Atlas of Genetics and Cytogenetics in Oncology and Haematology


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Cancer genes partners (Gene fusions)

ABL1ACTBAFF3ALKRUNX1ATF1BCL11BBCL2BCL3BCL6
NBEAP1BCRCCDC6CCND1CCND2CLTCCOL1A1CREBBPDDIT3DUX4
ERGETV1ETV4ETV5ETV6MECOMEWSR1FGFR1FGFR3FOXO1
FOXP1FUSHMGA2HOXA9IGHIGKIGLJAK2JAZF1LPP
MALT1MAML2MBD1KMT2AMLLT10FOXO4MYBMYCKAT6ANCOA2
NPM1NR4A3NTRK1NUP214NUP98PAX3PAX5PBX1PCM1PDGFRA
PDGFRBPHF1PICALMPLAG1PMLRARARETRHOHROS1RPN1
SLC45A3SS18SSX1TAF15TAL1TCF3TRDTRBTFE3TFG
TLX3TMPRSS2TPM3TRIM24USP6ZNF384

ABL1 Partners

For further details see the paper/card concerning ABL1

Fusion genes (updated 2015)ABL1 (9q34.12) / ADAMTSL2 (9q34.2)ABL1 (9q34.12) / ANXA4 (2p13.3)ABL1 (9q34.12) / BCR (22q11.23)ABL1 (9q34.12) / CCBL1 (9q34.11)
ABL1 (9q34.12) / DDX27 (20q13.13)ABL1 (9q34.12) / ETV6 (12p13.2)ABL1 (9q34.12) / EXOSC2 (9q34.12)BCR (22q11.23) / ABL1 (9q34.12)
EML1 (14q32.2) / ABL1 (9q34.12)ETV6 (12p13.2) / ABL1 (9q34.12)FOXP1 (3p13) / ABL1 (9q34.12)INPP5D (2q37.1) / ABL1 (9q34.12)
NUP214 (9q34.13) / ABL1 (9q34.12)RANBP2 (2q12.3) / ABL1 (9q34.12)RCSD1 (1q24.2) / ABL1 (9q34.12)SFPQ (16q24.1) / ABL1 (9q34.12)
SNX2 (5q23.2) / ABL1 (9q34.12)ZMIZ1 (10q22.3) / ABL1 (9q34.12)

Interaction databases
HPRD (Human Protein Reference Database) 01809
IntAct (EBI)ABL1


ACTB Partners

For further details see the paper/card concerning ACTB

Fusion genes (updated 2015)ACO2 (22q13.2) / ACTB (7p22.1)ACTB (7p22.1) / GLI1 (12q13.3)ACTB (7p22.1) / GNAS (20q13.32)ACTB (7p22.1) / NOL4L (20q11.21)
APOL1 (22q12.3) / ACTB (7p22.1)GLI1 (12q13.3) / ACTB (7p22.1)H1F0 (22q13.1) / ACTB (7p22.1)NDUFS6 (5p15.33) / ACTB (7p22.1)
OGT (Xq13.1) / ACTB (7p22.1)SLC34A2 (4p15.2) / ACTB (7p22.1)

Interaction databases
HPRD (Human Protein Reference Database) 00032
IntAct (EBI)ACTB


AFF3 Partners

For further details see the paper/card concerning AFF3

Fusion genes (updated 2015)AFF3 (2q11.2) / ASZ1 (7q31.2)AFF3 (2q11.2) / BCL2 (18q21.33)AFF3 (2q11.2) / HDAC5 (17q21.31)AFF3 (2q11.2) / NPAS2 (2q11.2)
AFF3 (2q11.2) / TMEM182 (2q12.1)FGFR2 (10q26.13) / AFF3 (2q11.2)KMT2A (11q23.3) / AFF3 (2q11.2)RUNX1 (21q22.12) / AFF3 (2q11.2)

Interaction databases
HPRD (Human Protein Reference Database) 03272
IntAct (EBI)AFF3


ALK Partners

For further details see the paper/card concerning ALK

Fusion genes (updated 2015)A2M (12p13.31) / ALK (2p23.2)ALK (2p23.2) / MSN (Xq12)ALK (2p23.2) / PTPN3 (9q31.3)ATIC (2q35) / ALK (2p23.2)
C2orf44 (2p23.3) / ALK (2p23.2)C2orf61 (2p21) / ALK (2p23.2)CARS (11p15.4) / ALK (2p23.2)CLTC (17q23.1) / ALK (2p23.2)
CLTCL1 (22q11.21) / ALK (2p23.2)DCTN1 (2p13.1) / ALK (2p23.2)EML4 (2p21) / ALK (2p23.2)FN1 (2q35) / ALK (2p23.2)
GTF2IRD1 (7q11.23) / ALK (2p23.2)HIP1 (7q11.23) / ALK (2p23.2)KCNQ5 (6q13) / ALK (2p23.2)KIF5B (10p11.22) / ALK (2p23.2)
KLC1 (14q32.33) / ALK (2p23.2)LMNA (1q22) / ALK (2p23.2)MALAT1 (11q13.1) / ALK (2p23.2)MSN (Xq12) / ALK (2p23.2)
MYH9 (22q12.3) / ALK (2p23.2)NPM1 (5q35.1) / ALK (2p23.2)PPFIBP1 (12p11.23) / ALK (2p23.2)PRKAR1A (17q24.2) / ALK (2p23.2)
RANBP2 (2q12.3) / ALK (2p23.2)RNF213 (17q25.3) / ALK (2p23.2)SEC31A (4q21.22) / ALK (2p23.2)SQSTM1 (5q35.3) / ALK (2p23.2)
STRN (2p22.2) / ALK (2p23.2)TFG (3q12.2) / ALK (2p23.2)TPM1 (15q22.2) / ALK (2p23.2)TPM3 (1q21.3) / ALK (2p23.2)
TPM4 (19p13.12) / ALK (2p23.2)TPR (1q31.1) / ALK (2p23.2)TRAF1 (9q33.2) / ALK (2p23.2)VCL (10q22.2) / ALK (2p23.2)

Interaction databases
HPRD (Human Protein Reference Database) 00104
IntAct (EBI)ALK


RUNX1 Partners

For further details see the paper/card concerning RUNX1

Fusion genes (updated 2015)AKAP9 (7q21.2) / RUNX1 (21q22.12)DYRK1A (21q22.13) / RUNX1 (21q22.12)ETV6 (12p13.2) / RUNX1 (21q22.12)FBXO42 (1p36.13) / RUNX1 (21q22.12)
NDST2 (10q22.2) / RUNX1 (21q22.12)RCAN1 (21q22.12) / RUNX1 (21q22.12)RUNX1 (21q22.12) / - ()RUNX1 (21q22.12) / ADAMTS19 (5q23.3)
RUNX1 (21q22.12) / AFF3 (2q11.2)RUNX1 (21q22.12) / CBFA2T2 (20q11.21)RUNX1 (21q22.12) / CBFA2T3 (16q24.3)RUNX1 (21q22.12) / CEP76 (18p11.21)
RUNX1 (21q22.12) / CLCA2 (1p22.3)RUNX1 (21q22.12) / CPNE8 (12q12)RUNX1 (21q22.12) / EVX1 (7p15.2)RUNX1 (21q22.12) / KCNMA1 (10q22.3)
RUNX1 (21q22.12) / KIAA1549L (11p13)RUNX1 (21q22.12) / LPXN (11q12.1)RUNX1 (21q22.12) / MACROD1 (11q13.1)RUNX1 (21q22.12) / MECOM (3q26.2)
RUNX1 (21q22.12) / NOL4L (20q11.21)RUNX1 (21q22.12) / PRDM16 (1p36.32)RUNX1 (21q22.12) / PRDX4 (Xp22.11)RUNX1 (21q22.12) / PRRC1 (5q23.2)
RUNX1 (21q22.12) / RPL22P1 (-)RUNX1 (21q22.12) / RUNX1T1 (8q21.3)RUNX1 (21q22.12) / SH3D19 (4q31.3)RUNX1 (21q22.12) / SV2B (15q26.1)
RUNX1 (21q22.12) / TRPS1 (8q23.3)RUNX1 (21q22.12) / USP42 (7p22.1)RUNX1 (21q22.12) / YTHDF2 (1p35.3)RUNX1 (21q22.12) / ZFPM2 (8q23.1)
RUNX1 (21q22.12) / ZNF687 (1q21.3)USP16 (21q21.3) / RUNX1 (21q22.12)

Interaction databases
HPRD (Human Protein Reference Database) 01043
IntAct (EBI)RUNX1


ATF1 Partners

For further details see the paper/card concerning ATF1

Fusion genes (updated 2015)ATF1 (12q13.12) / EWSR1 (22q12.2)ATF1 (12q13.12) / GRIP1 (12q14.3)EWSR1 (22q12.2) / ATF1 (12q13.12)FUS (16p11.2) / ATF1 (12q13.12)

Interaction databases
HPRD (Human Protein Reference Database) 00440
IntAct (EBI)ATF1


BCL11B Partners

For further details see the paper/card concerning BCL11B

Fusion genes (updated 2015)BCL11B (14q32.2) / NKX2-5 (5q35.1)BCL11B (14q32.2) / TCR ()BCL11B (14q32.2) / TLX3 (5q35.1)BCL11B (14q32.2) / TRD (-)
IKZF2 (2q34) / BCL11B (14q32.2)Ig () / BCL11B (14q32.2)RNA28S5 (-) / BCL11B (14q32.2)

Interaction databases
HPRD (Human Protein Reference Database) 05950
IntAct (EBI)BCL11B


BCL2 Partners

For further details see the paper/card concerning BCL2

Fusion genes (updated 2015)AFF3 (2q11.2) / BCL2 (18q21.33)ATRX (Xq21.1) / BCL2 (18q21.33)BCL2 (18q21.33) / IGH (14q32.33)BCL2 (18q21.33) / Ig ()
IGH (14q32.33) / BCL2 (18q21.33)IGK (14q32.33) / BCL2 (18q21.33)IGL (22q11.22) / BCL2 (18q21.33)NEDD4L (18q21.31) / BCL2 (18q21.33)

Interaction databases
HPRD (Human Protein Reference Database) 01045
IntAct (EBI)BCL2


BCL3 Partners

For further details see the paper/card concerning BCL3

Interaction databases
HPRD (Human Protein Reference Database) 00179
IntAct (EBI)BCL3


