CALY (calcyon neuron specific vesicular protein)

CALY (calcyon neuron specific vesicular protein)

2014-11-01 Affiliation

Identity

HGNC

LOCATION

10q26.3

LOCUSID

ALIAS

DRD1IP,NSG3

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 50632
MIM: 604647
HGNC: 17938
Ensembl: ENSG00000130643

Variants:

dbSNP: 50632
ClinVar: 50632
TCGA: ENSG00000130643
COSMIC: CALY

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000130643	ENST00000252939	Q9NYX4
ENSG00000130643	ENST00000368555	Q9NYX4
ENSG00000130643	ENST00000368558	Q9NYX4

Expression (GTEx)

0

50

100

150

200

250

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

Pathways

Pathway	Source	External ID
Dopaminergic synapse	KEGG	ko04728
Dopaminergic synapse	KEGG	hsa04728

Protein levels (Protein atlas)

Not detected

Low

Medium

High

cerebral cortex

cerebellum

hippocampus

caudate

hypothalamus

thyroid gland

parathyroid gland

adrenal gland

nasopharynx

bronchus

lung

oral mucosa

salivary gland

esophagus

stomach 1

stomach 2

duodenum

small intestine

colon

rectum

liver

gallbladder

pancreas

kidney

urinary bladder

testis

epididymis

seminal vesicle

prostate

vagina

ovary

fallopian tube

endometrium 1

endometrium 2

cervix, uterine

placenta

breast

heart muscle

smooth muscle

skeletal muscle

soft tissue 1

soft tissue 2

adipose tissue

skin 1

skin 2

appendix

spleen

lymph node

tonsil

bone marrow

References

Pubmed ID	Year	Title	Citations
25376768	2015	Complementary roles of the neuron-enriched endosomal proteins NEEP21 and calcyon in neuronal vesicle trafficking.	14
25376768	2015	Complementary roles of the neuron-enriched endosomal proteins NEEP21 and calcyon in neuronal vesicle trafficking.	14
22843680	2012	Calcyon forms a novel ternary complex with dopamine D1 receptor through PSD-95 protein and plays a role in dopamine receptor internalization.	14
22843680	2012	Calcyon forms a novel ternary complex with dopamine D1 receptor through PSD-95 protein and plays a role in dopamine receptor internalization.	14
21415033	2011	Association of the calcyon neuron-specific vesicular protein gene (CALY) with adolescent smoking initiation in China and California.	6
21415033	2011	Association of the calcyon neuron-specific vesicular protein gene (CALY) with adolescent smoking initiation in China and California.	6
20468064	2010	Association study of 182 candidate genes in anorexia nervosa.	32
20602615	2010	Physiogenomic analysis of statin-treated patients: domain-specific counter effects within the ACACB gene on low-density lipoprotein cholesterol?	3
20468064	2010	Association study of 182 candidate genes in anorexia nervosa.	32
20602615	2010	Physiogenomic analysis of statin-treated patients: domain-specific counter effects within the ACACB gene on low-density lipoprotein cholesterol?	3
19352218	2009	Candidate gene analysis in an on-going genome-wide association study of attention-deficit hyperactivity disorder: suggestive association signals in ADRA1A.	12
19352218	2009	Candidate gene analysis in an on-going genome-wide association study of attention-deficit hyperactivity disorder: suggestive association signals in ADRA1A.	12
17885599	2007	Intracellular dynamics of calcyon, a neuron-specific vesicular protein.	7
17885599	2007	Intracellular dynamics of calcyon, a neuron-specific vesicular protein.	7
16385451	2006	A scan of chromosome 10 identifies a novel locus showing strong association with late-onset Alzheimer disease.	83

Citation

Dessen P

CALY (calcyon neuron specific vesicular protein)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/61395/js/lib/bootstrap.min.js