COL25A1 (collagen type XXV alpha 1 chain)

2003-05-01  

Identity

HGNC
LOCATION
4q25
LOCUSID
ALIAS
AMY,CFEOM5,CLAC,CLAC-P,CLACP
FUSION GENES

Other Information

Locus ID:

NCBI: 84570
MIM: 610004
HGNC: 18603
Ensembl: ENSG00000188517

Variants:

dbSNP: 84570
ClinVar: 84570
TCGA: ENSG00000188517
COSMIC: COL25A1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000188517ENST00000399126Q9BXS0
ENSG00000188517ENST00000399127A8MWQ5
ENSG00000188517ENST00000399132Q9BXS0
ENSG00000188517ENST00000494183E9PNV9
ENSG00000188517ENST00000505591D6R8Y2
ENSG00000188517ENST00000512961H0YAE1
ENSG00000188517ENST00000610288A0A087WZJ5
ENSG00000188517ENST00000622134A0A087X1E1
ENSG00000188517ENST00000642955A0A2R8Y760

Expression (GTEx)

0
5
10
15
20
25
30

Pathways

PathwaySourceExternal ID
Extracellular matrix organizationREACTOMER-HSA-1474244
Collagen formationREACTOMER-HSA-1474290
Collagen biosynthesis and modifying enzymesREACTOMER-HSA-1650814
Degradation of the extracellular matrixREACTOMER-HSA-1474228
Collagen degradationREACTOMER-HSA-1442490
Collagen chain trimerizationREACTOMER-HSA-8948216

References

Pubmed IDYearTitleCitations
350775972022Recessive variants in COL25A1 gene as novel cause of arthrogryposis multiplex congenita with ocular congenital cranial dysinnervation disorder.6
350775972022Recessive variants in COL25A1 gene as novel cause of arthrogryposis multiplex congenita with ocular congenital cranial dysinnervation disorder.6
332878992020Collagenous Alzheimer amyloid plaque component impacts on the compaction of amyloid-β plaques.8
332878992020Collagenous Alzheimer amyloid plaque component impacts on the compaction of amyloid-β plaques.8
255002612015Recessive mutations in COL25A1 are a cause of congenital cranial dysinnervation disorder.21
264860312015Recessive COL25A1 mutations cause isolated congenital ptosis or exotropic Duane syndrome with synergistic divergence.7
255002612015Recessive mutations in COL25A1 are a cause of congenital cranial dysinnervation disorder.21
264860312015Recessive COL25A1 mutations cause isolated congenital ptosis or exotropic Duane syndrome with synergistic divergence.7
222971512012Association of COL25A1 with comorbid antisocial personality disorder and substance dependence.8
230188672012Genome-wide methylation profiling identifies hypermethylated biomarkers in high-grade cervical intraepithelial neoplasia.26
222971512012Association of COL25A1 with comorbid antisocial personality disorder and substance dependence.8
230188672012Genome-wide methylation profiling identifies hypermethylated biomarkers in high-grade cervical intraepithelial neoplasia.26
216883842011Genome-wide association analysis of age at onset in schizophrenia in a European-American sample.14
216883842011Genome-wide association analysis of age at onset in schizophrenia in a European-American sample.14
185014772010Genetic association to the amyloid plaque associated protein gene COL25A1 in Alzheimer's disease.19

Citation

Dessen P

COL25A1 (collagen type XXV alpha 1 chain)

Atlas Genet Cytogenet Oncol Haematol. 2003-05-01

Online version: http://atlasgeneticsoncology.org/gene/40124/col25a1