SLC46A1 (solute carrier family 46 member 1)

2008-12-01  

Identity

HGNC
LOCATION
17q11.2
LOCUSID
ALIAS
G21,HCP1,PCFT

Other Information

Locus ID:

NCBI: 113235
MIM: 611672
HGNC: 30521
Ensembl: ENSG00000076351

Variants:

dbSNP: 113235
ClinVar: 113235
TCGA: ENSG00000076351
COSMIC: SLC46A1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000076351ENST00000581516J3KTE6
ENSG00000076351ENST00000582735J3QL21
ENSG00000076351ENST00000584426K7EPJ7
ENSG00000076351ENST00000584995J3QRF7
ENSG00000076351ENST00000612814Q96NT5
ENSG00000076351ENST00000612814A0A024QZ15
ENSG00000076351ENST00000618626Q96NT5
ENSG00000076351ENST00000618626A0A024QZ44

Expression (GTEx)

0
5
10
15
20

Pathways

PathwaySourceExternal ID
Vitamin digestion and absorptionKEGGko04977
Vitamin digestion and absorptionKEGGhsa04977
Mineral absorptionKEGGko04978
Mineral absorptionKEGGhsa04978
Transmembrane transport of small moleculesREACTOMER-HSA-382551
Iron uptake and transportREACTOMER-HSA-917937
MetabolismREACTOMER-HSA-1430728
Metabolism of vitamins and cofactorsREACTOMER-HSA-196854
Metabolism of water-soluble vitamins and cofactorsREACTOMER-HSA-196849
Metabolism of folate and pterinesREACTOMER-HSA-196757
Antifolate resistanceKEGGko01523
Antifolate resistanceKEGGhsa01523

Protein levels (Protein atlas)

Not detected
Low
Medium
High

PharmGKB

Entity IDNameTypeEvidenceAssociationPKPDPMIDs
PA450428methotrexateChemicalPathwayassociated21317831

References

Pubmed IDYearTitleCitations
358114432022Loss of SLC46A1 decreases tumor iron content in hepatocellular carcinoma.5
358114432022Loss of SLC46A1 decreases tumor iron content in hepatocellular carcinoma.5
333873482021SLC46A1 Haplotype with Predicted Functional Impact has Prognostic Value in Breast Carcinoma.2
337376372021Folate transporter dynamics and therapy with classic and tumor-targeted antifolates.14
340402562021Structural basis of antifolate recognition and transport by PCFT.22
333873482021SLC46A1 Haplotype with Predicted Functional Impact has Prognostic Value in Breast Carcinoma.2
337376372021Folate transporter dynamics and therapy with classic and tumor-targeted antifolates.14
340402562021Structural basis of antifolate recognition and transport by PCFT.22
319264532020Decreased placental folate transporter expression and activity in first and second trimester in obese mothers.4
324939922020Impact of hypoxia on chemoresistance of mesothelioma mediated by the proton-coupled folate transporter, and preclinical activity of new anti-LDH-A compounds.12
326218202020SLC46A1 contributes to hepatic iron metabolism by importing heme in hepatocytes.8
328931902020A proton-coupled folate transporter mutation causing hereditary folate malabsorption locks the protein in an inward-open conformation.4
319264532020Decreased placental folate transporter expression and activity in first and second trimester in obese mothers.4
324939922020Impact of hypoxia on chemoresistance of mesothelioma mediated by the proton-coupled folate transporter, and preclinical activity of new anti-LDH-A compounds.12
326218202020SLC46A1 contributes to hepatic iron metabolism by importing heme in hepatocytes.8

Citation

Dessen P

SLC46A1 (solute carrier family 46 member 1)

Atlas Genet Cytogenet Oncol Haematol. 2008-12-01

Online version: http://atlasgeneticsoncology.org/gene/50593/slc46a1