ABCB11 (ATP binding cassette subfamily B member 11)

2007-02-01  

Identity

HGNC
LOCATION
2q31.1
LOCUSID
ALIAS
ABC16,BRIC2,BSEP,PFIC-2,PFIC2,PGY4,SPGP
FUSION GENES

Other Information

Locus ID:

NCBI: 8647
MIM: 603201
HGNC: 42
Ensembl: ENSG00000073734

Variants:

dbSNP: 8647
ClinVar: 8647
TCGA: ENSG00000073734
COSMIC: ABCB11

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000073734ENST00000439188H7C486
ENSG00000073734ENST00000647920A0A3B3ITV9
ENSG00000073734ENST00000648875A0A3B3ISD4
ENSG00000073734ENST00000649448A0A3B3IS78
ENSG00000073734ENST00000650372O95342

Expression (GTEx)

0
5
10
15

Pathways

PathwaySourceExternal ID
ABC transportersKEGGko02010
ABC transportersKEGGhsa02010
Bile secretionKEGGko04976
Bile secretionKEGGhsa04976
MetabolismREACTOMER-HSA-1430728
Metabolism of lipids and lipoproteinsREACTOMER-HSA-556833
Bile acid and bile salt metabolismREACTOMER-HSA-194068
Synthesis of bile acids and bile saltsREACTOMER-HSA-192105
Synthesis of bile acids and bile salts via 7alpha-hydroxycholesterolREACTOMER-HSA-193368
Recycling of bile acids and saltsREACTOMER-HSA-159418
Endocrine resistanceKEGGko01522
Endocrine resistanceKEGGhsa01522

Protein levels (Protein atlas)

Not detected
Low
Medium
High

PharmGKB

Entity IDNameTypeEvidenceAssociationPKPDPMIDs
PA133950441hmg coa reductase inhibitorsChemicalPathwayassociated
PA134308647rosuvastatinChemicalPathwayassociated
PA152241907lapatinibChemicalMultilinkAnnotationassociated23556451
PA451089pravastatinChemicalPathwayassociated

References

Pubmed IDYearTitleCitations
381086582024Molecular and computational characterization of ABCB11 and ABCG5 variants in Tunisian patients with neonatal/infantile low-GGT intrahepatic cholestasis: Genetic diagnosis and genotype-phenotype correlation assessment.1
381640422024Cav-1 regulates the bile salt export pump on the canalicular membrane of hepatocytes by PKCα-associated signalling under cholesterol stimulation.1
381086582024Molecular and computational characterization of ABCB11 and ABCG5 variants in Tunisian patients with neonatal/infantile low-GGT intrahepatic cholestasis: Genetic diagnosis and genotype-phenotype correlation assessment.1
381640422024Cav-1 regulates the bile salt export pump on the canalicular membrane of hepatocytes by PKCα-associated signalling under cholesterol stimulation.1
369959962023Native liver survival in bile salt export pump deficiency: results of a retrospective cohort study.1
379498472023Structural basis of bile salt extrusion and small-molecule inhibition in human BSEP.0
369959962023Native liver survival in bile salt export pump deficiency: results of a retrospective cohort study.1
379498472023Structural basis of bile salt extrusion and small-molecule inhibition in human BSEP.0
343482752022Common ABCB4 and ABCB11 Genotypes Are Associated with Idiopathic Chronic Cholestasis in Adults.3
349422792022Heterozygous mutations of ATP8B1, ABCB11 and ABCB4 cause mild forms of Progressive Familial Intrahepatic Cholestasis in a pediatric cohort.2
351531752022A study of exons 14, 15, and 24 of the ABCB11 gene in Egyptian children with normal GGT cholestasis.0
358942402022Clinical phenotype of adult-onset liver disease in patients with variants in ABCB4, ABCB11, and ATP8B1.7
343482752022Common ABCB4 and ABCB11 Genotypes Are Associated with Idiopathic Chronic Cholestasis in Adults.3
349422792022Heterozygous mutations of ATP8B1, ABCB11 and ABCB4 cause mild forms of Progressive Familial Intrahepatic Cholestasis in a pediatric cohort.2
351531752022A study of exons 14, 15, and 24 of the ABCB11 gene in Egyptian children with normal GGT cholestasis.0

Citation

Dessen P

ABCB11 (ATP binding cassette subfamily B member 11)

Atlas Genet Cytogenet Oncol Haematol. 2007-02-01

Online version: http://atlasgeneticsoncology.org/gene/45851/abcb11