BCL6 Partners

For further details see the paper/card concerning BCL6

Fusion genes (updated 2015)BCL6 (3q27.3) / C3 (19p13.3)BCL6 (3q27.3) / CIITA (16p13.13)BCL6 (3q27.3) / FBXO18 (10p15.1)BCL6 (3q27.3) / LCP1 (13q14.13)
BCL6 (3q27.3) / MBNL1 (3q25.1)BCL6 (3q27.3) / MYBL1 (8q13.1)BCL6 (3q27.3) / PIM1 (6p21.2)BCL6 (3q27.3) / POU2AF1 (11q23.1)
BCL6 (3q27.3) / RHOH (4p14)CIITA (16p13.13) / BCL6 (3q27.3)DMRT1 (9p24.3) / BCL6 (3q27.3)EIF4A2 (3q27.3) / BCL6 (3q27.3)
GAPDH (12p13.31) / BCL6 (3q27.3)GAS5 (1q25.1) / BCL6 (3q27.3)GRHPR (9p13.2) / BCL6 (3q27.3)HIST1H4I (6p22.1) / BCL6 (3q27.3)
HSP90AA1 (14q32.31) / BCL6 (3q27.3)HSP90AB1 (6p21.1) / BCL6 (3q27.3)IGH (14q32.33) / BCL6 (3q27.3)IGK (14q32.33) / BCL6 (3q27.3)
IGL (22q11.22) / BCL6 (3q27.3)IKZF1 (7p12.2) / BCL6 (3q27.3)IL21R (16p12.1) / BCL6 (3q27.3)Ig () / BCL6 (3q27.3)
LCP1 (13q14.13) / BCL6 (3q27.3)LPP (3q28) / BCL6 (3q27.3)LRMP (12p12.1) / BCL6 (3q27.3)MBNL1 (3q25.1) / BCL6 (3q27.3)
NAPA (19q13.32) / BCL6 (3q27.3)PIM1 (6p21.2) / BCL6 (3q27.3)POU2AF1 (11q23.1) / BCL6 (3q27.3)RHOH (4p14) / BCL6 (3q27.3)
SNHG5 (6q14.3) / BCL6 (3q27.3)SRSF3 (6p21.31) / BCL6 (3q27.3)ST6GAL1 (3q27.3) / BCL6 (3q27.3)TFRC (3q29) / BCL6 (3q27.3)

Interaction databases
HPRD (Human Protein Reference Database) 00180
IntAct (EBI)BCL6


NBEAP1 Partners

For further details see the paper/card concerning NBEAP1

Interaction databases
HPRD (Human Protein Reference Database) 00000
IntAct (EBI)NBEAP1


BCR Partners

For further details see the paper/card concerning BCR

Fusion genes (updated 2015)ABL1 (9q34.12) / BCR (22q11.23)BCR (22q11.23) / ABL1 (9q34.12)BCR (22q11.23) / FGFR1 (8p11.23)BCR (22q11.23) / JAK2 (9p24.1)
BCR (22q11.23) / MOV10L1 (22q13.33)BCR (22q11.23) / MRVI1 (11p15.4)BCR (22q11.23) / MTTP (4q23)BCR (22q11.23) / PDGFRA (4q12)
BCR (22q11.23) / RET (10q11.21)BCR (22q11.23) / TOM1 (22q12.3)BCR (22q11.23) / UPB1 (22q11.23)FGFR1 (8p11.23) / BCR (22q11.23)

Interaction databases
HPRD (Human Protein Reference Database) 01044
IntAct (EBI)BCR


CCDC6 Partners

For further details see the paper/card concerning CCDC6

Fusion genes (updated 2015)CCDC6 (10q21.2) / ANK3 (10q21.2)CCDC6 (10q21.2) / CTNNA3 (10q21.3)CCDC6 (10q21.2) / LIPI (21q11.2)CCDC6 (10q21.2) / PDGFRB (5q32)
CCDC6 (10q21.2) / RET (10q11.21)CCDC6 (10q21.2) / ROS1 (6q22.1)CCDC6 (10q21.2) / UBE2D1 (10q21.1)FGFR2 (10q26.13) / CCDC6 (10q21.2)
KITLG (12q21.32) / CCDC6 (10q21.2)RET (10q11.21) / CCDC6 (10q21.2)VPS13B (8q22.2) / CCDC6 (10q21.2)

Interaction databases
HPRD (Human Protein Reference Database) 09064
IntAct (EBI)CCDC6


CCND1 Partners

For further details see the paper/card concerning CCND1

Fusion genes (updated 2015)CCND1 (11q13.3) / FSTL3 (19p13.3)CCND1 (11q13.3) / IGH (14q32.33)CCND1 (11q13.3) / TACSTD2 (1p32.1)FSTL3 (19p13.3) / CCND1 (11q13.3)
IGH (14q32.33) / CCND1 (11q13.3)IGK (14q32.33) / CCND1 (11q13.3)IGL (22q11.22) / CCND1 (11q13.3)Ig () / CCND1 (11q13.3)

Interaction databases
HPRD (Human Protein Reference Database) 01346
IntAct (EBI)CCND1


CCND2 Partners

For further details see the paper/card concerning CCND2

Interaction databases
HPRD (Human Protein Reference Database) 00451
IntAct (EBI)CCND2


CLTC Partners

For further details see the paper/card concerning CLTC

Fusion genes (updated 2015)CLTC (17q23.1) / ALK (2p23.2)CLTC (17q23.1) / FAM129C (19p13.11)CLTC (17q23.1) / OTOP3 (17q25.1)CLTC (17q23.1) / PTRH2 (17q23.1)
CLTC (17q23.1) / ROS1 (6q22.1)CLTC (17q23.1) / TFE3 (Xp11.23)CLTC (17q23.1) / TFEB (6p21.1)CLTC (17q23.1) / VMP1 (17q23.1)
NF1 (17q11.2) / CLTC (17q23.1)USP32 (17q23.1) / CLTC (17q23.1)VMP1 (17q23.1) / CLTC (17q23.1)

Interaction databases
HPRD (Human Protein Reference Database) 00350
IntAct (EBI)CLTC


COL1A1 Partners

For further details see the paper/card concerning COL1A1

Fusion genes (updated 2015)COL1A1 (17q21.33) / BASP1 (5p15.1)COL1A1 (17q21.33) / COL1A2 (7q21.3)COL1A1 (17q21.33) / FGD2 (6p21.2)COL1A1 (17q21.33) / FMNL3 (12q13.12)
COL1A1 (17q21.33) / GORASP2 (2q31.1)COL1A1 (17q21.33) / PDGFB (22q13.1)COL1A1 (17q21.33) / USP6 (17p13.2)EPN1 (19q13.42) / COL1A1 (17q21.33)
HEATR5A (14q12) / COL1A1 (17q21.33)USP6 (17p13.2) / COL1A1 (17q21.33)

Interaction databases
HPRD (Human Protein Reference Database) 00362
IntAct (EBI)COL1A1


CREBBP Partners

For further details see the paper/card concerning CREBBP

Fusion genes (updated 2015)CREBBP (16p13.3) / ATG10 (5q14.1)CREBBP (16p13.3) / HCN1 (5p12)CREBBP (16p13.3) / KAT6A (8p11.21)CREBBP (16p13.3) / KMT2A (11q23.3)
CREBBP (16p13.3) / LUC7L (16p13.3)CREBBP (16p13.3) / NUBP1 (16p13.13)CREBBP (16p13.3) / RHBDF1 (16p13.3)CREBBP (16p13.3) / SLX4 (16p13.3)
CREBBP (16p13.3) / ZNF500 (16p13.3)KAT6A (8p11.21) / CREBBP (16p13.3)KAT6B (10q22.2) / CREBBP (16p13.3)KMT2A (11q23.3) / CREBBP (16p13.3)

Interaction databases
HPRD (Human Protein Reference Database) 02534
IntAct (EBI)CREBBP


DDIT3 Partners

For further details see the paper/card concerning DDIT3

Fusion genes (updated 2015)DDIT3 (12q13.3) / FUS (16p11.2)DDIT3 (12q13.3) / GLI1 (12q13.3)EWSR1 (22q12.2) / DDIT3 (12q13.3)FUS (16p11.2) / DDIT3 (12q13.3)

Interaction databases
HPRD (Human Protein Reference Database) 00529
IntAct (EBI)DDIT3


DUX4 Partners

For further details see the paper/card concerning DUX4

Interaction databases
HPRD (Human Protein Reference Database) 00000
IntAct (EBI)DUX4


ERG Partners

For further details see the paper/card concerning ERG

Fusion genes (updated 2015)- () / ERG (21q22.2)ELF4 (Xq26.1) / ERG (21q22.2)ERG (21q22.2) / GMPR (6p22.3)ERG (21q22.2) / KCNJ6 (21q22.13)
ERG (21q22.2) / ZNRF3 (22q12.1)ETS2 (21q22.2) / ERG (21q22.2)EWSR1 (22q12.2) / ERG (21q22.2)FUS (16p11.2) / ERG (21q22.2)
HERPUD1 (16q13) / ERG (21q22.2)HNRNPH1 (5q35.3) / ERG (21q22.2)NDRG1 (8q24.22) / ERG (21q22.2)PAK1 (11q13.5) / ERG (21q22.2)
SLC45A3 (1q32.1) / ERG (21q22.2)TMPRSS2 (21q22.3) / ERG (21q22.2)

Interaction databases
HPRD (Human Protein Reference Database) 01298
IntAct (EBI)ERG


ETV1 Partners

For further details see the paper/card concerning ETV1

Fusion genes (updated 2015)- () / ETV1 (7p21.2)ACSL3 (2q36.1) / ETV1 (7p21.2)BMPR1B (4q22.3) / ETV1 (7p21.2)ERVK-17 (-) / ETV1 (7p21.2)
EWSR1 (22q12.2) / ETV1 (7p21.2)FOXP1 (3p13) / ETV1 (7p21.2)FUBP1 (1p31.1) / ETV1 (7p21.2)HMGN2P46 (15q21.1) / ETV1 (7p21.2)
HNRNPA2B1 (7p15.2) / ETV1 (7p21.2)KLK2 (19q13.33) / ETV1 (7p21.2)OR51E2 (11p15.4) / ETV1 (7p21.2)SLC45A3 (1q32.1) / ETV1 (7p21.2)
TMPRSS2 (21q22.3) / ETV1 (7p21.2)

Interaction databases
HPRD (Human Protein Reference Database) 02765
IntAct (EBI)ETV1


