RCL1 (RNA terminal phosphate cyclase like 1)

2014-11-01  

Identity

HGNC
RCL1
LOCATION
9p24.1
LOCUSID
10171
ALIAS
RNAC,RPCL1
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 10171
MIM: 611405
HGNC: 17687
Ensembl: ENSG00000120158

Variants:

dbSNP: 10171
ClinVar: 10171
TCGA: ENSG00000120158
COSMIC: RCL1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000120158ENST00000381728Q9Y2P8
ENSG00000120158ENST00000381730Q9Y2P8
ENSG00000120158ENST00000381732Q5VYW8
ENSG00000120158ENST00000381750Q9Y2P8
ENSG00000120158ENST00000441844Q5VZU2
ENSG00000120158ENST00000442869Q5VZU3
ENSG00000120158ENST00000448872Q9Y2P8

Expression (GTEx)

0
5
10
15
20
25
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
Ribosome biogenesis in eukaryotesKEGGko03008
Ribosome biogenesis in eukaryotesKEGGhsa03008
Gene ExpressionREACTOMER-HSA-74160
rRNA processingREACTOMER-HSA-72312
Major pathway of rRNA processing in the nucleolus and cytosolREACTOMER-HSA-6791226
rRNA modification in the nucleus and cytosolREACTOMER-HSA-6790901
rRNA processing in the nucleus and cytosolREACTOMER-HSA-8868773

References

Pubmed IDYearTitleCitations
283222742018A rare missense variant in RCL1 segregates with depression in extended families.14
283222742018A rare missense variant in RCL1 segregates with depression in extended families.14
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.78
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.78

Citation

Dessen P

RCL1 (RNA terminal phosphate cyclase like 1)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/72558/meetings/favicon/apple-touch-icon.png