COL11A1 (collagen type XI alpha 1 chain)

2009-08-01  

Identity

HGNC
COL11A1
LOCATION
1p21.1
LOCUSID
1301
ALIAS
CO11A1,COLL6,DFNA37,STL2
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 1301
MIM: 120280
HGNC: 2186
Ensembl: ENSG00000060718

Variants:

dbSNP: 1301
ClinVar: 1301
TCGA: ENSG00000060718
COSMIC: COL11A1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000060718ENST00000353414P12107
ENSG00000060718ENST00000358392P12107
ENSG00000060718ENST00000370096P12107
ENSG00000060718ENST00000427239C9JMN2
ENSG00000060718ENST00000447608H7C381
ENSG00000060718ENST00000461720A0A2R8YDU3
ENSG00000060718ENST00000512756P12107
ENSG00000060718ENST00000635193A0A0U1RRA7
ENSG00000060718ENST00000644186A0A2R8Y4I5
ENSG00000060718ENST00000645458A0A2R8Y4M5
ENSG00000060718ENST00000647280A0A2R8Y5N4

Expression (GTEx)

0
5
10
15
20
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
Protein digestion and absorptionKEGGko04974
Protein digestion and absorptionKEGGhsa04974
Extracellular matrix organizationREACTOMER-HSA-1474244
Collagen formationREACTOMER-HSA-1474290
Collagen biosynthesis and modifying enzymesREACTOMER-HSA-1650814
Assembly of collagen fibrils and other multimeric structuresREACTOMER-HSA-2022090
Collagen chain trimerizationREACTOMER-HSA-8948216

References

Pubmed IDYearTitleCitations
377832952024Collagen 1A1 (COL1A1) and Collagen11A1(COL11A1) as diagnostic biomarkers in Breast, colorectal and gastric cancers.1
382772112024Association of genetic variation in COL11A1 with adolescent idiopathic scoliosis.0
386499612024Analysis of cancer-associated fibroblasts related genes identifies COL11A1 associated with lung adenocarcinoma prognosis.0
377832952024Collagen 1A1 (COL1A1) and Collagen11A1(COL11A1) as diagnostic biomarkers in Breast, colorectal and gastric cancers.1
382772112024Association of genetic variation in COL11A1 with adolescent idiopathic scoliosis.0
386499612024Analysis of cancer-associated fibroblasts related genes identifies COL11A1 associated with lung adenocarcinoma prognosis.0
340097842023Association Between COL5a1, COL11a1, and COL11a2 Gene Variations and Rotator Cuff Tendinopathy in Young Athletes.2
367273172023Genetic associations in CHAT and COL11A1 with primary angle-closure glaucoma susceptibility: A systematic review and meta-analysis.0
368616862023COL11A1-driven positive feedback loop modulates fibroblast transformation and activates pancreatic cancer progression.1
371939422023Circular circRANGAP1 Contributes to Non-small Cell Lung Cancer Progression by Increasing COL11A1 Expression Through Sponging miR-653-5p.1
372781722023[COL11A1 regulates PI3K/Akt/GSK-3β pathway and promotes human lung adenocarcinoma primary cell migration and invasion].0
340097842023Association Between COL5a1, COL11a1, and COL11a2 Gene Variations and Rotator Cuff Tendinopathy in Young Athletes.2
367273172023Genetic associations in CHAT and COL11A1 with primary angle-closure glaucoma susceptibility: A systematic review and meta-analysis.0
368616862023COL11A1-driven positive feedback loop modulates fibroblast transformation and activates pancreatic cancer progression.1
371939422023Circular circRANGAP1 Contributes to Non-small Cell Lung Cancer Progression by Increasing COL11A1 Expression Through Sponging miR-653-5p.1

Citation

Dessen P

COL11A1 (collagen type XI alpha 1 chain)

Atlas Genet Cytogenet Oncol Haematol. 2009-08-01

Online version: http://atlasgeneticsoncology.org/gene/51004/js/lib/tumors-explorer/css/template-card.css