ETV4 Partners

For further details see the paper/card concerning ETV4

Fusion genes (updated 2015)- () / ETV4 (17q21.31)CANT1 (17q25.3) / ETV4 (17q21.31)DDX5 (17q23.3) / ETV4 (17q21.31)DHX8 (17q21.31) / ETV4 (17q21.31)
ETV4 (17q21.31) / CCL16 (17q12)EWSR1 (22q12.2) / ETV4 (17q21.31)KLK2 (19q13.33) / ETV4 (17q21.31)SLC45A3 (1q32.1) / ETV4 (17q21.31)
TMPRSS2 (21q22.3) / ETV4 (17q21.31)UBTF (17q21.31) / ETV4 (17q21.31)XPO7 (8p21.3) / ETV4 (17q21.31)

Interaction databases
HPRD (Human Protein Reference Database) 02833
IntAct (EBI)ETV4


ETV5 Partners

For further details see the paper/card concerning ETV5

Interaction databases
HPRD (Human Protein Reference Database) 09035
IntAct (EBI)ETV5


ETV6 Partners

For further details see the paper/card concerning ETV6

Fusion genes (updated 2015)ADAMTS16 (5p15.32) / ETV6 (12p13.2)BCL2L14 (12p13.2) / ETV6 (12p13.2)CHIC2 (4q12) / ETV6 (12p13.2)EMP1 (12p13.1) / ETV6 (12p13.2)
ETV6 (12p13.2) / ABL1 (9q34.12)ETV6 (12p13.2) / ABL2 (1q25.2)ETV6 (12p13.2) / ACSL6 (5q31.1)ETV6 (12p13.2) / ARNT (1q21.3)
ETV6 (12p13.2) / BAZ2A (12q13.3)ETV6 (12p13.2) / CDX2 (13q12.2)ETV6 (12p13.2) / FCHO2 (5q13.2)ETV6 (12p13.2) / FGFR3 (4p16.3)
ETV6 (12p13.2) / FLT3 (13q12.2)ETV6 (12p13.2) / FRK (6q22.1)ETV6 (12p13.2) / GOT1 (10q24.2)ETV6 (12p13.2) / IGH (14q32.33)
ETV6 (12p13.2) / INO80D (2q33.3)ETV6 (12p13.2) / ITPR2 (12p12.1)ETV6 (12p13.2) / JAK2 (9p24.1)ETV6 (12p13.2) / LYN (8q12.1)
ETV6 (12p13.2) / MDS2 (1p36.11)ETV6 (12p13.2) / MECOM (3q26.2)ETV6 (12p13.2) / NCOA2 (8q13.3)ETV6 (12p13.2) / NKAIN2 (6q22.31)
ETV6 (12p13.2) / NTRK3 (15q25.3)ETV6 (12p13.2) / PDGFRA (4q12)ETV6 (12p13.2) / PDGFRB (5q32)ETV6 (12p13.2) / PER1 (17p13.1)
ETV6 (12p13.2) / PLEKHG6 (12p13.31)ETV6 (12p13.2) / PRDM16 (1p36.32)ETV6 (12p13.2) / PTPRR (12q15)ETV6 (12p13.2) / RARA (17q21.2)
ETV6 (12p13.2) / RNF217-AS1 (6q22.31)ETV6 (12p13.2) / RUNX1 (21q22.12)ETV6 (12p13.2) / SYK (9q22.2)ETV6 (12p13.2) / TTL (2q13)
ETV6 (12p13.2) / YTHDF2 (1p35.3)FLT3 (13q12.2) / ETV6 (12p13.2)IGH (14q32.33) / ETV6 (12p13.2)IGHA2 (14q32.33) / ETV6 (12p13.2)
JAK2 (9p24.1) / ETV6 (12p13.2)MN1 (22q12.1) / ETV6 (12p13.2)MNX1 (7q36.3) / ETV6 (12p13.2)NTRK3 (15q25.3) / ETV6 (12p13.2)
PAX5 (9p13.2) / ETV6 (12p13.2)

Interaction databases
HPRD (Human Protein Reference Database) 15976
IntAct (EBI)ETV6


MECOM Partners

For further details see the paper/card concerning MECOM

Fusion genes (updated 2015)ETV6 (12p13.2) / MECOM (3q26.2)LINC01565 (3q21.3) / MECOM (3q26.2)MECOM (3q26.2) / CDK6 (7q21.2)MECOM (3q26.2) / ETV6 (12p13.2)
MECOM (3q26.2) / FRMD5 (15q15.3)MECOM (3q26.2) / LMAN2L (2q11.2)MECOM (3q26.2) / RPN1 (3q21.3)NRIP1 (21q11.2) / MECOM (3q26.2)
RPN1 (3q21.3) / MECOM (3q26.2)RUNX1 (21q22.12) / MECOM (3q26.2)TRB (-) / MECOM (3q26.2)

Interaction databases
HPRD (Human Protein Reference Database) 01310
IntAct (EBI)MECOM


EWSR1 Partners

For further details see the paper/card concerning EWSR1

Fusion genes (updated 2015)ATF1 (12q13.12) / EWSR1 (22q12.2)EWSR1 (22q12.2) / ABR (17p13.3)EWSR1 (22q12.2) / ATF1 (12q13.12)EWSR1 (22q12.2) / CREB1 (2q33.3)
EWSR1 (22q12.2) / CREB3L1 (11p11.2)EWSR1 (22q12.2) / CREB3L2 (7q33)EWSR1 (22q12.2) / DDIT3 (12q13.3)EWSR1 (22q12.2) / ERG (21q22.2)
EWSR1 (22q12.2) / ETV1 (7p21.2)EWSR1 (22q12.2) / ETV4 (17q21.31)EWSR1 (22q12.2) / FEV (2q35)EWSR1 (22q12.2) / FLI1 (11q24.3)
EWSR1 (22q12.2) / KLF17 (1p34.1)EWSR1 (22q12.2) / NFATC1 (18q23)EWSR1 (22q12.2) / NFATC2 (20q13.2)EWSR1 (22q12.2) / NR4A3 (9q22.33)
EWSR1 (22q12.2) / PATZ1 (22q12.2)EWSR1 (22q12.2) / PBX1 (1q23.3)EWSR1 (22q12.2) / PBX3 (9q33.3)EWSR1 (22q12.2) / POU5F1 (6p21.33)
EWSR1 (22q12.2) / SMARCA5 (4q31.21)EWSR1 (22q12.2) / SP3 (2q31.1)EWSR1 (22q12.2) / WT1 (11p13)EWSR1 (22q12.2) / YY1 (14q32.2)
EWSR1 (22q12.2) / ZNF384 (12p13.31)EWSR1 (22q12.2) / ZNF444 (19q13.43)NFATC1 (18q23) / EWSR1 (22q12.2)NFATC2 (20q13.2) / EWSR1 (22q12.2)
NR4A3 (9q22.33) / EWSR1 (22q12.2)YY1 (14q32.2) / EWSR1 (22q12.2)

Interaction databases
HPRD (Human Protein Reference Database) 00592
IntAct (EBI)EWSR1


FGFR1 Partners

For further details see the paper/card concerning FGFR1

Fusion genes (updated 2015)BAG4 (8p11.23) / FGFR1 (8p11.23)BCR (22q11.23) / FGFR1 (8p11.23)CNTRL (9q33.2) / FGFR1 (8p11.23)CPSF6 (12q15) / FGFR1 (8p11.23)
CUX1 (7q22.1) / FGFR1 (8p11.23)ERLIN2 (8p11.23) / FGFR1 (8p11.23)ERVW-1 (-) / FGFR1 (8p11.23)FGFR1 (8p11.23) / ADAM18 (8p11.22)
FGFR1 (8p11.23) / BCR (22q11.23)FGFR1 (8p11.23) / PLAG1 (8q12.1)FGFR1 (8p11.23) / SLC20A2 (8p11.21)FGFR1 (8p11.23) / TACC1 (8p11.22)
FGFR1 (8p11.23) / ZNF703 (8p11.23)FGFR1OP (6q27) / FGFR1 (8p11.23)FGFR1OP2 (12p11.23) / FGFR1 (8p11.23)FN1 (2q35) / FGFR1 (8p11.23)
LRRFIP1 (2q37.3) / FGFR1 (8p11.23)MYO18A (17q11.2) / FGFR1 (8p11.23)RHOT1 (17q11.2) / FGFR1 (8p11.23)TPR (1q31.1) / FGFR1 (8p11.23)
TRIM24 (7q33) / FGFR1 (8p11.23)WHSC1L1 (8p11.23) / FGFR1 (8p11.23)ZMYM2 (13q12.11) / FGFR1 (8p11.23)

Interaction databases
HPRD (Human Protein Reference Database) 00634
IntAct (EBI)FGFR1


FGFR3 Partners

For further details see the paper/card concerning FGFR3

Fusion genes (updated 2015)ETV6 (12p13.2) / FGFR3 (4p16.3)FGFR3 (4p16.3) / AES (19p13.3)FGFR3 (4p16.3) / BAIAP2L1 (7q21.3)FGFR3 (4p16.3) / ELAVL3 (19p13.2)
FGFR3 (4p16.3) / ETV6 (12p13.2)FGFR3 (4p16.3) / TACC3 (4p16.3)FGFR3 (4p16.3) / TPRG1 (3q28)IGH (14q32.33) / FGFR3 (4p16.3)
IGL (22q11.22) / FGFR3 (4p16.3)

Interaction databases
HPRD (Human Protein Reference Database) 00624
IntAct (EBI)FGFR3


FOXO1 Partners

For further details see the paper/card concerning FOXO1

Fusion genes (updated 2015)FOXO1 (13q14.11) / ELF1 (13q14.11)FOXO1 (13q14.11) / PAX3 (2q36.1)PAX3 (2q36.1) / FOXO1 (13q14.11)PAX7 (1p36.13) / FOXO1 (13q14.11)

Interaction databases
HPRD (Human Protein Reference Database) 00645
IntAct (EBI)FOXO1


