PCDHGA3 (protocadherin gamma subfamily A, 3)

2016-12-01  

Identity

HGNC
PCDHGA3
LOCATION
5q31.3
LOCUSID
56112
ALIAS
PCDH-GAMMA-A3

Other Information

Locus ID:

NCBI: 56112
MIM: 606290
HGNC: 8701
Ensembl: ENSG00000254245

Variants:

dbSNP: 56112
ClinVar: 56112
TCGA: ENSG00000254245
COSMIC: PCDHGA3

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000254245ENST00000253812Q9Y5H0
ENSG00000254245ENST00000612467A0A087WYH2
ENSG00000254245ENST00000619750Q9Y5H0

Expression (GTEx)

0
1
2
3
4
5
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
N/A

References

Pubmed IDYearTitleCitations
301360782018DNA methylation associated with healthy aging of elderly twins.29
301360782018DNA methylation associated with healthy aging of elderly twins.29
274725182016New Cell Adhesion Molecules in Human Ischemic Cardiomyopathy. PCDHGA3 Implications in Decreased Stroke Volume and Ventricular Dysfunction.12
277488132016Protocadherin γ A3 is expressed in follicular lymphoma irrespective of BCL2 status and is associated with tumor cell growth.4
274725182016New Cell Adhesion Molecules in Human Ischemic Cardiomyopathy. PCDHGA3 Implications in Decreased Stroke Volume and Ventricular Dysfunction.12
277488132016Protocadherin γ A3 is expressed in follicular lymphoma irrespective of BCL2 status and is associated with tumor cell growth.4
266082782015The clustered protocadherin endolysosomal trafficking motif mediates cytoplasmic association.11
266082782015The clustered protocadherin endolysosomal trafficking motif mediates cytoplasmic association.11
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.78
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.78

Citation

Dessen P

PCDHGA3 (protocadherin gamma subfamily A, 3)

Atlas Genet Cytogenet Oncol Haematol. 2016-12-01

Online version: http://atlasgeneticsoncology.org/gene/56643/favicon/js/lib/popper.js