Atlas of Genetics and Cytogenetics in Oncology and Haematology


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List of all cancer genes by chromosome

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

- chromosome 9 -
SymbolGoldenPath (Mb)LocationDescription
FOXD4 106.235 9p24.3 forkhead box D4
KANK1 696.896 9p24.3 KN motif and ankyrin repeat domains 1
SMARCA2 2005.342 9p24.3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
SLC1A1 4480.444 9p24 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
AK3 4701.158 9p24.1 adenylate kinase 3
JAK2 4975.245 9p24 Janus kinase 2 (a protein tyrosine kinase)
INSL4 5221.419 9p24 insulin-like 4 (placenta)
RLN2 5289.868 9pter-q12 relaxin 2
RLN1 5324.969 9pter-q12 relaxin 1
CD274 5440.559 9p24.1 CD274 molecule
PDCD1LG2 5500.570 9p24.2 programmed cell death 1 ligand 2
MLANA 5880.909 9p24.1 melan-A
TPD52L3 6318.375 9p24.1 tumor protein D52-like 3
UHRF2 6403.151 9p24.1 ubiquitin-like, containing PHD and RING finger domains, 2
JMJD2C 6747.654 9p24-p23 jumonji domain containing 2C
PTPRD 8304.247 9p24.1-p23 protein tyrosine phosphatase, receptor type, D
TYRP1 12683.449 9p23 tyrosinase-related protein 1
NFIB 14071.848 9p24.1 nuclear factor I/B
PSIP1 15460.644 9p22.2 PC4 and SFRS1 interacting protein 1
SH3GL2 17569.194 9p22 SH3-domain GRB2-like 2
ADAMTSL1 18464.104 9p21.3 ADAMTS-like 1
ADFP 19105.760 9p22.1 adipose differentiation-related protein
RPS6 19366.254 9p21 ribosomal protein S6
MLLT3 20334.968 9p22 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
IFNB1 21067.105 9p22 interferon, beta 1, fibroblast
IFNA17 21217.242 9p22 interferon, alpha 17
IFNA13 21357.424 9p22 interferon, alpha 13
IFNA1 21430.440 9p22 interferon, alpha 1
MTAP 21792.635 9p21 methylthioadenosine phosphorylase
CDKN2A 21957.752 9p21 cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)
CDKN2B 21992.906 9p21 cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)
TUSC1 25666.394 9p21.2 tumor suppressor candidate 1
PLAA 26894.518 9p21 phospholipase A2-activating protein
TEK 27099.286 9p21 TEK tyrosine kinase, endothelial (venous malformations, multiple cutaneous and mucosal)
C9orf14 27235.683 9p21 chromosome 9 open reading frame 14
ACO1 32374.601 9p21.1 aconitase 1, soluble
DDX58 32445.301 9p12 DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
TOPORS 32530.543 9p21 topoisomerase I binding, arginine/serine-rich
TAF1L 32619.452 9p21.1 TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like
APTX 32962.609 9p13.3 aprataxin
DNAJA1 33015.209 9p13.3 DnaJ (Hsp40) homolog, subfamily A, member 1
B4GALT1 33100.642 9p13 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1
BAG1 33242.470 9p12 BCL2-associated athanogene
AQP3 33431.162 9p13 aquaporin 3 (Gill blood group)
PTENP1 33665.634 9p21 phosphatase and tensin homolog (mutated in multiple advanced cancers 1), pseudogene 1
UBE2R2 33807.182 9p11.2 ubiquitin-conjugating enzyme E2R 2
UBAP1 34169.011 9p13.3 ubiquitin associated protein 1
NUDT2 34319.504 9p13 nudix (nucleoside diphosphate linked moiety X)-type motif 2
CNTFR 34541.431 9p13 ciliary neurotrophic factor receptor