FOXP1 Partners

For further details see the paper/card concerning FOXP1

Fusion genes (updated 2015)AQP2 (12q13.12) / FOXP1 (3p13)CACNA2D3 (3p21.1) / FOXP1 (3p13)COL6A2 (21q22.3) / FOXP1 (3p13)FOXP1 (3p13) / ABL1 (9q34.12)
FOXP1 (3p13) / ACTR3B (7q36.1)FOXP1 (3p13) / ARMC8 (3q22.3)FOXP1 (3p13) / BIRC3 (11q22.2)FOXP1 (3p13) / C5orf51 (5p13.1)
FOXP1 (3p13) / COQ10B (2q33.1)FOXP1 (3p13) / EIF4E3 (3p13)FOXP1 (3p13) / ETV1 (7p21.2)FOXP1 (3p13) / IGH (14q32.33)
FOXP1 (3p13) / IGHA2 (14q32.33)FOXP1 (3p13) / PXDNL (8q11.22)FOXP1 (3p13) / RGAG4 (Xq13.1)FOXP1 (3p13) / RUFY1 (5q35.3)
FOXP1 (3p13) / UGGT1 (2q14.3)HLA-C (6p21.33) / FOXP1 (3p13)IGH (14q32.33) / FOXP1 (3p13)Ig () / FOXP1 (3p13)
NDRG1 (8q24.22) / FOXP1 (3p13)PAX5 (9p13.2) / FOXP1 (3p13)PLVAP (19p13.11) / FOXP1 (3p13)PRKAR1A (17q24.2) / FOXP1 (3p13)
PSMA5 (1p13.3) / FOXP1 (3p13)SHC1 (1q21.3) / FOXP1 (3p13)TGOLN2 (2p11.2) / FOXP1 (3p13)UGGT1 (2q14.3) / FOXP1 (3p13)
VGLL4 (3p25.3) / FOXP1 (3p13)

Interaction databases
HPRD (Human Protein Reference Database) 18518
IntAct (EBI)FOXP1


FUS Partners

For further details see the paper/card concerning FUS

Fusion genes (updated 2015)CREB3L2 (7q33) / FUS (16p11.2)DDIT3 (12q13.3) / FUS (16p11.2)FUS (16p11.2) / ATF1 (12q13.12)FUS (16p11.2) / CHD1 (5q15)
FUS (16p11.2) / CREB3L1 (11p11.2)FUS (16p11.2) / CREB3L2 (7q33)FUS (16p11.2) / DDIT3 (12q13.3)FUS (16p11.2) / ERG (21q22.2)
FUS (16p11.2) / FEV (2q35)FUS (16p11.2) / KLF17 (1p34.1)FUS (16p11.2) / NFATC2 (20q13.2)FUS (16p11.2) / NR4A3 (9q22.33)
FUS (16p11.2) / PRSS36 (16p11.2)FUS (16p11.2) / SET (9q34.11)

Interaction databases
HPRD (Human Protein Reference Database) 00660
IntAct (EBI)FUS


HMGA2 Partners

For further details see the paper/card concerning HMGA2

Fusion genes (updated 2015)FHIT (3p14.2) / HMGA2 (12q14.3)HMGA2 (12q14.3) / ACKR3 (2q37.3)HMGA2 (12q14.3) / ALDH2 (12q24.12)HMGA2 (12q14.3) / CCNB1IP1 (14q11.2)
HMGA2 (12q14.3) / COG5 (7q22.3)HMGA2 (12q14.3) / COX6C (8q22.2)HMGA2 (12q14.3) / EBF1 (5q33.3)HMGA2 (12q14.3) / EFCAB6 (22q13.2)
HMGA2 (12q14.3) / FHIT (3p14.2)HMGA2 (12q14.3) / HMGA2 (12q14.3)HMGA2 (12q14.3) / LHFP (13q13.3)HMGA2 (12q14.3) / LPP (3q28)
HMGA2 (12q14.3) / NFIB (9p23)HMGA2 (12q14.3) / NUP107 (12q15)HMGA2 (12q14.3) / PPAP2B (1p32.2)HMGA2 (12q14.3) / RAD51B (14q24.1)
HMGA2 (12q14.3) / WIF1 (12q14.3)LPP (3q28) / HMGA2 (12q14.3)RAD51B (14q24.1) / HMGA2 (12q14.3)

Interaction databases
HPRD (Human Protein Reference Database) 02827
IntAct (EBI)HMGA2


HOXA9 Partners

For further details see the paper/card concerning HOXA9

Fusion genes (updated 2015)GATA2 (3q21.3) / HOXA9 (7p15.2)MSI2 (17q22) / HOXA9 (7p15.2)NUP98 (11p15.4) / HOXA9 (7p15.2)

Interaction databases
HPRD (Human Protein Reference Database) 00844
IntAct (EBI)HOXA9


IGH Partners

For further details see the paper/card concerning IGH

Fusion genes (updated 2015)IGH (14q32.33) / BACH2 (6q15)IGH (14q32.33) / BANK1 (4q24)IGH (14q32.33) / BCL10 (1p22.3)IGH (14q32.33) / BCL11A (2p16.1)
IGH (14q32.33) / BCL2 (18q21.33)IGH (14q32.33) / BCL3 (19q13.32)IGH (14q32.33) / BCL6 (3q27.3)IGH (14q32.33) / BCL9 (1q21.2)
IGH (14q32.33) / BMI1 (10p12.2)IGH (14q32.33) / CBFA2T3 (16q24.3)IGH (14q32.33) / CCND1 (11q13.3)IGH (14q32.33) / CCND2 (12p13.32)
IGH (14q32.33) / CCND3 (6p21.1)IGH (14q32.33) / CCNE1 (19q12)IGH (14q32.33) / CD44 (11p13)IGH (14q32.33) / CDK6 (7q21.2)
IGH (14q32.33) / CEBPA (19q13.11)IGH (14q32.33) / CEBPB (20q13.13)IGH (14q32.33) / CEBPD (8q11.21)IGH (14q32.33) / CEBPE (14q11.2)
IGH (14q32.33) / CEBPG (19q13.11)IGH (14q32.33) / CHST11 (12q23.3)IGH (14q32.33) / CNN3 (1p21.3)IGH (14q32.33) / CRLF2 (Xp22.33)
IGH (14q32.33) / DDX6 (11q23.3)IGH (14q32.33) / EBF1 (5q33.3)IGH (14q32.33) / EGFR (7p11.2)IGH (14q32.33) / EPOR (19p13.2)
IGH (14q32.33) / ERVW-1 (-)IGH (14q32.33) / ETV6 (12p13.2)IGH (14q32.33) / FCGR2B (1q23.3)IGH (14q32.33) / FCRL4 (1q23.1)
IGH (14q32.33) / FGFR3 (4p16.3)IGH (14q32.33) / FOXP1 (3p13)IGH (14q32.33) / GPR34 (Xp11.4)IGH (14q32.33) / ID4 (6p22.3)
IGH (14q32.33) / IGF2BP1 (17q21.32)IGH (14q32.33) / IGL (22q11.22)IGH (14q32.33) / IL3 (5q31.1)IGH (14q32.33) / IRF4 (6p25.3)
IGH (14q32.33) / IRF8 (16q24.1)IGH (14q32.33) / KDM4C (9p24.1)IGH (14q32.33) / LHX2 (9q33.3)IGH (14q32.33) / LHX4 (1q25.2)
IGH (14q32.33) / MAF (16q23.2)IGH (14q32.33) / MAFB (20q12)IGH (14q32.33) / MALT1 (18q21.32)IGH (14q32.33) / MIR125B1 (11q24.1)
IGH (14q32.33) / MUC1 (1q22)IGH (14q32.33) / MYC (8q24.21)IGH (14q32.33) / MYCN (2p24.3)IGH (14q32.33) / NFKB2 (10q24.32)
IGH (14q32.33) / PAFAH1B2 (11q23.3)IGH (14q32.33) / PAX5 (9p13.2)IGH (14q32.33) / PCSK7 (11q23.3)IGH (14q32.33) / RHOH (4p14)
IGH (14q32.33) / SPIB (19q13.33)IGH (14q32.33) / TENM2 (5q34)IGH (14q32.33) / TERT (5p15.33)IGH (14q32.33) / TNFSF13 (17p13.1)
IGH (14q32.33) / TRA (-)IGH (14q32.33) / TRD (-)IGH (14q32.33) / WHSC1 (4p16.3)TRG (-) / IGH (14q32.33)

Interaction databases
HPRD (Human Protein Reference Database) 00000
IntAct (EBI)IGH


IGK Partners

For further details see the paper/card concerning IGK

Fusion genes (updated 2015)IGK (14q32.33) / BCL10 (1p22.3)IGK (14q32.33) / BCL2 (18q21.33)IGK (14q32.33) / BCL3 (19q13.32)IGK (14q32.33) / BCL6 (3q27.3)
IGK (14q32.33) / CCND1 (11q13.3)IGK (14q32.33) / CCND2 (12p13.32)IGK (14q32.33) / CDK6 (7q21.2)IGK (14q32.33) / KDSR (18q21.33)
IGK (14q32.33) / MYC (8q24.21)IGK (14q32.33) / PVT1 (8q24.21)IGK (14q32.33) / TPD52 (8q21.13)IGK (14q32.33) / ZC3H12D (6q25.1)

Interaction databases
HPRD (Human Protein Reference Database) 00000
IntAct (EBI)IGK


IGL Partners

For further details see the paper/card concerning IGL

Fusion genes (updated 2015)IGH (14q32.33) / IGL (22q11.22)IGL (22q11.22) / BCL2 (18q21.33)IGL (22q11.22) / BCL3 (19q13.32)IGL (22q11.22) / BCL6 (3q27.3)
IGL (22q11.22) / BCL9 (1q21.2)IGL (22q11.22) / CCND1 (11q13.3)IGL (22q11.22) / CCND2 (12p13.32)IGL (22q11.22) / CCND3 (6p21.1)
IGL (22q11.22) / CDK6 (7q21.2)IGL (22q11.22) / FGFR3 (4p16.3)IGL (22q11.22) / IRF4 (6p25.3)IGL (22q11.22) / MAF (16q23.2)
IGL (22q11.22) / MYC (8q24.21)IGL (22q11.22) / PRDM16 (1p36.32)IGL (22q11.22) / PVT1 (8q24.21)IGL (22q11.22) / REL (2p16.1)

Interaction databases
HPRD (Human Protein Reference Database) 00000
IntAct (EBI)IGL


JAK2 Partners

For further details see the paper/card concerning JAK2

Fusion genes (updated 2015)BCR (22q11.23) / JAK2 (9p24.1)CDK12 (17q12) / JAK2 (9p24.1)DOCK8 (9p24.3) / JAK2 (9p24.1)ETV6 (12p13.2) / JAK2 (9p24.1)
JAK2 (9p24.1) / CSTF3 (11p13)JAK2 (9p24.1) / ETV6 (12p13.2)JAK2 (9p24.1) / GLDC (9p24.1)JAK2 (9p24.1) / PAX5 (9p13.2)
JAK2 (9p24.1) / PCM1 (8p22)JAK2 (9p24.1) / TPM3 (1q21.3)KDM4C (9p24.1) / JAK2 (9p24.1)PAX5 (9p13.2) / JAK2 (9p24.1)
PCM1 (8p22) / JAK2 (9p24.1)RIC1 (9p24.1) / JAK2 (9p24.1)SEC31A (4q21.22) / JAK2 (9p24.1)SIK2 (11q23.1) / JAK2 (9p24.1)
SPAG9 (17q21.33) / JAK2 (9p24.1)SSBP2 (5q14.1) / JAK2 (9p24.1)STRN3 (14q12) / JAK2 (9p24.1)TPM3 (1q21.3) / JAK2 (9p24.1)
TTC13 (1q42.2) / JAK2 (9p24.1)

