ADAMTS19/SLC27A6 (5q23)

Identity

Atlas_Id	106711
Phylum	Female organs: Breast::
WHO/OMS Classification	Female organs
Note	Non-annotated chromosomal abnormality. Preliminary data : if you are an author who wish to write a full paper/card on this translocation, go to  How to contribute

Clinics and Pathology

Disease

Breast: Adenocarcinoma

Genes involved and Proteins

Gene Name	ADAMTS19
Location	5q23.3

Gene Name	SLC27A6
Location	5q23.3

Bibliography

A novel bioinformatics pipeline for identification and characterization of fusion transcripts in breast cancer and normal cell lines

Asmann YW, Hossain A, Necela BM, Middha S, Kalari KR, Sun Z, Chai HS, Williamson DW, Radisky D, Schroth GP, Kocher JP, Perez EA, Thompson EA

Nucleic Acids Res 2011 Aug;39(15):e100

PMID 21622959

RNA-Seq mapping and detection of gene fusions with a suffix array algorithm

Sakarya O, Breu H, Radovich M, Chen Y, Wang YN, Barbacioru C, Utiramerur S, Whitley PP, Brockman JP, Vatta P, Zhang Z, Popescu L, Muller MW, Kudlingar V, Garg N, Li CY, Kong BS, Bodeau JP, Nutter RC, Gu J, Bramlett KS, Ichikawa JK, Hyland FC, Siddiqui AS

PLoS Comput Biol 2012;8(4):e1002464

PMID 22496636

Translocations implicated (Data extracted from papers in the Atlas)

	t(5;5)(q23;q23) ADAMTS19/SLC27A6

External links

Mitelman database	t(5;5)(q23;q23) [CaseList]     t(5;5)(q23;q23) [Transloc - MCList]   ADAMTS19/SLC27A6 Fusion - MCList]
COSMIC	[ ADAMTS19 ]   [ SLC27A6 ]
arrayMap	arrayMap ((UZH-SIB Zurich)   [auto + random 100 samples .. if exist ]   [tabulated segments]
Disease database	ADAMTS19/SLC27A6 (5q23)

REVIEW articles	automatic search in PubMed
Last year articles	automatic search in PubMed

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Thu Feb 14 17:54:14 CET 2019

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