APOL4 (apolipoprotein L4)

2014-11-01  

Identity

HGNC
APOL4
LOCATION
22q12.3
LOCUSID
80832
ALIAS
APOL-IV,APOLIV
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 80832
MIM: 607254
HGNC: 14867
Ensembl: ENSG00000100336

Variants:

dbSNP: 80832
ClinVar: 80832
TCGA: ENSG00000100336
COSMIC: APOL4

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000100336ENST00000328429Q9BRG6
ENSG00000100336ENST00000332987Q9BPW4
ENSG00000100336ENST00000352371Q9BPW4
ENSG00000100336ENST00000397275Q9BRG6
ENSG00000100336ENST00000419360B1AHJ0
ENSG00000100336ENST00000436763B1AHJ2
ENSG00000100336ENST00000457630F5H1P9
ENSG00000100336ENST00000493203E9PS31
ENSG00000100336ENST00000616056Q9BPW4

Expression (GTEx)

0
5
10
15
20
25
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
186322552008Association of SNPs and haplotypes in APOL1, 2 and 4 with schizophrenia.14
186322552008Association of SNPs and haplotypes in APOL1, 2 and 4 with schizophrenia.14
186322552008Association of SNPs and haplotypes in APOL1, 2 and 4 with schizophrenia.14
186322552008Association of SNPs and haplotypes in APOL1, 2 and 4 with schizophrenia.14
159496552005Investigation of the apolipoprotein-L (APOL) gene family and schizophrenia using a novel DNA pooling strategy for public database SNPs.5
159496552005Investigation of the apolipoprotein-L (APOL) gene family and schizophrenia using a novel DNA pooling strategy for public database SNPs.5
119449862002The apolipoprotein L gene cluster has emerged recently in evolution and is expressed in human vascular tissue.80
119449862002The apolipoprotein L gene cluster has emerged recently in evolution and is expressed in human vascular tissue.80

Citation

Dessen P

APOL4 (apolipoprotein L4)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/60434/deep-insight-explorer/css/card-gene.css