OPRS1 34624.720 9p13.3 opioid receptor, sigma 1
GALT 34636.635 9p13 galactose-1-phosphate uridylyltransferase
IL11RA 34643.932 9p13 interleukin 11 receptor, alpha
CCL27 34651.893 9p13 chemokine (C-C motif) ligand 27
CCL19 34679.569 9p13 chemokine (C-C motif) ligand 19
CCL21 34699.004 9p13 chemokine (C-C motif) ligand 21
DNAJB5 34979.785 9p DnaJ (Hsp40) homolog, subfamily B, member 5
VCP 35046.561 9p13-p12 valosin-containing protein
FANCG 35063.835 9p13 Fanconi anemia, complementation group G
PIGO 35078.690 9p13.2 phosphatidylinositol glycan anchor biosynthesis, class O
STOML2 35089.893 9p13.1 stomatin (EPB72)-like 2
TESK1 35595.281 9p13 testis-specific kinase 1
CD72 35599.976 9p CD72 molecule
C9orf100 35649.341 9 chromosome 9 open reading frame 100
CA9 35663.915 9p12 carbonic anhydrase IX
TLN1 35687.334 9p23-p21 talin 1
NPR2 35782.406 9p21-p12 natriuretic peptide receptor B/guanylate cyclase B (atrionatriuretic peptide receptor B)
C9orf127 35819.513 9p13.3 chromosome 9 open reading frame 127
RECK 36026.916 9p13.3 reversion-inducing-cysteine-rich protein with kazal motifs
GNE 36204.441 9p13.1 glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
RNF38 36326.401 9p ring finger protein 38
MELK 36562.905 9p13.1 maternal embryonic leucine zipper kinase
PAX5 36828.531 9p13.2 paired box 5
GRHPR 37412.707 9q12 glyoxylate reductase/hydroxypyruvate reductase
RAB1C 37626.933 9p13.1 RAB1C, member RAS oncogene family pseudogene
ALDH1B1 38382.702 9p13 aldehyde dehydrogenase 1 family, member B1
IGFBPL1 38398.992 9p12 insulin-like growth factor binding protein-like 1
FOXD4L4 69666.445 9q13 forkhead box D4-like 4
PIP5K1B 70510.436 9q13 phosphatidylinositol-4-phosphate 5-kinase, type I, beta
PRKACG 70817.271 9q13 protein kinase, cAMP-dependent, catalytic, gamma
FXN 70840.164 9q21.11 frataxin
TJP2 70978.909 9q13-q21 tight junction protein 2 (zona occludens 2)
SMC5 72063.698 9q21.11 structural maintenance of chromosomes 5
KLF9 72189.335 9q21.11 Kruppel-like factor 9
GDA 73954.113 9q21.13 guanine deaminase
ALDH1A1 74705.408 9q21.13 aldehyde dehydrogenase 1 family, member A1
ANXA1 74956.601 9q21.13 annexin A1
RORB 76302.072 9q22 RAR-related orphan receptor B
TRPM6 76527.231 9q21.13 transient receptor potential cation channel, subfamily M, member 6
GCNT1 78246.402 9q13 glucosaminyl (N-acetyl) transferase 1, core 2 (beta-1,6-N-acetylglucosaminyltransferase)
PCA3 78569.171 9q21-q22 prostate cancer antigen 3 (non-protein coding)
PRUNE2 78628.003 9q21.32 prune homolog 2 (Drosophila)
FOXB2 78824.391 9q21.2 forkhead box B2
GNA14 79228.369 9q21 guanine nucleotide binding protein (G protein), alpha 14
GNAQ 79525.020 9q21 guanine nucleotide binding protein (G protein), q polypeptide
PSAT1 80101.879 9q21.2 phosphoserine aminotransferase 1
TLE1 83388.420 9q21.32 transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)
RASEF 84787.137 9q21.33 RAS and EF-hand domain containing
FRMD3 85052.127 9q21.33 FERM domain containing 3
HNRNPK 85772.912 9q21.32-q21.33 heterogeneous nuclear ribonucleoprotein K
HNRPK 85772.912 9q21.32-q21.33 heterogeneous nuclear ribonucleoprotein K
