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Taking over the Atlas
Dear Colleagues,
The Atlas, once more, is in great danger, and I will have to proceed to a collective economic lay-off of all the team involved in the Atlas before the begining of April 2015 (a foundation having suddenly withdrawn its commitment to support the Atlas). I ask you herein if any Scientific Society (a Society of Cytogenetics, of Clinical Genetics, of Hematology, or a Cancer Society, or any other...), any University and/or Hospital, any Charity, or any database would be interested in taking over the Atlas, in whole or in part. If taking charge of the whole lot is too big, a consortium of various actors could be the solution (I am myself trying to find partners). Could you please spread the information, contact the relevant authorities, and find partners.
Survival of the Atlas will be critically dependant upon your ability to find solutions (and urgently!).
Kind regards.
Jean-Loup Huret
Donations are also welcome
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Familial adenomatous polyposis (FAP)


Other namesAdenomatous polyposis of the colon
Gardner syndrome
Inheritance autosomal dominant disorder; frequency is about 2.5/105 newborns; neomutation in 20%; variable expressivity; penetrance close to 100% by the age of 40 yrs.


Phenotype and clinics
  • multiple adenomatous polyps of the colon and the rectum
  • polyps also develop in the upper gastrointestinal tract
  • other: pigmented retinal lesions (congenital hypertrophy of the retinal pigment epithelium), jaw cysts, sebaceous cysts, desmoid tumours, and osteomas.
  • Neoplastic risk - colorectal cancer(s) develop from the polyps through a dysplastic stage
    - malignancies may be found in other sites: liver (hepatoblastoma), brain (medulloblastoma), thyroid.
    Prognosis colorectal cancer in early adult life (median age: 40 yrs) is the first cause of death in this disease.

    Genes involved and Proteins

    Gene NameAPC
    Location 5q21
    Description tumour suppressor gene; the APC normal gene product interacts with the adherens junction proteins a and -catenin
    Germinal FAP is caused by a highly heterogeneous spectrum of point mutations that represents a problem for molecular genetic diagnosis; but all the mutations are chain terminating and some correlations between the position of the mutation and the phenotypic consequences have been described:
    - germline mutations between codons 1250 and 1464 are associated with profuse polyposis;
    - an attenuated adenomatous polyposis coli (AAPC) is associated with mutations located very close to the 5-prime end of the APC gene;
    - the extent of congenital hypertrophy of the retinal pigment epithelium (CHRPE) depends on the position of the protein-truncating mutation in APC; CHRPE lesions are almost always absent if the mutation occur before exon 9, but are consistently present if it occurs after this exon;
    - patients with a mutation between codons 1445 and 1578 do not express CHRPE; however, these patients developed severe desmoid tumors.

    External links

    OrphanetFamilial adenomatous polyposis
    Other databaseFamilial Adenomatous Polyposis - GeneClinics


    Identification and characterization of the familial adenomatous polyposis coli gene.
    Groden J, Thliveris A, Samowitz W, Carlson M, Gelbert L, Albertsen H, Joslyn G, Stevens J, Spirio L, Robertson M
    Cell. 1991 ; 66 (3) : 589-600.
    PMID 1651174
    Mutations of chromosome 5q21 genes in FAP and colorectal cancer patients.
    Nishisho I, Nakamura Y, Miyoshi Y, Miki Y, Ando H, Horii A, Koyama K, Utsunomiya J, Baba S, Hedge P
    Science (New York, N.Y.). 1991 ; 253 (5020) : 665-669.
    PMID 1651563
    APC mutations occur early during colorectal tumorigenesis.
    Powell SM, Zilz N, Beazer-Barclay Y, Bryan TM, Hamilton SR, Thibodeau SN, Vogelstein B, Kinzler KW
    Nature. 1992 ; 359 (6392) : 235-237.
    PMID 1528264
    Lessons from hereditary colorectal cancer.
    Kinzler KW, Vogelstein B
    Cell. 1996 ; 87 (2) : 159-170.
    PMID 8861899
    Restriction of ocular fundus lesions to a specific subgroup of APC mutations in adenomatous polyposis coli patients.
    Olschwang S, Tiret A, Laurent-Puig P, Muleris M, Parc R, Thomas G
    Cell. 1993 ; 75 (5) : 959-968.
    PMID 8252631
    REVIEW articlesautomatic search in PubMed
    Last year articlesautomatic search in PubMed


    Written06-1998Sylviane Olschwang
    INSERM U434, Fondation Jean Dausset - C.E.P.H., 27, rue Juliette Dodu, 75010 Paris, France


    This paper should be referenced as such :
    Olschwang, S
    Familial adenomatous polyposis (FAP)
    Atlas Genet Cytogenet Oncol Haematol. 1998;2(4):157-158.
    Free journal version : [ pdf ]   [ DOI ]
    URL :

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    indexed on : Tue Feb 17 19:40:57 CET 2015

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