q31.1
    PPP1R9A 94536.949 7q21.3
    PRKAG2 151253.201 7q36.1
    PRKAR1B 588.834 7p22
    PRKAR2B 106685.178 7q22
    PRSS1 142457.319 7q34
    PRSS2 142479.908 7q34
    PRSS3P2 142478.757 7q34
    PSPH 56078.744 7p11.2
    PTPN12 77167.352 7q11.23
    PTPRN2 157331.750 7q36
    PTPRZ1 121513.159 7q31.3
    PURB 44915.892 7p13
    RAB19 140103.843 7q34
    RABGEF1 66205.643 7q11.21
    RABL5 100956.648 7q22.1
    RAC1 6414.126 7p22
    RADIL 4838.740 7p22.1
    RALA 39663.152 7p15-p13
    RAMP3 45197.367 7p13-p12
    RAPGEF5 22157.908 7p15.3
    RARRES2 150035.407 7q36.1
    RBAK 5085.452 7p22.1
    RELN 103112.231 7q22
    RFC2 73645.832 7q11.23
    RHBDD2 75508.317 7q11.23
    RHEB 151163.098 7q36
    RINT1 105172.532 7q22.3
    RNF133 122337.766 7q31.32
    RNF148 122341.720 7q31.33
    RNF216 5659.672 7p22.1
    RNF32 156433.441 7q36
    RPA3 7676.575 7p22
    SAMD9 92728.826 7q21.2
    SBDS 66452.690 7q11.21
    SCRN1 29959.719 7p14.3-p14.1
    SEC61G 54819.940 7p11.2
    SEMA3A 83587.659 7p12.1
    SEMA3C 80371.854 7q21-q31
    SEMA3D 84624.872 7q21.11
    SEMA3E 82993.222 7q21.11
    SEPT7 35840.596 7p14.2
    SERPINE1 100770.370 7q22.1
    SGCE 94214.536 7q21.3
    SH2B2 101928.405 7q22
    SHFM1 96318.079 7q21.3
    SKAP2 26706.688 7p15.2
    SLC25A13 95749.532 7q21.3
    SLC26A3 107405.912 7q31
    SLC26A4 107301.080 7q31
    SLC26A5 103014.655 7q22.1
    SLC29A4 5322.561 7p22.1
    SLC4A2 150755.299 7q36.1
    SMARCD3 150936.059 7q35-q36
    SMO 128828.713 7q32.3
    SMURF1 98625.058 7q22.1
    SND1 127292.202 7q31.3
    SND1-IT1 127637.855 7q31
    SOSTDC1 16501.106 7p21.1
    SP4 21467.689 7p15.3
    SRI 87837.518 7q21.1
    SRPK2 104756.823 7q22-q31.1
    SRRT 100472.701 7q21
    SSBP1 141438.407 7q34
    ST7 116593.381 7q31.2
    STAG3 99775.538 7q22.1
    STEAP4 87905.744 7q21.12
    STK17A 43622.692 7p13
    STK31 23749.945 7p15.3
    STX1A 73113.535 7q11.23
    TARP 38299.244 7p15-p14
    TAS2R38 141672.431 7q34
    TAX1BP1 27779.714 7p15
    TBRG4 45139.699 7p13
    TBXAS1 139528.952 7q34-q35
    TES 115850.547 7q31.2
    TFEC 115575.202 7q31.2
    TFPI2 93514.709 7q22
    TFR2 100218.039 7q22
    THAP5 108202.671 7q31.1
    TMEM120A 75616.155 7q11.23
    TMEM176A 150497.854 7q36.1
    TMEM176B 150488.376 7q36.1
    TMEM209 129804.555 7q32.2
    TNPO3 128594.234 7q32.1
    TNS3 47314.752 7p12.3
    TP53TG1 86954.541 7q21.1
    TRA2A 23544.401 7p15.3
    TRGV9 38299.243 7p14
    TRIP6 100464.950 7q22
    TRPV5 142605.648 7q35
    TRRAP 98476.113 7q21.2-q22.1
    TSL 27657.033 7p15.2
    TSPAN12 120427.374 7q31.31
    TSPAN13 16793.351 7p21.1
    UBE2D4 43966.035 7p13
    UBE2H 129470.573 7q32
    UBE3C 156931.655 7q36.3
    UPK3B 76139.745 7q11.2
    UPP1 48128.746 7p12.3
    URGCP 43915.501 7p13
    USP42 6144.550 7p22.1
    VGF 100805.790 7q22.1
    VIPR2 158820.866 7q36.3
    VOPP1 55538.306 7p11.2
    WASL 123321.997 7q31.3
    WNT16 120965.421 7q31
    WNT2 116916.686 7q31.2
    XRCC2 152343.587 7q36.1
    YKT6 44240.578 7p15.1
    YWHAG 75956.108 7q11.23
    ZC3HC1 129658.126 7q32.2
    ZYX 143078.360 7q32

    GeneCards  

    Contributor(s)

    WrittenJul 2004Philippe Dessen, Sakari Knuutila, Jean-Loup Huret
    UpdatedJun 2013Jean-Loup Huret, Philippe Dessen

    Citation

    This paper should be referenced as such :
    Dessen P, Knuutila S, Huret JL . Chromosome . Atlas Genet Cytogenet Oncol Haematol. Jul 2004 .
    URL : http://AtlasGeneticsOncology.org/Indexbychrom/idxa_7.html
    Dessen P, Huret JL . Chromosome . Atlas Genet Cytogenet Oncol Haematol. Jun 2013 .
    URL : http://AtlasGeneticsOncology.org/Indexbychrom/idxa_7.html
    © Atlas of Genetics and Cytogenetics in Oncology and Haematology
    indexed on : Fri Jun 14 18:18:04 CEST 2013
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