Atlas of Genetics and Cytogenetics in Oncology and Haematology

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Chromosome 15

Chromosome 15 : G-banding, diagram and R-banding - Claude Léonard, Jean-Loup Huret
Chromosome 15 diagrams ISCN 2009 - Courtesy Nicole Chia

Leukaemia     

dic(1;15)(p11;p11)
t(5;15)(p15;q11-13)
t(5;15)(q33;q22)
t(11;15)(q23;q14)
t(12;15)(p13;q25)
t(14;15)(q32;q11-13)
15q13-15 Rearrangements
+15 or trisomy 15 (as sole autosomal abnormality)
t(15;17)(q22;q21)
t(15;17)(q22;q21) in treatment related leukemia
t(15;21)(q22;q22)

Solid Tumors     

t(7;15)(p21.3;q21)
t(9;17)(q22;q11)
t(9;15)(q22;q21)
t(6;9)(q22-23;p23-24)
t(12;15)(p13;q25)
t(11;22)(q24;q12)
t(15;19)(q14;p13)

Cancer prone diseases     

Bloom syndrome

All Genes by Location (Kb)
Chromosome 15 by location

Losses / Amplicons     

BONE/SOFT TISSUE

External links     

  • Chromosome 15 - HUGO Chromosomes
  • Chromosome 15 - GoldenPath - Santa Cruz
  • Chromosome 15 - Ensembl Project
  • Chromosome 15 - Map View - NCBI
  • Chromosome 15 - GDB (Genome Data Base)
  • Chromosome 15 - OMIM Gene map
  • Chromosome 15 - Genomic Variants
  • Chromosome 15 - HAPMAP Project
  • Chromosome 15 - Genome Channel - ORNL
  • Chromosome 15 - LaunchPad HGMIS
  • Chromosome 15 - Human Protein Atlas
  • Chromosome 15 - SpliceNest
  • Chromosome 15 - Array BAC clone - Roswell Park Cancer Institute
  • Chromosome 15 Human BAC Resource (NCBI)
  • Chromosome 15 FISH-mapped BACs (CCAP)
  • Genetic Maps (CHLC)
  • YACs mapped by FISH (Bari)
  • PCP (Partial Chromosome Paints) (Bari)
  • Mouse homology - OMIM - NCBI
  • Chromosome 15 Cancer GeneWeb
  • Chromosome 15 GeneCards (Weizmann)
  • Human Proteomics Initiative (Expasy)