Interaction databases
HPRD (Human Protein Reference Database) 00993
IntAct (EBI)JAK2


JAZF1 Partners

For further details see the paper/card concerning JAZF1

Fusion genes (updated 2015)JAZF1 (7p15.2) / CPT1C (19q13.33)JAZF1 (7p15.2) / PHF1 (6p21.32)JAZF1 (7p15.2) / SNX13 (7p21.1)JAZF1 (7p15.2) / SUZ12 (17q11.2)
MSRB3 (12q14.3) / JAZF1 (7p15.2)RNF216 (7p22.1) / JAZF1 (7p15.2)TAX1BP1 (7p15.2) / JAZF1 (7p15.2)

Interaction databases
HPRD (Human Protein Reference Database) 09373
IntAct (EBI)JAZF1


LPP Partners

For further details see the paper/card concerning LPP

Fusion genes (updated 2015)FAM19A3 (1p13.2) / LPP (3q28)HMGA2 (12q14.3) / LPP (3q28)KMT2A (11q23.3) / LPP (3q28)LPP (3q28) / ABHD17C (15q25.1)
LPP (3q28) / BCL6 (3q27.3)LPP (3q28) / CASR (3q21.1)LPP (3q28) / CLSTN2 (3q23)LPP (3q28) / F2 (11p11.2)
LPP (3q28) / FAM108C1 ()LPP (3q28) / GOLIM4 (3q26.2)LPP (3q28) / HMGA2 (12q14.3)LPP (3q28) / KMT2A (11q23.3)
LPP (3q28) / LEPREL1 ()LPP (3q28) / SPATA16 (3q26.31)LPP (3q28) / ST6GAL1 (3q27.3)LPP (3q28) / TP63 (3q28)
SEPT9 (17q25.2) / LPP (3q28)TC2N (14q32.12) / LPP (3q28)

Interaction databases
HPRD (Human Protein Reference Database) 02828
IntAct (EBI)LPP


MALT1 Partners

For further details see the paper/card concerning MALT1

Fusion genes (updated 2015)BIRC3 (11q22.2) / MALT1 (18q21.32)IGH (14q32.33) / MALT1 (18q21.32)MALT1 (18q21.32) / MAP4 (3p21.31)

Interaction databases
HPRD (Human Protein Reference Database) 06892
IntAct (EBI)MALT1


MAML2 Partners

For further details see the paper/card concerning MAML2

Fusion genes (updated 2015)C11orf95 (11q13.1) / MAML2 (11q21)CRTC1 (19p13.11) / MAML2 (11q21)CRTC3 (15q26.1) / MAML2 (11q21)CXCR4 (2q22.1) / MAML2 (11q21)
KMT2A (11q23.3) / MAML2 (11q21)MAML2 (11q21) / CNTN5 (11q22.1)MAML2 (11q21) / CRTC1 (19p13.11)MYB (6q23.3) / MAML2 (11q21)
YAP1 (11q22.1) / MAML2 (11q21)

Interaction databases
HPRD (Human Protein Reference Database) 09608
IntAct (EBI)MAML2


MBD1 Partners

For further details see the paper/card concerning MBD1

Interaction databases
HPRD (Human Protein Reference Database) 01133
IntAct (EBI)MBD1


KMT2A Partners

For further details see the paper/card concerning KMT2A

Fusion genes (updated 2015)ABI1 (10p12.1) / KMT2A (11q23.3)ACTN4 (19q13.2) / KMT2A (11q23.3)AFF1 (4q21.3) / KMT2A (11q23.3)ARHGAP18 (6q22.33) / KMT2A (11q23.3)
BTBD18 (11q12.1) / KMT2A (11q23.3)CDK6 (7q21.2) / KMT2A (11q23.3)CREBBP (16p13.3) / KMT2A (11q23.3)DAB2IP (9q33.2) / KMT2A (11q23.3)
EPS15 (1p32.3) / KMT2A (11q23.3)FRYL (4p11) / KMT2A (11q23.3)GAS7 (17p13.1) / KMT2A (11q23.3)KMT2A (11q23.3) / ABI1 (10p12.1)
KMT2A (11q23.3) / ABI2 (2q33.2)KMT2A (11q23.3) / ACACA (17q12)KMT2A (11q23.3) / ACTN4 (19q13.2)KMT2A (11q23.3) / AFF1 (4q21.3)
KMT2A (11q23.3) / AFF3 (2q11.2)KMT2A (11q23.3) / AFF4 (5q31.1)KMT2A (11q23.3) / ARHGAP26 (5q31.3)KMT2A (11q23.3) / ARHGEF12 (11q23.3)
KMT2A (11q23.3) / ATAD2 (8q24.13)KMT2A (11q23.3) / BTBD18 (11q12.1)KMT2A (11q23.3) / CASC5 (15q15.1)KMT2A (11q23.3) / CASP8AP2 (6q15)
KMT2A (11q23.3) / CBL (11q23.3)KMT2A (11q23.3) / CEP170B (14q32.33)KMT2A (11q23.3) / CREBBP (16p13.3)KMT2A (11q23.3) / CT45A2 (Xq26.3)
KMT2A (11q23.3) / DAB2IP (9q33.2)KMT2A (11q23.3) / EEFSEC (3q21.3)KMT2A (11q23.3) / ELL (19p13.11)KMT2A (11q23.3) / EP300 (22q13.2)
KMT2A (11q23.3) / EPS15 (1p32.3)KMT2A (11q23.3) / FLNA (Xq28)KMT2A (11q23.3) / FOXO3 (6q21)KMT2A (11q23.3) / FOXO4 (Xq13.1)
KMT2A (11q23.3) / FRYL (4p11)KMT2A (11q23.3) / GAS7 (17p13.1)KMT2A (11q23.3) / GMPS (3q25.31)KMT2A (11q23.3) / GPHN (14q23.3)
KMT2A (11q23.3) / KIAA0284 ()KMT2A (11q23.3) / KIAA1524 (3q13.13)KMT2A (11q23.3) / LASP1 (17q12)KMT2A (11q23.3) / LPP (3q28)
KMT2A (11q23.3) / MAML2 (11q21)KMT2A (11q23.3) / MAPRE1 (20q11.21)KMT2A (11q23.3) / MLLT1 (19p13.3)KMT2A (11q23.3) / MLLT10 (10p12.31)
KMT2A (11q23.3) / MLLT11 (1q21.3)KMT2A (11q23.3) / MLLT3 (9p21.3)KMT2A (11q23.3) / MLLT4 (6q27)KMT2A (11q23.3) / MLLT6 (17q12)
KMT2A (11q23.3) / MYO1F (19p13.2)KMT2A (11q23.3) / NCKIPSD (3p21.31)KMT2A (11q23.3) / NEBL (10p12.31)KMT2A (11q23.3) / NKAIN3 (8q12.3)
KMT2A (11q23.3) / NRIP3 (11p15.4)KMT2A (11q23.3) / PDS5A (4p14)KMT2A (11q23.3) / PICALM (11q14.2)KMT2A (11q23.3) / PRRC1 (5q23.2)
KMT2A (11q23.3) / ROS1 (6q22.1)KMT2A (11q23.3) / SACM1L (3p21.31)KMT2A (11q23.3) / SARNP (12q13.2)KMT2A (11q23.3) / SEPT11 (4q21.1)
KMT2A (11q23.3) / SEPT2 (2q37.3)KMT2A (11q23.3) / SEPT5 (22q11.21)KMT2A (11q23.3) / SEPT6 (Xq24)KMT2A (11q23.3) / SEPT9 (17q25.2)
KMT2A (11q23.3) / SH3GL1 (19p13.3)KMT2A (11q23.3) / SORBS2 (4q35.1)KMT2A (11q23.3) / SYTL3 (6q25.3)KMT2A (11q23.3) / TET1 (10q21.3)
KMT2A (11q23.3) / TOP3A (17p11.2)KMT2A (11q23.3) / ZFYVE19 (15q15.1)LASP1 (17q12) / KMT2A (11q23.3)LPP (3q28) / KMT2A (11q23.3)
MAPRE1 (20q11.21) / KMT2A (11q23.3)MLLT1 (19p13.3) / KMT2A (11q23.3)MLLT3 (9p21.3) / KMT2A (11q23.3)NUP98 (11p15.4) / KMT2A (11q23.3)
TET1 (10q21.3) / KMT2A (11q23.3)TOP3A (17p11.2) / KMT2A (11q23.3)

Interaction databases
HPRD (Human Protein Reference Database) 01162
IntAct (EBI)KMT2A


MLLT10 Partners

For further details see the paper/card concerning MLLT10

Fusion genes (updated 2015)DDX3X (Xp11.4) / MLLT10 (10p12.31)HNRNPH1 (5q35.3) / MLLT10 (10p12.31)KMT2A (11q23.3) / MLLT10 (10p12.31)MLLT10 (10p12.31) / CEP164 (11q23.3)
MLLT10 (10p12.31) / CLP1 (11q12.1)MLLT10 (10p12.31) / DDX3X (Xp11.4)MLLT10 (10p12.31) / KCNJ6 (21q22.13)MLLT10 (10p12.31) / PICALM (11q14.2)
MLLT10 (10p12.31) / PPP2R1B (11q23.1)MLLT10 (10p12.31) / RNF169 (11q13.4)MLLT10 (10p12.31) / SNAP91 (6q14.2)MLLT10 (10p12.31) / SNTG1 (8q11.21)
NAP1L1 (12q21.2) / MLLT10 (10p12.31)PICALM (11q14.2) / MLLT10 (10p12.31)XPO1 (2p15) / MLLT10 (10p12.31)

Interaction databases
HPRD (Human Protein Reference Database) 03874
IntAct (EBI)MLLT10


FOXO4 Partners

For further details see the paper/card concerning FOXO4

Fusion genes (updated 2015)CIC (19q13.2) / FOXO4 (Xq13.1)KMT2A (11q23.3) / FOXO4 (Xq13.1)PAX3 (2q36.1) / FOXO4 (Xq13.1)

Interaction databases
HPRD (Human Protein Reference Database) 02070
IntAct (EBI)FOXO4


