SUPT20H (SPT20 homolog, SAGA complex component)

ARTICLE CONTENTS

To the top

Other actions (beta)

Download as PDF

SUPT20H (SPT20 homolog, SAGA complex component)

2007-02-01 Affiliation

Identity

HGNC

LOCATION

13q13.3

LOCUSID

ALIAS

C13,C13orf19,FAM48A,FP757,P38IP,SPT20

FUSION GENES

Show Gene Fusions

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 55578
MIM: 613417
HGNC: 20596
Ensembl: ENSG00000102710

Variants:

dbSNP: 55578
ClinVar: 55578
TCGA: ENSG00000102710
COSMIC: SUPT20H

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000102710	ENST00000350612	Q8NEM7
ENSG00000102710	ENST00000356185	Q8NEM7
ENSG00000102710	ENST00000356185	A0A024RDW2
ENSG00000102710	ENST00000360252	Q8NEM7
ENSG00000102710	ENST00000360252	A0A024RDW2
ENSG00000102710	ENST00000464744	Q8NEM7
ENSG00000102710	ENST00000464744	A0A024RDW2
ENSG00000102710	ENST00000469488	H7C5F9
ENSG00000102710	ENST00000475892	Q8NEM7
ENSG00000102710	ENST00000490716	R4GND2
ENSG00000102710	ENST00000495071	B4E2D5
ENSG00000102710	ENST00000497318	C9JQS2
ENSG00000102710	ENST00000542180	F6S7C4

Expression (GTEx)

0

10

20

30

40

50

60

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

Pathways

Pathway	Source	External ID
Autophagy - animal	KEGG	ko04140
Autophagy - animal	KEGG	hsa04140
Chromatin organization	REACTOME	R-HSA-4839726
Chromatin modifying enzymes	REACTOME	R-HSA-3247509
HATs acetylate histones	REACTOME	R-HSA-3214847

Protein levels (Protein atlas)

Not detected

Low

Medium

High

References

Pubmed ID	Year	Title	Citations
31210371	2019	FAM48A mediates compensatory autophagy induced by proteasome impairment.	0
31210371	2019	FAM48A mediates compensatory autophagy induced by proteasome impairment.	0
27531877	2016	p38 MAPK mediates epithelial-mesenchymal transition by regulating p38IP and Snail in head and neck squamous cell carcinoma.	16
27531877	2016	p38 MAPK mediates epithelial-mesenchymal transition by regulating p38IP and Snail in head and neck squamous cell carcinoma.	16
24220028	2013	The p38-interacting protein (p38IP) regulates G2/M progression by promoting α-tubulin acetylation via inhibiting ubiquitination-induced degradation of the acetyltransferase GCN5.	13
24220028	2013	The p38-interacting protein (p38IP) regulates G2/M progression by promoting α-tubulin acetylation via inhibiting ubiquitination-induced degradation of the acetyltransferase GCN5.	13
19893488	2010	Coordinated regulation of autophagy by p38alpha MAPK through mAtg9 and p38IP.	128
19893488	2010	Coordinated regulation of autophagy by p38alpha MAPK through mAtg9 and p38IP.	128
19114550	2009	The human SPT20-containing SAGA complex plays a direct role in the regulation of endoplasmic reticulum stress-induced genes.	45
19114550	2009	The human SPT20-containing SAGA complex plays a direct role in the regulation of endoplasmic reticulum stress-induced genes.	45
16685401	2006	Functional analyses of C13orf19/P38IP in prostate cell lines.	1
16685401	2006	Functional analyses of C13orf19/P38IP in prostate cell lines.	1
15978328	2005	Quantification of C13orf19/P38IP mRNA expression by quantitative real-time PCR in patients with urological malignancies.	3
15978328	2005	Quantification of C13orf19/P38IP mRNA expression by quantitative real-time PCR in patients with urological malignancies.	3
12070015	2002	Novel transcription factors in human CD34 antigen-positive hematopoietic cells.	9

Citation

Dessen P

SUPT20H (SPT20 homolog, SAGA complex component)

Atlas Genet Cytogenet Oncol Haematol. 2007-02-01

Online version: http://atlasgeneticsoncology.org/gene/46059/css/lib/teaching-explorer/js/_common.js