    • Genes

    Annotated genes
    Ordered by Name Ordered by Location
     Kb pter-qter
    NBEAP1 20874.797 15q11.2
    UBE3A 25582.396 15q11.2
    TRPM1 31293.264 15q13.3
    NUTM1 34638.066 15q14
    THBS1 39873.280 15q15
    BUB1B 40453.210 15q15
    PLCB2 40580.098 15q15.1
    CASC5 40886.447 15q14
    SPINT1 41136.643 15q13.3
    TYRO3 41851.220 15q15.1-q21.1
    SHC4 49115.934 15q21.1-q21.2
    COPS2 49417.471 15q21.2
    MAPK6 52311.411 15q21
    TCF12 57210.833 15q21
    ADAM10 58888.510 15q2
    GCNT3 59903.982 15q22
    KIAA0101 64657.211 15q22
    ITGA11 68594.042 15q22.3-q23
    PKM 72491.370 15q23
    PML 74287.014 15q24.1
    NEIL1 75639.960 15q33.33
    CTSH 79214.092 15q25.1
    RASGRF1 79252.289 15q24
    NTRK3 88520.596 15q24-q25
    BLM 91260.579 15q26.1
    FURIN 91411.885 15q26.1
    IGF1R 99192.761 15q26.3
    Other genes
    possibly implicated
    in cancer
    Ordered by Name Ordered by Location
     Kb pter-qter
    CHEK2P2 20487.997 15q11.1
    CT60 21145.767 15q11.2
    CYFIP1 22955.755 15q11
    NIPA2 23004.684 15q11.2
    NDN 23930.554 15q11-q12
    SNRPN 25200.135 15q12
    SNURF 25200.135 15q12
    PAR1 25380.789 15q11.2
    ATP10A 25923.860 15q12
    GABRB3 26788.694 15q12
    OCA2 28000.023 15q11.2-q12
    HERC2 28356.183 15q13
    APBA2 29213.840 15q11-q12
    NDNL2 29560.353 15q13.1
    TJP1 29992.357 15q13
    CHRFAM7A 30653.443 15q13.2
    FAN1 31196.076 15q13.2-q13.3
    MIR211 31357.235 15q13.3
    KLF13 31619.083 15q13.3
    CHRNA7 32322.686 15q13.3
    ARHGAP11A 32907.691 15q13.3
    SCG5 32933.870 15q13-q14
    GREM1 33010.205 15q13.3
    FMN1 33057.747 15q13-q14
    RYR3 33603.177 15q14-q15
    AVEN 34158.428 15q13.1
    SLC12A6 34522.197 15q13
    MIR1233-1 34674.270 15
    ACTC1 35080.297 15q14
    MEIS2 37183.222 15q14
    SPRED1 38545.052 15q14
    RASGRP1 38780.302 15q15
    EIF2AK4 40226.347 15q13.3
    BMF 40380.092 15q14
    PAK6 40509.629 15q14
    RAD51 40987.378 15q15.1
    RMDN3 41028.086 15q15.1
    DNAJC17 41060.067 15q15.1
    PPP1R14D 41107.643 15q11.2-q14
    DLL4 41221.531 15q14
    CHAC1 41245.636 15q15.1
    INO80 41271.079 15q15.1
    CHP1 41523.437 15q13.3
    OIP5 41601.466 15q14
    NUSAP1 41624.892 15q14
    ITPKA 41786.056 15q15.1
    LTK 41795.840 15q15.1-q21.1
    MAPKBP1 42066.632 15q15.1
    VPS39 42450.899 15q14
    CAPN3 42651.698 15q15.1
    SNAP23 42787.504 15q14
    STARD9 42867.857 15q14
    TTBK2 43036.542 15q15.2
    CCNDBP1 43477.466 15q14-q15
    LCMT2 43619.974 15q15.3
    TP53BP1 43699.412 15q15-q21
    CKMT1B 43885.252 15q15
    CKMT1A 43985.084 15q15
    PDIA3 44038.590 15q15
    WDR76 44119.112 15q15.3
    FRMD5 44165.730 15q15.3
    CASC4 44580.909 15q15.1
    B2M 45003.685 15q21-q22.2
    SORD 45315.302 15q15-q21.1
    DUOX2 45384.852 15q15.3-q21
    DUOXA2 45406.523 15q21.1
    DUOXA1 45409.686 15q21.1
    DUOX1 45422.192 15q21
    C15orf48 45722.727 15q21.1
    SLC30A4 45774.680 15q21.1
    HMGN2P46 45803.334 15q15.1
    SEMA6D 47476.403 15q21.1
    DUT 48623.621 15q21.1
    FBN1 48700.503 15q21.1
    EID1 49170.290 15q21.1
    SECISBP2L 49280.835 15q21.1
    FGF7 49715.375 15q21.2
    DTWD1 49913.226 15q21.2
    HDC 50534.146 15
    USP8 50716.579 15q21.1
    TRPM7 50849.352 15q21
    TNFAIP8L3 51348.799 15q21.2
    CYP19A1 51500.254 15q21.1
    GLDN 51633.713 15q15.3
    SCG3 51973.550 15
    TMOD2 52043.758 15q21.2
    TMOD3 52121.825 15q21.1-q21.2
    BCL2L10 52401.822 15q21
    GNB5 52413.123 15q21.2
    MYO5A 52599.480 15q21
    ARPP19 52839.432 15q11.2
    ONECUT1 53049.160 15q21.3
    RAB27A 55495.164 15q15-q21.1
    PIGB 55611.133 15q21.3
    CCPG1 55647.421 15q21.1
    DYX1C1 55722.506 15q21.1
    NEDD4 56119.122 15q
    ZNF280D 56922.374 15q21.2
    ALDH1A2 58245.622 15q21.2
    AQP9 58430.408 15q
    LIPC 58724.175 15q21-q23
    SLTM 59171.244 15q21.3
    RNF111 59279.865 15q21
    CCNB2 59397.284 15q21.3
    LDHAL6B 59499.015 15q21.3
    BNIP2 59955.062 15q21.3
    FOXB1 60296.421 15q22
    ANXA2 60639.350 15q22.2
    RORA 60780.483 15q21-q22
    TLN2 62939.510 15q15-q21
    MIR190A 63116.156 15q22.2
    TPM1 63334.838 15q22.1
    RPS27L 63445.539 15q21.3