MYB Partners

For further details see the paper/card concerning MYB

Fusion genes (updated 2015)AHI1 (6q23.3) / MYB (6q23.3)AIM1 (6q21) / MYB (6q23.3)HEATR5B (2p22.2) / MYB (6q23.3)MAN1A1 (6q22.31) / MYB (6q23.3)
MYB (6q23.3) / AHI1 (6q23.3)MYB (6q23.3) / GATA1 (Xp11.23)MYB (6q23.3) / MAML2 (11q21)MYB (6q23.3) / MNX1 (7q36.3)
MYB (6q23.3) / NFIB (9p23)MYB (6q23.3) / PCDHGA1 (5q31.3)MYB (6q23.3) / PDCD1LG2 (9p24.1)NFIB (9p23) / MYB (6q23.3)
TRB (-) / MYB (6q23.3)

Interaction databases
HPRD (Human Protein Reference Database) 01810
IntAct (EBI)MYB


MYC Partners

For further details see the paper/card concerning MYC

Fusion genes (updated 2015)BCL3 (19q13.32) / MYC (8q24.21)BTG1 (12q21.33) / MYC (8q24.21)CSMD3 (8q23.3) / MYC (8q24.21)HMGN2P46 (15q21.1) / MYC (8q24.21)
IGH (14q32.33) / MYC (8q24.21)IGK (14q32.33) / MYC (8q24.21)IGL (22q11.22) / MYC (8q24.21)Ig () / MYC (8q24.21)
LRMP (12p12.1) / MYC (8q24.21)MIR142 (17q22) / MYC (8q24.21)MYC (8q24.21) / ARHGEF17 (11q13.4)MYC (8q24.21) / BCL7A (12q24.31)
MYC (8q24.21) / IGH (14q32.33)MYC (8q24.21) / Ig ()MYC (8q24.21) / ZBTB5 (9p13.2)MYC (8q24.21) / ZCCHC7 (9p13.2)
PVT1 (8q24.21) / MYC (8q24.21)RNF213 (17q25.3) / MYC (8q24.21)TRA (-) / MYC (8q24.21)

Interaction databases
HPRD (Human Protein Reference Database) 01818
IntAct (EBI)MYC


KAT6A Partners

For further details see the paper/card concerning KAT6A

Fusion genes (updated 2015)CREBBP (16p13.3) / KAT6A (8p11.21)FAM49B (8q24.21) / KAT6A (8p11.21)KAT6A (8p11.21) / ADAM2 (8p11.22)KAT6A (8p11.21) / ASXL2 (2p23.3)
KAT6A (8p11.21) / CREBBP (16p13.3)KAT6A (8p11.21) / EP300 (22q13.2)KAT6A (8p11.21) / GOT1L1 (8p11.23)KAT6A (8p11.21) / IKBKB (8p11.21)
KAT6A (8p11.21) / KLK4 (19q13.41)KAT6A (8p11.21) / LEUTX (19q13.2)KAT6A (8p11.21) / MSR1 (8p22)KAT6A (8p11.21) / NCOA2 (8q13.3)
KAT6A (8p11.21) / NCOA3 (20q13.12)KAT6A (8p11.21) / RAB11FIP1 (8p11.23)

Interaction databases
HPRD (Human Protein Reference Database) 03244
IntAct (EBI)KAT6A


NCOA2 Partners

For further details see the paper/card concerning NCOA2

Interaction databases
HPRD (Human Protein Reference Database) 09066
IntAct (EBI)NCOA2


NPM1 Partners

For further details see the paper/card concerning NPM1

Fusion genes (updated 2015)BSPRY (9q32) / NPM1 (5q35.1)NPM1 (5q35.1) / ALK (2p23.2)NPM1 (5q35.1) / MLF1 (3q25.32)NPM1 (5q35.1) / RAB4A (1q42.13)
NPM1 (5q35.1) / RARA (17q21.2)NPM1 (5q35.1) / TYK2 (19p13.2)

Interaction databases
HPRD (Human Protein Reference Database) 01246
IntAct (EBI)NPM1


NR4A3 Partners

For further details see the paper/card concerning NR4A3

Fusion genes (updated 2015)EWSR1 (22q12.2) / NR4A3 (9q22.33)FUS (16p11.2) / NR4A3 (9q22.33)NR4A3 (9q22.33) / EWSR1 (22q12.2)NR4A3 (9q22.33) / TAF15 (17q12)
TAF15 (17q12) / NR4A3 (9q22.33)TCF12 (15q21.3) / NR4A3 (9q22.33)TFG (3q12.2) / NR4A3 (9q22.33)

Interaction databases
HPRD (Human Protein Reference Database) 02766
IntAct (EBI)NR4A3


NTRK1 Partners

For further details see the paper/card concerning NTRK1

Interaction databases
HPRD (Human Protein Reference Database) 01869
IntAct (EBI)NTRK1


NUP214 Partners

For further details see the paper/card concerning NUP214

Fusion genes (updated 2015)DEK (6p22.3) / NUP214 (9q34.13)GPSM1 (9q34.3) / NUP214 (9q34.13)NOTCH1 (9q34.3) / NUP214 (9q34.13)NUP214 (9q34.13) / ABL1 (9q34.12)
NUP214 (9q34.13) / AIF1L (9q34.12)NUP214 (9q34.13) / DEK (6p22.3)NUP214 (9q34.13) / XKR3 (22q11.1)POMT1 (9q34.13) / NUP214 (9q34.13)
PRRC2B (9q34.13) / NUP214 (9q34.13)SET (9q34.11) / NUP214 (9q34.13)SQSTM1 (5q35.3) / NUP214 (9q34.13)

Interaction databases
HPRD (Human Protein Reference Database) 00258
IntAct (EBI)NUP214


NUP98 Partners

For further details see the paper/card concerning NUP98

Fusion genes (updated 2015)ANKRD28 (3p25.1) / NUP98 (11p15.4)C11orf49 (11p11.2) / NUP98 (11p15.4)NSD1 (5q35.2) / NUP98 (11p15.4)NUP98 (11p15.4) / ADD3 (10q25.1)
NUP98 (11p15.4) / CCDC28A (6q24.1)NUP98 (11p15.4) / DDX10 (11q22.3)NUP98 (11p15.4) / HHEX (10q23.33)NUP98 (11p15.4) / HMGB3 (Xq28)
NUP98 (11p15.4) / HOXA11 (7p15.2)NUP98 (11p15.4) / HOXA13 (7p15.2)NUP98 (11p15.4) / HOXA9 (7p15.2)NUP98 (11p15.4) / HOXC11 (12q13.13)
NUP98 (11p15.4) / HOXC13 (12q13.13)NUP98 (11p15.4) / HOXD11 (2q31.1)NUP98 (11p15.4) / HOXD13 (2q31.1)NUP98 (11p15.4) / IQCG (3q29)
NUP98 (11p15.4) / KDM5A (12p13.33)NUP98 (11p15.4) / KMT2A (11q23.3)NUP98 (11p15.4) / LNP1 (3q12.2)NUP98 (11p15.4) / NSD1 (5q35.2)
NUP98 (11p15.4) / PHF23 (17p13.1)NUP98 (11p15.4) / POU1F1 (3p11.2)NUP98 (11p15.4) / PRRX1 (1q24.2)NUP98 (11p15.4) / PRRX2 (9q34.11)
NUP98 (11p15.4) / PSIP1 (9p22.3)NUP98 (11p15.4) / RAP1GDS1 (4q23)NUP98 (11p15.4) / RARG (12q13.13)NUP98 (11p15.4) / RHOG (11p15.4)
NUP98 (11p15.4) / SETBP1 (18q12.3)NUP98 (11p15.4) / TMEM117 (12q12)NUP98 (11p15.4) / TOP1 (20q12)NUP98 (11p15.4) / TOP2B (3p24.2)
NUP98 (11p15.4) / WHSC1L1 (8p11.23)PSIP1 (9p22.3) / NUP98 (11p15.4)STIM1 (11p15.4) / NUP98 (11p15.4)

Interaction databases
HPRD (Human Protein Reference Database) 03012
IntAct (EBI)NUP98


PAX3 Partners

For further details see the paper/card concerning PAX3

Fusion genes (updated 2015)FOXO1 (13q14.11) / PAX3 (2q36.1)PAX3 (2q36.1) / FOXO1 (13q14.11)PAX3 (2q36.1) / FOXO4 (Xq13.1)PAX3 (2q36.1) / MAML3 (4q31.1)
PAX3 (2q36.1) / NCOA1 (2p23.3)PAX3 (2q36.1) / NCOA2 (8q13.3)

Interaction databases
HPRD (Human Protein Reference Database) 09421
IntAct (EBI)PAX3


PAX5 Partners

For further details see the paper/card concerning PAX5

Fusion genes (updated 2015)IGH (14q32.33) / PAX5 (9p13.2)JAK2 (9p24.1) / PAX5 (9p13.2)PAX5 (9p13.2) / ASXL1 (20q11.21)PAX5 (9p13.2) / AUTS2 (7q11.22)
PAX5 (9p13.2) / BRD1 (22q13.33)PAX5 (9p13.2) / C20orf112 ()PAX5 (9p13.2) / DACH1 (13q21.33)PAX5 (9p13.2) / DACH2 (Xq21.2)
PAX5 (9p13.2) / ELN (7q11.23)PAX5 (9p13.2) / ETV6 (12p13.2)PAX5 (9p13.2) / FOXP1 (3p13)PAX5 (9p13.2) / GOLGA6A (15q24.1)
PAX5 (9p13.2) / HIPK1 (1p13.2)PAX5 (9p13.2) / IGH (14q32.33)PAX5 (9p13.2) / JAK2 (9p24.1)PAX5 (9p13.2) / KIF3B (20q11.21)
PAX5 (9p13.2) / LOC392027 (-)PAX5 (9p13.2) / NOL4L (20q11.21)PAX5 (9p13.2) / PML (15q24.1)PAX5 (9p13.2) / POM121 (7q11.23)
PAX5 (9p13.2) / SLCO1B3 (12p12.2)PAX5 (9p13.2) / TAOK1 (17q11.2)PAX5 (9p13.2) / TMEM9B (11p15.4)PAX5 (9p13.2) / ZNF521 (18q11.2)

Interaction databases
HPRD (Human Protein Reference Database) 01334
IntAct (EBI)PAX5


