GYPB (glycophorin B (MNS blood group))

2018-02-01  

Identity

HGNC
GYPB
LOCATION
4q31.21
LOCUSID
2994
ALIAS
CD235b,GPB,GYP,GYPA,MNS,PAS-3,SS

Other Information

Locus ID:

NCBI: 2994
MIM: 617923
HGNC: 4703
Ensembl: ENSG00000250361

Variants:

dbSNP: 2994
ClinVar: 2994
TCGA: ENSG00000250361
COSMIC: GYPB

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000250361ENST00000429670E7ERJ5
ENSG00000250361ENST00000502664P06028
ENSG00000250361ENST00000504951D6RA87
ENSG00000250361ENST00000505583D6RA87
ENSG00000250361ENST00000506516D6RBP2
ENSG00000250361ENST00000506679D6RAD9
ENSG00000250361ENST00000511198D6RA87
ENSG00000250361ENST00000513128P06028
ENSG00000250361ENST00000638448A0A1W2PQZ9

Expression (GTEx)

0
1
2
3
4
5
6
7
8
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
MalariaKEGGko05144
MalariaKEGGhsa05144
HemostasisREACTOMER-HSA-109582
Cell surface interactions at the vascular wallREACTOMER-HSA-202733

References

Pubmed IDYearTitleCitations
381588812024The study of variant s antigen expression revealing a novel c.160C>T (p.Arg54Cys) variant on GYPB*s allele associated with partial s phenotype.0
381588812024The study of variant s antigen expression revealing a novel c.160C>T (p.Arg54Cys) variant on GYPB*s allele associated with partial s phenotype.0
379212392023Uncommon S-s-U+ phenotype encoded by two novel GYPB alleles.0
379212392023Uncommon S-s-U+ phenotype encoded by two novel GYPB alleles.0
351380352022Joint efficacy of the three biomarkers SNCA, GYPB and HBG1 for atrial fibrillation and stroke: Analysis via the support vector machine neural network.2
351386392022Characterization of alternatively spliced transcript variants of glycophorin A and glycophorin B genes in Chinese blood donors.0
351380352022Joint efficacy of the three biomarkers SNCA, GYPB and HBG1 for atrial fibrillation and stroke: Analysis via the support vector machine neural network.2
351386392022Characterization of alternatively spliced transcript variants of glycophorin A and glycophorin B genes in Chinese blood donors.0
333257482021High-throughput genotyping assays for identification of glycophorin B deletion variants in population studies.2
337334752021A pair of S-silencing single nucleotide variants cis-linked on GYPB.1
341176422021Molecular genetic analysis of Mi(a) -positive hybrid glycophorins revealed two novel alleles of GP.Vw and multiple variant transcripts of GYPB existing in both the homozygous GP.Mur and wild-type GPB individuals.0
333257482021High-throughput genotyping assays for identification of glycophorin B deletion variants in population studies.2
337334752021A pair of S-silencing single nucleotide variants cis-linked on GYPB.1
341176422021Molecular genetic analysis of Mi(a) -positive hybrid glycophorins revealed two novel alleles of GP.Vw and multiple variant transcripts of GYPB existing in both the homozygous GP.Mur and wild-type GPB individuals.0
322019612020Characterization of GYP*Mur and novel GYP*Bun-like hybrids in Thai blood donors reveals a qualitatively altered s antigen.5

Citation

Dessen P

GYPB (glycophorin B (MNS blood group))

Atlas Genet Cytogenet Oncol Haematol. 2018-02-01

Online version: http://atlasgeneticsoncology.org/gene/57353/js/lib/js/lib/jquery-3.5.1.min.js