RMI1 85785.457 9q22.1 RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)
NTRK2 86473.286 9q22.1 neurotrophic tyrosine kinase, receptor, type 2
GOLM1 87830.880 9q21.33 golgi membrane protein 1
GAS1 88749.097 9q21.3-q22 growth arrest-specific 1
DAPK1 89302.576 9q34.1 death-associated protein kinase 1
CTSL1 89530.794 9q21.33 cathepsin L1
CCRK 89771.181 9q22.2 cell cycle related kinase
SPIN1 90193.117 9q22.1 spindlin 1
EDG3 90796.182 9q22.1-q22.2 sphingosine-1-phosphate receptor 3
S1PR3 90796.182 9q22.1-q22.2 sphingosine-1-phosphate receptor 3
SHC3 90817.889 9q22.1 SHC (Src homology 2 domain containing) transforming protein 3
CKS2 91115.933 9q22 CDC28 protein kinase regulatory subunit 2
SEMA4D 91181.972 9q22-q31 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
GADD45G 91409.748 9q22.1-q22.2 growth arrest and DNA-damage-inducible, gamma
DIRAS2 92411.934 9q22.2 DIRAS family, GTP-binding RAS-like 2
SYK 92603.891 9q22 spleen tyrosine kinase
ROR2 93524.705 9q22 receptor tyrosine kinase-like orphan receptor 2
OGN 94186.070 9q22 osteoglycin
OMD 94216.359 9q22.31 osteomodulin
ECM2 94297.420 9q22.3 extracellular matrix protein 2, female organ and adipocyte specific
BICD2 94513.467 9q22.32 bicaudal D homolog 2 (Drosophila)
NINJ1 94923.592 9q22 ninjurin 1
WNK2 94987.033 9q22.3 WNK lysine deficient protein kinase 2
FBP2 96360.826 9q22.3 fructose-1,6-bisphosphatase 2
FANCC 96901.159 9q22.3 Fanconi anemia, complementation group C
PTCH1 97245.085 9q22.1-q31 patched homolog 1 (Drosophila)
C9orf102 97774.970 9q22.32 chromosome 9 open reading frame 102
SLC35D2 98122.810 9q22.33 solute carrier family 35, member D2
CDC14B 98302.218 9q22.3 CDC14 cell division cycle 14 homolog B (S. cerevisiae)
CTSL2 98834.761 9q22.33 cathepsin L2
TMOD1 99326.258 9q22 tropomodulin 1
XPA 99477.012 9q22.3 xeroderma pigmentosum, complementation group A
FOXE1 99655.358 9q22 forkhead box E1 (thyroid transcription factor 2)
HEMGN 99728.896 9q22.33 hemogen
ANP32B 99785.310 9q22.32 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B
NANS 99858.842 9p24.1-p23 N-acetylneuraminic acid synthase (sialic acid synthase)
GALNT12 100609.802 9q22.33 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)
TGFBR1 100907.233 9q22 transforming growth factor, beta receptor I (activin A receptor type II-like kinase, 53kDa)
SEC61B 101024.391 9q22.32-q31.3 Sec61 beta subunit
NR4A3 101623.958 9q22 nuclear receptor subfamily 4, group A, member 3
TMEFF1 102275.538 9q31 transmembrane protein with EGF-like and two follistatin-like domains 1
ALDOB 103223.480 9q21.3-q22.2 aldolase B, fructose-bisphosphate
RNF20 103335.954 9q22 ring finger protein 20
PPP3R2 103393.720 9q31 protein phosphatase 3 (formerly 2B), regulatory subunit B, beta isoform
SMC2 105896.362 9q31.1 structural maintenance of chromosomes 2
TAL2 107464.599 9q32 T-cell acute lymphocytic leukemia 2
RAD23B 109085.365 9q31.2 RAD23 homolog B (S. cerevisiae)
KLF4 109286.956 9q31 Kruppel-like factor 4 (gut)
IKBKAP 110669.622 9q31 inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein
CTNNAL1 110744.672 9q31.2 catenin (cadherin-associated protein), alpha-like 1
