GDPD1 (glycerophosphodiester phosphodiesterase domain containing 1)

2014-11-01  

Identity

HGNC
GDPD1
LOCATION
17q22
LOCUSID
284161
ALIAS
GDE4
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 284161
MIM: 616317
HGNC: 20883
Ensembl: ENSG00000153982

Variants:

dbSNP: 284161
ClinVar: 284161
TCGA: ENSG00000153982
COSMIC: GDPD1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000153982ENST00000284116Q8N9F7
ENSG00000153982ENST00000578026J3KTA9
ENSG00000153982ENST00000579020J3QQN7
ENSG00000153982ENST00000579076J3QRR6
ENSG00000153982ENST00000581140Q8N9F7
ENSG00000153982ENST00000581276Q8N9F7

Expression (GTEx)

0
5
10
15
20
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
MetabolismREACTOMER-HSA-1430728
Metabolism of lipids and lipoproteinsREACTOMER-HSA-556833
Phospholipid metabolismREACTOMER-HSA-1483257
PI MetabolismREACTOMER-HSA-1483255
Glycerophospholipid catabolismREACTOMER-HSA-6814848

References

Pubmed IDYearTitleCitations
346730202021Development of a selective fluorescence-based enzyme assay for glycerophosphodiesterase family members GDE4 and GDE7.2
346730202021Development of a selective fluorescence-based enzyme assay for glycerophosphodiesterase family members GDE4 and GDE7.2
330222222020Structural Variants Create New Topological-Associated Domains and Ectopic Retinal Enhancer-Gene Contact in Dominant Retinitis Pigmentosa.48
330222222020Structural Variants Create New Topological-Associated Domains and Ectopic Retinal Enhancer-Gene Contact in Dominant Retinitis Pigmentosa.48
189911422008Isolation, characterization and molecular 3D model of human GDE4, a novel membrane protein containing glycerophosphodiester phosphodiesterase domain.6
189911422008Isolation, characterization and molecular 3D model of human GDE4, a novel membrane protein containing glycerophosphodiester phosphodiesterase domain.6
146129812003A novel splice variant of human gene GDPD1 is mainly expressed in human ovary and small intestine.1
146129812003A novel splice variant of human gene GDPD1 is mainly expressed in human ovary and small intestine.1

Citation

Dessen P

GDPD1 (glycerophosphodiester phosphodiesterase domain containing 1)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/63746/gene-fusions/css/lib/js/web-card-gene.js