    RAB8B 63481.728 15q22
    APH1B 63569.749 15q22.2
    CA12 63615.730 15q22
    USP3 63796.710 15q22.3
    FBXL22 63889.552 15q22.31
    HERC1 63900.817 15q22
    DAPK2 64199.235 15q22.1
    SNX1 64388.083 15q22.31
    PPIB 64448.014 15q21-q22
    CSNK1G1 64457.716 15q22.1-q22.31
    PIF1 65107.833 15q22.1
    RASL12 65345.675 15q11.2-q22.33
    PDCD7 65409.717 15q22.2
    IGDCC4 65673.825 15q22.31
    DPP8 65737.998 15q22
    DENND4A 65952.957 15q22.31
    RAB11A 66161.797 15q22.31
    MAP2K1 66679.211 15q22.1-q22.33
    SMAD6 67000.930 15q21-q22
    SMAD3 67418.054 15q21-q22
    MAP2K5 67841.342 15q22.31
    SKOR1 68112.042 15q23
    PIAS1 68346.572 15q
    CALML4 68483.043 15q22.31
    FEM1B 68570.141 15q22
    ANP32A 69070.875 15q23
    NOX5 69307.034 15q22.31
    GLCE 69452.973 15q23
    PAQR5 69606.742 15q22.31
    KIF23 69706.627 15q23
    RPLP1 69745.159 15q22
    TLE3 70340.543 15q22
    UACA 70946.893 15q22-q24
    LARP6 71123.889 15q23
    CT62 71402.583 15q23
    NR2E3 72102.894 15q23
    PARP6 72533.522 15q23
    HEXA 72635.778 15q24.1
    ARIH1 72766.667 15q24
    ADPGK 73043.708 15q24.1
    NEO1 73344.825 15q22.3-q23
    CD276 73976.622 15q23-q24
    LOXL1 74218.789 15q24-q25
    STOML1 74275.559 15q24-q25
    CYP11A1 74630.103 15q23-q24
    ARID3B 74833.548 15q24
    CLK3 74907.335 15q24
    CYP1A1 75011.883 15q24.1
    CYP1A2 75041.184 15q24.1
    CSK 75074.425 15q24.1
    LMAN1L 75105.194 15q24.1
    ULK3 75128.459 15q24.1
    COX5A 75212.617 15q25
    MAN2C1 75648.133 15q11-qter
    SIN3A 75661.720 15q22.33
    PTPN9 75759.462 15q23
    IMP3 75931.426 15q24
    CSPG4 75966.663 15q24.2
    UBE2Q2 76136.385 15q24.2
    NRG4 76234.328 15q23
    RCN2 77223.962 15q22.33-q24.1
    HMG20A 77713.243 15q24
    LINGO1 77905.369 15q24
    CIB2 78396.948 15q24
    DNAJA4 78556.989 15q24.1
    CRABP1 78632.666 15q24
    IREB2 78730.518 15
    AGPHD1 78799.906 15q25.1
    CHRNA5 78857.862 15q24
    CHRNA3 78887.647 15q24
    CHRNB4 78916.636 15q24
    ADAMTS7 79051.545 15q25.1
    MORF4L1 79165.123 15q25.1
    MIR184 79502.130 15q25.1
    TMED3 79603.491 15q24-q25
    ST20 80191.182 15q25.1
    BCL2A1 80253.232 15q24.3
    ZFAND6 80351.910 15q24.3
    ARNT2 80696.692 15q25.1
    KIAA1199 81071.712 15q25.1
    MESDC2 81268.095 15q13
    MESDC1 81293.295 15q13
    IL16 81489.219 15q26.3
    MEX3B 82334.119 15q25.1
    CPEB1 83211.951 15q25.1
    SH3GL3 84116.091 15q24
    ADAMTSL3 84322.838 15q25.2
    ZNF592 85291.818 15q25.2
    SLC28A1 85427.913 15q25.3
    AKAP13 86163.181 15q24-q25
    DET1 89055.714 15q25.3
    AEN 89164.527 15q26.1
    ISG20 89182.039 15q26
    HAPLN3 89420.519 15q26.1
    MFGE8 89441.914 15q25
    FANCI 89787.194 15q26.1
    POLG 89859.536 15q24
    MIR9-3 89911.248 15q26.1
    TICRR 90118.818 15q26.1
    MESP2 90319.589 15q26.1
    ANPEP 90328.126 15q25-q26
    IDH2 90627.212 15q21-qter
    CIB1 90773.477 15q25.3-q26
    IQGAP1 90931.473 15q26.1
    CRTC3 91073.118 15q26.1
    FES 91428.276 15q25-qter
    UNC45A 91473.410 15q26.1
    PRC1 91509.268 15q26.1
    SLCO3A1 92396.938 15q26
    ST8SIA2 92937.140 15q26
    CHD2 93443.551 15q26
    RGMA 93586.636 15q26.1
    NR2F2 96869.157 15q26
    SYNM 99645.286 15q26.3
    HSP90B2P 99797.730 15q25-q26
    LOC100291666 100038.019 -
    MEF2A 100106.133 15q26
    ALDH1A3 101420.009 15q26
    CHSY1 101715.928 15q26.3
    VIMP 101812.390 15q26.3
    PCSK6 101844.133 15q26

    GeneCards  

    Contributor(s)

    WrittenJul 2004Philippe Dessen, Sakari Knuutila, Jean-Loup Huret
    UpdatedMay 2013Jean-Loup Huret, Philippe Dessen

    Citation

    This paper should be referenced as such :
    Dessen P, Knuutila S, Huret JL . Chromosome . Atlas Genet Cytogenet Oncol Haematol. Jul 2004 .
    URL : http://AtlasGeneticsOncology.org/Indexbychrom/idxa_15.html
    Dessen P, Huret JL . Chromosome . Atlas Genet Cytogenet Oncol Haematol. May 2013 .
    URL : http://AtlasGeneticsOncology.org/Indexbychrom/idxa_15.html
    © Atlas of Genetics and Cytogenetics in Oncology and Haematology
    indexed on : Wed May 15 19:19:22 CEST 2013
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