PHF11 (PHD finger protein 11)

2003-06-01  

Identity

HGNC
PHF11
LOCATION
13q14.2
LOCUSID
51131
ALIAS
APY,BCAP,IGEL,IGER,IGHER,NY-REN-34,NYREN34
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 51131
MIM: 607796
HGNC: 17024
Ensembl: ENSG00000136147

Variants:

dbSNP: 51131
ClinVar: 51131
TCGA: ENSG00000136147
COSMIC: PHF11

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000136147ENST00000357596Q9UIL8
ENSG00000136147ENST00000378319Q9UIL8
ENSG00000136147ENST00000426879H0Y4X7
ENSG00000136147ENST00000442195X6RH80
ENSG00000136147ENST00000465045J3KR57
ENSG00000136147ENST00000485919C9JQV2
ENSG00000136147ENST00000488958Q9UIL8
ENSG00000136147ENST00000496612C9JWH0
ENSG00000136147ENST00000496623B4DTX8

Expression (GTEx)

0
5
10
15
20
25
30
35
40
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
177034122007Genetic susceptibility to respiratory syncytial virus bronchiolitis is predominantly associated with innate immune genes.100
127545102003Positional cloning of a quantitative trait locus on chromosome 13q14 that influences immunoglobulin E levels and asthma.60
192476922009Analyses of associations with asthma in four asthma population samples from Canada and Australia.39
192649732009Assessing the reproducibility of asthma candidate gene associations, using genome-wide data.36
177029652007Comprehensive testing of positionally cloned asthma genes in two populations.32
177029652007Comprehensive testing of positionally cloned asthma genes in two populations.32
192589232009Genetic susceptibility to respiratory syncytial virus bronchiolitis in preterm children is associated with airway remodeling genes and innate immune genes.26
200855992009A multi-centre study of candidate genes for wheeze and allergy: the International Study of Asthma and Allergies in Childhood Phase 2.23
200855992009A multi-centre study of candidate genes for wheeze and allergy: the International Study of Asthma and Allergies in Childhood Phase 2.23
205032872010Interleukin-9 polymorphism in infants with respiratory syncytial virus infection: an opposite effect in boys and girls.17

Citation

Dessen P

PHF11 (PHD finger protein 11)

Atlas Genet Cytogenet Oncol Haematol. 2003-06-01

Online version: http://atlasgeneticsoncology.org/gene/41703/phf11