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DEPDC1B/ELOVL7 (5q12)

Written08-2018Jean-Loup Huret, Philippe Dessen

(Note : for Links provided by Atlas : click)

Identity

Atlas_Id 106659
Phylum Female organs: Breast::
Note Non-annotated chromosomal abnormality. Preliminary data :
if you are an author who wish to write a full paper/card on this translocation, go to  How to contribute

Clinics and Pathology

Disease Breast: Adenocarcinoma

Genes involved and Proteins

Gene NameDEPDC1B
Location 5q12.1

Gene NameELOVL7
Location 5q12.1

Bibliography

A sequence-level map of chromosomal breakpoints in the MCF-7 breast cancer cell line yields insights into the evolution of a cancer genome
Hampton OA, Den Hollander P, Miller CA, Delgado DA, Li J, Coarfa C, Harris RA, Richards S, Scherer SE, Muzny DM, Gibbs RA, Lee AV, Milosavljevic A
Genome Res 2009 Feb;19(2):167-77
PMID 19056696
 
RNA-Seq mapping and detection of gene fusions with a suffix array algorithm
Sakarya O, Breu H, Radovich M, Chen Y, Wang YN, Barbacioru C, Utiramerur S, Whitley PP, Brockman JP, Vatta P, Zhang Z, Popescu L, Muller MW, Kudlingar V, Garg N, Li CY, Kong BS, Bodeau JP, Nutter RC, Gu J, Bramlett KS, Ichikawa JK, Hyland FC, Siddiqui AS
PLoS Comput Biol 2012;8(4):e1002464
PMID 22496636
 


Translocations implicated (Data extracted from papers in the Atlas)

 t(5;5)(q12;q12) DEPDC1B/ELOVL7

External links

Mitelman database t(5;5)(q12;q12) [CaseList]     t(5;5)(q12;q12) [Transloc - MCList]   DEPDC1B/ELOVL7 Fusion - MCList]
COSMIC[ DEPDC1B ]   [ ELOVL7 ]
arrayMap arrayMap ((UZH-SIB Zurich)   [auto + random 100 samples .. if exist ]   [tabulated segments]
 
 
Disease databaseDEPDC1B/ELOVL7 (5q12)
REVIEW articlesautomatic search in PubMed
Last year articlesautomatic search in PubMed


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indexed on : Fri Oct 5 17:20:23 CEST 2018


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For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.