EPB41L4B 110974.076 9q22.1-q22.3 erythrocyte membrane protein band 4.1 like 4B
PTPN3 111180.339 9q31 protein tyrosine phosphatase, non-receptor type 3
TXN 112046.131 9q31 thioredoxin
MUSK 112470.960 9q31.3-q32 muscle, skeletal, receptor tyrosine kinase
EDG2 112675.877 9q lysophosphatidic acid receptor 1
LPAR1 112675.877 9q lysophosphatidic acid receptor 1
GNG10 113463.682 9q31.3 guanine nucleotide binding protein (G protein), gamma 10
UGCG 113699.027 9q31 UDP-glucose ceramide glucosyltransferase
SLC46A2 114681.022 9q32 solute carrier family 46, member 2
POLE3 115209.342 9q33 polymerase (DNA directed), epsilon 3 (p17 subunit)
RGS3 115382.761 9q32 regulator of G-protein signaling 3
AMBP 115862.231 9q32-q33 alpha-1-microglobulin/bikunin precursor
ORM1 116125.124 9q31-qter orosomucoid 1
ORM2 116131.890 9q31-qter orosomucoid 2
TNFSF15 116591.434 9q32 tumor necrosis factor (ligand) superfamily, member 15
TNFSF8 116704.945 9q33 tumor necrosis factor (ligand) superfamily, member 8
TNC 116822.626 9q32-q34 tenascin C (hexabrachion)
DEC1 116943.918 9q32 deleted in esophageal cancer 1
PAPPA 117955.892 9q33.1 pregnancy-associated plasma protein A, pappalysin 1
ASTN2 118227.328 9q33 astrotactin 2
TRIM32 118489.402 9q33.1 tripartite motif-containing 32
TLR4 119506.431 9q33.1 toll-like receptor 4
DBC1 120968.729 9q32-q33 deleted in bladder cancer 1
CDK5RAP2 122190.969 9q33.3 CDK5 regulatory subunit associated protein 2
FBXW2 122559.075 9q34 F-box and WD repeat domain containing 2
PHF19 122657.752 9q34.11 PHD finger protein 19
TRAF1 122704.493 9q33-q34 TNF receptor-associated factor 1
CEP110 122890.395 9q33.2 centrosomal protein 110kDa
RAB14 122980.237 9q32-q34.11 RAB14, member RAS oncogene family
GGTA1 123257.139 9q33.2 glycoprotein, alpha-galactosyltransferase 1
DAB2IP 123544.885 9q33.1-q33.3 DAB2 interacting protein
LHX6 124004.679 9q33.2 LIM homeobox 6
PTGS1 124173.050 9q32-q33.3 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
NEK6 126060.070 9q33.3-q34.11 NIMA (never in mitosis gene a)-related kinase 6
NR5A1 126283.337 9q33 nuclear receptor subfamily 5, group A, member 1
NR6A1 126324.524 9q33.3 nuclear receptor subfamily 6, group A, member 1
HSPA5 127036.955 9q33.3 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
MAPKAP1 127323.572 9q34.11 mitogen-activated protein kinase associated protein 1
PBX3 127549.487 9q33.3 pre-B-cell leukemia homeobox 3
RALGPS1 128716.874 9q33.3 Ral GEF with PH domain and SH3 binding motif 1
ANGPTL2 128889.449 9q34 angiopoietin-like 2
SH2D3C 129540.419 9q33.1-q33.3 SH2 domain containing 3C
CDK9 129588.126 9q34.1 cyclin-dependent kinase 9
FPGS 129604.975 9cen-q34 folylpolyglutamate synthase
ENG 129617.112 9q33-q34.1 endoglin (Osler-Rendu-Weber syndrome 1)
AK1 129668.580 9q34.1 adenylate kinase 1
PIP5KL1 129723.631 9q34.13 phosphatidylinositol-4-phosphate 5-kinase-like 1
LCN2 129951.553 9q34 lipocalin 2
CIZ1 129968.166 9q34.1 CDKN1A interacting zinc finger protein 1
DNM1 130005.484 9q34 dynamin 1
SET 130491.682 9q34 SET nuclear oncogene
PKN3 130504.623 9q34.13 protein kinase N3
ENDOG 130620.600 9q34.1 endonuclease G
