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t(17;20)(q12;q13) VAPB/IKZF3

Written2018-01Jean-Loup Huret, Philippe Dessen

(Note : for Links provided by Atlas : click)

Identity

Atlas_Id 109212
Phylum Female organs: Breast::
Note Non-annotated chromosomal abnormality. Preliminary data :
if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

Clinics and Pathology

Disease Female organs: Breast:Adenocarcinoma

Genes involved and Proteins

Gene NameVAPB

Gene NameIKZF3
Location 17q12-q21.1

Bibliography

Evaluation of paired-end sequencing strategies for detection of genome rearrangements in cancer
Bashir A, Volik S, Collins C, Bafna V, Raphael BJ
PLoS Comput Biol 2008 Apr 25;4(4):e1000051
PMID 18404202
 
Identification of fusion genes in breast cancer by paired-end RNA-sequencing
Edgren H, Murumagi A, Kangaspeska S, Nicorici D, Hongisto V, Kleivi K, Rye IH, Nyberg S, Wolf M, Borresen-Dale AL, Kallioniemi O
Genome Biol 2011;12(1):R6
PMID 21247443
 
Functionally recurrent rearrangements of the MAST kinase and Notch gene families in breast cancer
Robinson DR, Kalyana-Sundaram S, Wu YM, Shankar S, Cao X, Ateeq B, Asangani IA, Iyer M, Maher CA, Grasso CS, Lonigro RJ, Quist M, Siddiqui J, Mehra R, Jing X, Giordano TJ, Sabel MS, Kleer CG, Palanisamy N, Natrajan R, Lambros MB, Reis-Filho JS, Kumar-Sinha C, Chinnaiyan AM
Nat Med 2011 Nov 20;17(12):1646-51
PMID 22101766
 


Translocations implicated (Data extracted from papers in the Atlas)

 t(17;20)(q12;q13) VAPB/IKZF3

External links

Mitelman database t(17;20)(q12;q13) [CaseList]    t(17;20)(q12;q13) [Transloc - MCList] VAPB/IKZF3 [Fusion - MCList]
COSMIC[ VAPB ]   [ IKZF3 ]
arrayMap arrayMap ((UZH-SIB Zurich)   [auto + random 100 samples .. if exist ]   [tabulated segments]
 
 
Disease databaset(17;20)(q12;q13) VAPB/IKZF3
REVIEW articlesautomatic search in PubMed
Last year articlesautomatic search in PubMed


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indexed on : Tue Feb 6 18:22:50 CET 2018


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For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.