TTC39A (tetratricopeptide repeat domain 39A)

2014-11-01  

Identity

HGNC
TTC39A
LOCATION
1p32.3
LOCUSID
22996
ALIAS
C1orf34,DEME-6
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 22996
HGNC: 18657
Ensembl: ENSG00000085831

Variants:

dbSNP: 22996
ClinVar: 22996
TCGA: ENSG00000085831
COSMIC: TTC39A

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000085831ENST00000262675D3DQ30
ENSG00000085831ENST00000262676Q5SRH9
ENSG00000085831ENST00000371747A0A0A0MRQ0
ENSG00000085831ENST00000371750Q5SRH9
ENSG00000085831ENST00000371750A0A140VJY6
ENSG00000085831ENST00000380849U5GXS1
ENSG00000085831ENST00000401051F8W961
ENSG00000085831ENST00000411642E9PAZ4
ENSG00000085831ENST00000413473Q5SRH9
ENSG00000085831ENST00000422925A0A0A0MSH8
ENSG00000085831ENST00000439482A0A0A0MSW9
ENSG00000085831ENST00000447632Q5SRH9
ENSG00000085831ENST00000525906E9PHX9
ENSG00000085831ENST00000527205E9PQX3
ENSG00000085831ENST00000530004Q5SRH9
ENSG00000085831ENST00000532836E9PQ33

Expression (GTEx)

0
5
10
15
20
25
30
35
40
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

Citation

Dessen P

TTC39A (tetratricopeptide repeat domain 39A)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/75291/ttc39a