PPP2R4 130913.434 9q34 protein phosphatase 2A activator, regulatory subunit 4
IER5L 130977.652 9q34.11 immediate early response 5-like
PRRX2 131467.741 9q34.11 paired related homeobox 2
PTGES 131540.433 9q34.3 prostaglandin E synthase
C9orf78 131629.386 9q34.2 chromosome 9 open reading frame 78
FNBP1 131689.287 9q34 formin binding protein 1
ASS1 132309.915 9q34.1 argininosuccinate synthetase 1
ABL1 132579.089 9q34.1 c-abl oncogene 1, receptor tyrosine kinase
LAMC3 132874.325 9q31-q34 laminin, gamma 3
NUP214 132990.802 9q34 nucleoporin 214kDa
RAPGEF1 133441.979 9q34.3 Rap guanine nucleotide exchange factor (GEF) 1
SETX 134126.649 9q34 senataxin
TTF1 134240.760 9q34.3 transcription termination factor, RNA polymerase I
DDX31 134503.071 9q34.2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 31
TSC1 134776.208 9q34 tuberous sclerosis 1
GFI1B 134843.919 9q34.13 growth factor independent 1B transcription repressor
CEL 134927.186 9q34.3 carboxyl ester lipase (bile salt-stimulated lipase)
CELP 134947.746 9q34.3 carboxyl ester lipase pseudogene
RALGDS 134962.929 9q34.3 ral guanine nucleotide dissociation stimulator
ABO 135120.384 9q34.2 ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)
RPL7A 135204.890 9q34 ribosomal protein L7a
SURF1 135208.487 9q33-q34 surfeit 1
ADAMTS13 135276.941 9q34 ADAM metallopeptidase with thrombospondin type 1 motif, 13
VAV2 135616.838 9q34.1 vav 2 guanine nucleotide exchange factor
BRD3 135887.784 9q34 bromodomain containing 3
RXRA 136358.231 9q34.3 retinoid X receptor, alpha
KIAA0649 137511.469 9q34.3 KIAA0649
PAEP 137593.425 9q34 progestagen-associated endometrial protein (placental protein 14, pregnancy-associated endometrial alpha-2-globulin, alpha uterine protein)
LHX3 138227.919 9q34.3 LIM homeobox 3
GPSM1 138348.726 9q34.3 G-protein signaling modulator 1 (AGS3-like, C. elegans)
CARD9 138378.229 9q34 caspase recruitment domain family, member 9
SDCCAG3 138416.196 9q34.3 serologically defined colon cancer antigen 3
INPP5E 138442.893 9q34.3 inositol polyphosphate-5-phosphatase, 72 kDa
NOTCH1 138508.717 9q34.3 Notch homolog 1, translocation-associated (Drosophila)
AGPAT2 138687.416 9q34.3 1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)
C9orf86 138822.195 9q34.3 chromosome 9 open reading frame 86
EDF1 138877.054 9q34.3 endothelial differentiation-related factor 1
TRAF2 138900.786 9q34 TNF receptor-associated factor 2
PTGDS 138991.777 9q34.2-q34.3 prostaglandin D2 synthase 21kDa (brain)
NPDC1 139053.744 9q34.3 neural proliferation, differentiation and control, 1
MAN1B1 139101.200 9q34.3 mannosidase, alpha, class 1B, member 1
GRIN1 139153.430 9q34.3 glutamate receptor, ionotropic, N-methyl D-aspartate 1
TUBB2C 139255.532 9q34.3 tubulin, beta 2C
COBRA1 139269.580 9q34 cofactor of BRCA1
NOXA1 139437.668 9q34.3 NADPH oxidase activator 1
MRPL41 139566.165 9q34.3 mitochondrial ribosomal protein L41


These entries belong to a list of genes implicated in cancer which is a compilation of genes
from Atlas of Genetics and Cytogenetics and some other genes selected for their interest.


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