PBX1 Partners

For further details see the paper/card concerning PBX1

Fusion genes (updated 2015)AFF1 (4q21.3) / PBX1 (1q23.3)EWSR1 (22q12.2) / PBX1 (1q23.3)PBX1 (1q23.3) / COPG2 (7q32.2)PBX1 (1q23.3) / CTNNA3 (10q21.3)
PBX1 (1q23.3) / DHX40 (17q23.1)PBX1 (1q23.3) / DISC1 (1q42.2)PBX1 (1q23.3) / ILDR2 (1q24.1)PBX1 (1q23.3) / LRRC52 (1q24.1)
PBX1 (1q23.3) / RHBG (1q22)TCF3 (19p13.3) / PBX1 (1q23.3)UCK2 (1q24.1) / PBX1 (1q23.3)

Interaction databases
HPRD (Human Protein Reference Database) 08889
IntAct (EBI)PBX1


PCM1 Partners

For further details see the paper/card concerning PCM1

Interaction databases
HPRD (Human Protein Reference Database) 02624
IntAct (EBI)PCM1


PDGFRA Partners

For further details see the paper/card concerning PDGFRA

Fusion genes (updated 2015)BCR (22q11.23) / PDGFRA (4q12)CDK5RAP2 (9q33.2) / PDGFRA (4q12)ETV6 (12p13.2) / PDGFRA (4q12)FIP1L1 (4q12) / PDGFRA (4q12)
KIF5B (10p11.22) / PDGFRA (4q12)STRN (2p22.2) / PDGFRA (4q12)

Interaction databases
HPRD (Human Protein Reference Database) 01429
IntAct (EBI)PDGFRA


PDGFRB Partners

For further details see the paper/card concerning PDGFRB

Fusion genes (updated 2015)ATF7IP (12p13.1) / PDGFRB (5q32)BIN2 (12q13.13) / PDGFRB (5q32)CCDC6 (10q21.2) / PDGFRB (5q32)CCDC88C (14q32.11) / PDGFRB (5q32)
CEP85L (6q22.31) / PDGFRB (5q32)DTD1 (20p11.23) / PDGFRB (5q32)EBF1 (5q33.3) / PDGFRB (5q32)ERC1 (12p13.33) / PDGFRB (5q32)
ETV6 (12p13.2) / PDGFRB (5q32)GIT2 (12q24.11) / PDGFRB (5q32)GOLGA4 (3p22.2) / PDGFRB (5q32)HIP1 (7q11.23) / PDGFRB (5q32)
KANK1 (9p24.3) / PDGFRB (5q32)MYO18A (17q11.2) / PDGFRB (5q32)NAB2 (12q13.3) / PDGFRB (5q32)NDE1 (16p13.11) / PDGFRB (5q32)
NIN (14q22.1) / PDGFRB (5q32)PDE4DIP (1q21.1) / PDGFRB (5q32)PDGFRB (5q32) / DTD1 (20p11.23)PDGFRB (5q32) / ETV6 (12p13.2)
PDGFRB (5q32) / FAR1 (11p15.2)PRKG2 (4q21.21) / PDGFRB (5q32)RABEP1 (17p13.2) / PDGFRB (5q32)SART3 (12q23.3) / PDGFRB (5q32)
SPECC1 (17p11.2) / PDGFRB (5q32)SPTBN1 (2p16.2) / PDGFRB (5q32)TP53BP1 (15q15.3) / PDGFRB (5q32)TPM3 (1q21.3) / PDGFRB (5q32)
TRIP11 (14q32.12) / PDGFRB (5q32)WDR48 (3p22.2) / PDGFRB (5q32)

Interaction databases
HPRD (Human Protein Reference Database) 01423
IntAct (EBI)PDGFRB


PHF1 Partners

For further details see the paper/card concerning PHF1

Interaction databases
HPRD (Human Protein Reference Database) 04195
IntAct (EBI)PHF1


PICALM Partners

For further details see the paper/card concerning PICALM

Fusion genes (updated 2015)ARRB1 (11q13.4) / PICALM (11q14.2)KMT2A (11q23.3) / PICALM (11q14.2)MLLT10 (10p12.31) / PICALM (11q14.2)PICALM (11q14.2) / CCDC81 (11q14.2)
PICALM (11q14.2) / MLLT10 (10p12.31)PICALM (11q14.2) / RP11-849H4.2 ()RCC1 (1p35.3) / PICALM (11q14.2)SYTL2 (11q14.1) / PICALM (11q14.2)

Interaction databases
HPRD (Human Protein Reference Database) 04320
IntAct (EBI)PICALM


PLAG1 Partners

For further details see the paper/card concerning PLAG1

Fusion genes (updated 2015)CHCHD7 (8q12.1) / PLAG1 (8q12.1)COL1A2 (7q21.3) / PLAG1 (8q12.1)COL3A1 (2q32.2) / PLAG1 (8q12.1)CTNNB1 (3p22.1) / PLAG1 (8q12.1)
FGFR1 (8p11.23) / PLAG1 (8q12.1)HAS2 (8q24.13) / PLAG1 (8q12.1)LIFR (5p13.1) / PLAG1 (8q12.1)PLAG1 (8q12.1) / CTNNB1 (3p22.1)
PLAG1 (8q12.1) / TRBJ2-7 (-)RAB2A (8q12.1) / PLAG1 (8q12.1)RAD51B (14q24.1) / PLAG1 (8q12.1)TCEA1 (8q11.23) / PLAG1 (8q12.1)

Interaction databases
HPRD (Human Protein Reference Database) 04321
IntAct (EBI)PLAG1


PML Partners

For further details see the paper/card concerning PML

Fusion genes (updated 2015)PAX5 (9p13.2) / PML (15q24.1)PML (15q24.1) / POLN (4p16.3)PML (15q24.1) / RARA (17q21.2)RARA (17q21.2) / PML (15q24.1)

Interaction databases
HPRD (Human Protein Reference Database) 00023
IntAct (EBI)PML


RARA Partners

For further details see the paper/card concerning RARA

Fusion genes (updated 2015)- () / RARA (17q21.2)BCOR (Xp11.4) / RARA (17q21.2)FIP1L1 (4q12) / RARA (17q21.2)GTF2I (7q11.23) / RARA (17q21.2)
NABP1 (2q32.3) / RARA (17q21.2)NPM1 (5q35.1) / RARA (17q21.2)NUMA1 (11q13.4) / RARA (17q21.2)PML (15q24.1) / RARA (17q21.2)
PRKAR1A (17q24.2) / RARA (17q21.2)RARA (17q21.2) / CA10 (17q21.33)RARA (17q21.2) / CDC6 (17q21.2)RARA (17q21.2) / CDK12 (17q12)
RARA (17q21.2) / COL10A1 (6q22.1)RARA (17q21.2) / HOXB3 (17q21.32)RARA (17q21.2) / MSL1 (17q21.1)RARA (17q21.2) / MYO1D (17q11.2)
RARA (17q21.2) / NARS2 (11q14.1)RARA (17q21.2) / PCTP (17q22)RARA (17q21.2) / PGAP3 (17q12)RARA (17q21.2) / PKIA (8q21.12)
RARA (17q21.2) / PML (15q24.1)RARA (17q21.2) / POLDIP2 (17q11.2)RARA (17q21.2) / PRR11 (17q22)RARA (17q21.2) / PSMD3 (17q21.1)
RARA (17q21.2) / RP11-1407O15.2 ()RARA (17q21.2) / SKAP1 (17q21.32)RARA (17q21.2) / STAC2 (17q12)RARA (17q21.2) / STAT3 (17q21.2)
RARA (17q21.2) / WIPF2 (17q21.1)RARA (17q21.2) / ZNF595 (4p16.3)STAT5B (17q21.2) / RARA (17q21.2)TAOK1 (17q11.2) / RARA (17q21.2)
TBL1XR1 (3q26.32) / RARA (17q21.2)TPCN2 (11q13.3) / RARA (17q21.2)ZBTB16 (11q23.2) / RARA (17q21.2)

Interaction databases
HPRD (Human Protein Reference Database) 06769
IntAct (EBI)RARA


RET Partners

For further details see the paper/card concerning RET

Fusion genes (updated 2015)AKAP13 (15q25.3) / RET (10q11.21)BCR (22q11.23) / RET (10q11.21)CCDC6 (10q21.2) / RET (10q11.21)ERC1 (12p13.33) / RET (10q11.21)
FGFR1OP (6q27) / RET (10q11.21)FKBP15 (9q32) / RET (10q11.21)GOLGA5 (14q32.12) / RET (10q11.21)HOOK3 (8p11.21) / RET (10q11.21)
KIF5B (10p11.22) / RET (10q11.21)KTN1 (14q22.3) / RET (10q11.21)NCOA4 (10q11.23) / RET (10q11.21)PCM1 (8p22) / RET (10q11.21)
PRKAR1A (17q24.2) / RET (10q11.21)RET (10q11.21) / ANK3 (10q21.2)RET (10q11.21) / CCDC6 (10q21.2)RET (10q11.21) / GOLGA5 (14q32.12)
RET (10q11.21) / NCOA4 (10q11.23)RET (10q11.21) / PTCH2 (1p34.1)RET (10q11.21) / TRIM33 (1p13.2)SPECC1L (22q11.23) / RET (10q11.21)
TBL1XR1 (3q26.32) / RET (10q11.21)TRIM24 (7q33) / RET (10q11.21)TRIM27 (6p22.1) / RET (10q11.21)TRIM33 (1p13.2) / RET (10q11.21)

Interaction databases
HPRD (Human Protein Reference Database) 01266
IntAct (EBI)RET


RHOH Partners

For further details see the paper/card concerning RHOH

Fusion genes (updated 2015)IGH (14q32.33) / RHOH (4p14)RHOH (4p14) / BCL6 (3q27.3)RHOH (4p14) / N4BP2 (4p14)

Interaction databases
HPRD (Human Protein Reference Database) 03616
IntAct (EBI)RHOH


ROS1 Partners

For further details see the paper/card concerning ROS1

Fusion genes (updated 2015)CCDC6 (10q21.2) / ROS1 (6q22.1)CD74 (5q32) / ROS1 (6q22.1)CEP85L (6q22.31) / ROS1 (6q22.1)CLIP1 (12q24.31) / ROS1 (6q22.1)
CLTC (17q23.1) / ROS1 (6q22.1)ERC1 (12p13.33) / ROS1 (6q22.1)EZR (6q25.3) / ROS1 (6q22.1)GOPC (6q22.1) / ROS1 (6q22.1)
HLA-A (6p22.1) / ROS1 (6q22.1)KDELR2 (7p22.1) / ROS1 (6q22.1)KIAA1598 () / ROS1 (6q22.1)KMT2A (11q23.3) / ROS1 (6q22.1)
LRIG3 (12q14.1) / ROS1 (6q22.1)MYO5A (15q21.2) / ROS1 (6q22.1)PPFIBP1 (12p11.23) / ROS1 (6q22.1)PWWP2A (5q33.3) / ROS1 (6q22.1)
ROS1 (6q22.1) / CD74 (5q32)SDC4 (20q13.12) / ROS1 (6q22.1)SLC34A2 (4p15.2) / ROS1 (6q22.1)TFG (3q12.2) / ROS1 (6q22.1)
TPM3 (1q21.3) / ROS1 (6q22.1)YWHAE (17p13.3) / ROS1 (6q22.1)ZCCHC8 (12q24.31) / ROS1 (6q22.1)

