TTC9B (tetratricopeptide repeat domain 9B)

2014-11-01  

Identity

HGNC
TTC9B
LOCATION
19q13.2
LOCUSID
148014
ALIAS
-

Other Information

Locus ID:

NCBI: 148014
HGNC: 26395
Ensembl: ENSG00000174521

Variants:

dbSNP: 148014
ClinVar: 148014
TCGA: ENSG00000174521
COSMIC: TTC9B

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000174521ENST00000311308Q8N6N2

Expression (GTEx)

0
50
100
150
200
250
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
265033112016Replication of Epigenetic Postpartum Depression Biomarkers and Variation with Hormone Levels.34
265033112016Replication of Epigenetic Postpartum Depression Biomarkers and Variation with Hormone Levels.34
243173102014Seeing the future: epigenetic biomarkers of postpartum depression.6
243173102014Seeing the future: epigenetic biomarkers of postpartum depression.6

Citation

Dessen P

TTC9B (tetratricopeptide repeat domain 9B)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/75302/case-report-explorer/js/lib/zoomerang.js