CHODL (chondrolectin)

2012-06-01  

Identity

HGNC
CHODL
LOCATION
21q21.1
LOCUSID
140578
ALIAS
C21orf68,MT75,PRED12
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 140578
MIM: 607247
HGNC: 17807
Ensembl: ENSG00000154645

Variants:

dbSNP: 140578
ClinVar: 140578
TCGA: ENSG00000154645
COSMIC: CHODL

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000154645ENST00000299295Q9H9P2
ENSG00000154645ENST00000338326A0A0C4DFS2
ENSG00000154645ENST00000400127Q9H9P2
ENSG00000154645ENST00000400128Q9H9P2
ENSG00000154645ENST00000400131A0A0C4DFS2
ENSG00000154645ENST00000400135A0A0C4DFS2
ENSG00000154645ENST00000543733Q9H9P2

Expression (GTEx)

0
5
10
15
20
25
30
35
40
45
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
120792842002Molecular cloning and characterization of human chondrolectin, a novel type I transmembrane protein homologous to C-type lectins.6
220165082011Chondrolectin is a novel diagnostic biomarker and a therapeutic target for lung cancer.6
126210222003A novel alternative spliced chondrolectin isoform lacking the transmembrane domain is expressed during T cell maturation.5
176063882007Expression and localization of CHODLDeltaE/CHODLfDeltaE, the soluble isoform of chondrolectin.3

Citation

Dessen P

CHODL (chondrolectin)

Atlas Genet Cytogenet Oncol Haematol. 2012-06-01

Online version: http://atlasgeneticsoncology.org/gene/52746/chodl