Interaction databases
HPRD (Human Protein Reference Database) 01295
IntAct (EBI)ROS1


RPN1 Partners

For further details see the paper/card concerning RPN1

Interaction databases
HPRD (Human Protein Reference Database) 01598
IntAct (EBI)RPN1


SLC45A3 Partners

For further details see the paper/card concerning SLC45A3

Interaction databases
HPRD (Human Protein Reference Database) 16312
IntAct (EBI)SLC45A3


SS18 Partners

For further details see the paper/card concerning SS18

Fusion genes (updated 2015)SS18 (18q11.2) / DOCK2 (5q35.1)SS18 (18q11.2) / SSX1 (Xp11.23)SS18 (18q11.2) / SSX2 (Xp11.22)SS18 (18q11.2) / SSX2B (Xp11.22)
SS18 (18q11.2) / SSX4 (Xp11.23)SSX1 (Xp11.23) / SS18 (18q11.2)SSX2 (Xp11.22) / SS18 (18q11.2)TRAPPC8 (18q12.1) / SS18 (18q11.2)

Interaction databases
HPRD (Human Protein Reference Database) 02559
IntAct (EBI)SS18


SSX1 Partners

For further details see the paper/card concerning SSX1

Interaction databases
HPRD (Human Protein Reference Database) 02428
IntAct (EBI)SSX1


TAF15 Partners

For further details see the paper/card concerning TAF15

Fusion genes (updated 2015)NR4A3 (9q22.33) / TAF15 (17q12)PLA2G2A (1p36.13) / TAF15 (17q12)TAF15 (17q12) / AP2B1 (17q12)TAF15 (17q12) / MAN1A2 (1p12)
TAF15 (17q12) / NR4A3 (9q22.33)TAF15 (17q12) / ZNF384 (12p13.31)

Interaction databases
HPRD (Human Protein Reference Database) 09031
IntAct (EBI)TAF15


TAL1 Partners

For further details see the paper/card concerning TAL1

Fusion genes (updated 2015)ST3GAL3 (1p34.1) / TAL1 (1p33)TAL1 (1p33) / RHOA (3p21.31)TAL1 (1p33) / TCR ()TCTA (3p21.31) / TAL1 (1p33)
TRD (-) / TAL1 (1p33)

Interaction databases
HPRD (Human Protein Reference Database) 01753
IntAct (EBI)TAL1


TCF3 Partners

For further details see the paper/card concerning TCF3

Fusion genes (updated 2015)NOP2 (12p13.31) / TCF3 (19p13.3)TCF3 (19p13.3) / AP3D1 (19p13.3)TCF3 (19p13.3) / APC2 (19p13.3)TCF3 (19p13.3) / HLF (17q22)
TCF3 (19p13.3) / NOP2 (12p13.31)TCF3 (19p13.3) / PBX1 (1q23.3)TCF3 (19p13.3) / SYTL5 (Xp11.4)TCF3 (19p13.3) / TFPT (19q13.42)
TCF3 (19p13.3) / ZNF384 (12p13.31)

Interaction databases
HPRD (Human Protein Reference Database) 00918
IntAct (EBI)TCF3


TRD Partners

For further details see the paper/card concerning TRD

Fusion genes (updated 2015)BCL11B (14q32.2) / TRD (-)IGH (14q32.33) / TRD (-)TRD (-) / LMO1 (11p15.4)TRD (-) / LMO2 (11p13)
TRD (-) / NKX2-5 (5q35.1)TRD (-) / PVT1 (8q24.21)TRD (-) / RANBP17 (5q35.1)TRD (-) / TAL1 (1p33)
TRD (-) / TLX1 (10q24.31)TRD (-) / TLX3 (5q35.1)

Interaction databases
HPRD (Human Protein Reference Database) 00000
IntAct (EBI)TRD


TRB Partners

For further details see the paper/card concerning TRB

Fusion genes (updated 2015)TRA (-) / TRB (-)TRB (-) / CCND2 (12p13.32)TRB (-) / HOXA10 (7p15.2)TRB (-) / HOXA11 (7p15.2)
TRB (-) / HOXA@ (-)TRB (-) / IRS4 (Xq22.3)TRB (-) / LCK (1p35.1)TRB (-) / LMO1 (11p15.4)
TRB (-) / LYL1 (19p13.2)TRB (-) / MECOM (3q26.2)TRB (-) / MYB (6q23.3)TRB (-) / NOTCH1 (9q34.3)
TRB (-) / TAL2 (9q31.2)TRB (-) / TLX1 (10q24.31)

Interaction databases
HPRD (Human Protein Reference Database) 00000
IntAct (EBI)TRB


TFE3 Partners

For further details see the paper/card concerning TFE3

Fusion genes (updated 2015)ASPSCR1 (17q25.3) / TFE3 (Xp11.23)CLTC (17q23.1) / TFE3 (Xp11.23)NONO (Xq13.1) / TFE3 (Xp11.23)PARP14 (3q21.1) / TFE3 (Xp11.23)
PRCC (1q23.1) / TFE3 (Xp11.23)RREB1 (6p24.3) / TFE3 (Xp11.23)SFPQ (16q24.1) / TFE3 (Xp11.23)TFE3 (Xp11.23) / ASPSCR1 (17q25.3)
TFE3 (Xp11.23) / CXorf31 ()TFE3 (Xp11.23) / LINC01545 (Xp11.23)TFE3 (Xp11.23) / NONO (Xq13.1)TFE3 (Xp11.23) / PRCC (1q23.1)
TFE3 (Xp11.23) / SFPQ (16q24.1)YAP1 (11q22.1) / TFE3 (Xp11.23)

Interaction databases
HPRD (Human Protein Reference Database) 02439
IntAct (EBI)TFE3


TFG Partners

For further details see the paper/card concerning TFG

Fusion genes (updated 2015)GPR128 () / TFG (3q12.2)MET (7q31.2) / TFG (3q12.2)NTRK1 (1q23.1) / TFG (3q12.2)TFG (3q12.2) / ALK (2p23.2)
TFG (3q12.2) / GPR128 ()TFG (3q12.2) / MET (7q31.2)TFG (3q12.2) / NR4A3 (9q22.33)TFG (3q12.2) / NTRK1 (1q23.1)
TFG (3q12.2) / ROS1 (6q22.1)

Interaction databases
HPRD (Human Protein Reference Database) 03932
IntAct (EBI)TFG


TLX3 Partners

For further details see the paper/card concerning TLX3

Fusion genes (updated 2015)BCL11B (14q32.2) / TLX3 (5q35.1)TLX3 (5q35.1) / NKX2-5 (5q35.1)TLX3 (5q35.1) / RANBP17 (5q35.1)TRD (-) / TLX3 (5q35.1)

Interaction databases
HPRD (Human Protein Reference Database) 06868
IntAct (EBI)TLX3


TMPRSS2 Partners

For further details see the paper/card concerning TMPRSS2

Fusion genes (updated 2015)ARID2 (12q12) / TMPRSS2 (21q22.3)ATF7IP (12p13.1) / TMPRSS2 (21q22.3)TMPRSS2 (21q22.3) / ARFGEF2 (20q13.13)TMPRSS2 (21q22.3) / ATF7IP (12p13.1)
TMPRSS2 (21q22.3) / ERG (21q22.2)TMPRSS2 (21q22.3) / ETV1 (7p21.2)TMPRSS2 (21q22.3) / ETV4 (17q21.31)TMPRSS2 (21q22.3) / ETV5 (3q27.2)
TMPRSS2 (21q22.3) / GRHL2 (8q22.3)

Interaction databases
HPRD (Human Protein Reference Database) 03637
IntAct (EBI)TMPRSS2


TPM3 Partners

For further details see the paper/card concerning TPM3

Fusion genes (updated 2015)B4GALT3 (1q23.3) / TPM3 (1q21.3)JAK2 (9p24.1) / TPM3 (1q21.3)NTRK1 (1q23.1) / TPM3 (1q21.3)TPM3 (1q21.3) / ALK (2p23.2)
TPM3 (1q21.3) / JAK2 (9p24.1)TPM3 (1q21.3) / NTRK1 (1q23.1)TPM3 (1q21.3) / PDGFRB (5q32)TPM3 (1q21.3) / ROS1 (6q22.1)
TPM3 (1q21.3) / TPR (1q31.1)

Interaction databases
HPRD (Human Protein Reference Database) 01840
IntAct (EBI)TPM3


TRIM24 Partners

For further details see the paper/card concerning TRIM24

Fusion genes (updated 2015)TRIM24 (7q33) / FGFR1 (8p11.23)TRIM24 (7q33) / NTRK2 (9q21.33)TRIM24 (7q33) / RET (10q11.21)TRIM24 (7q33) / SVOPL (7q34)
TRIM24 (7q33) / ULK4 (3p22.1)

Interaction databases
HPRD (Human Protein Reference Database) 04556
IntAct (EBI)TRIM24


USP6 Partners

For further details see the paper/card concerning USP6

Fusion genes (updated 2015)CDH11 (16q21) / USP6 (17p13.2)CNBP (3q21.3) / USP6 (17p13.2)COL1A1 (17q21.33) / USP6 (17p13.2)MYH9 (22q12.3) / USP6 (17p13.2)
OMD (9q22.31) / USP6 (17p13.2)THRAP3 (1p34.3) / USP6 (17p13.2)USP6 (17p13.2) / COL1A1 (17q21.33)

Interaction databases
HPRD (Human Protein Reference Database) 06827
IntAct (EBI)USP6


ZNF384 Partners

For further details see the paper/card concerning ZNF384

Fusion genes (updated 2015)EWSR1 (22q12.2) / ZNF384 (12p13.31)TAF15 (17q12) / ZNF384 (12p13.31)TCF3 (19p13.3) / ZNF384 (12p13.31)

Interaction databases
HPRD (Human Protein Reference Database) 18332
IntAct (EBI)ZNF384


© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 5 16:24:06 CEST 2015

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