IRF9 (interferon regulatory factor 9)

2010-07-01  

Identity

HGNC
IRF9
LOCATION
14q12
LOCUSID
10379
ALIAS
IRF-9,ISGF3,ISGF3G,p48

Other Information

Locus ID:

NCBI: 10379
MIM: 147574
HGNC: 6131
Ensembl: ENSG00000213928

Variants:

dbSNP: 10379
ClinVar: 10379
TCGA: ENSG00000213928
COSMIC: IRF9

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000213928ENST00000324076H7BXP4
ENSG00000213928ENST00000396864Q00978
ENSG00000213928ENST00000557894H0YMB0
ENSG00000213928ENST00000559284H0YMB6
ENSG00000213928ENST00000560275H0YNP4
ENSG00000213928ENST00000560852H0YNM9
ENSG00000213928ENST00000561342H0YNM9

Expression (GTEx)

0
50
100
150
200
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
Jak-STAT signaling pathwayKEGGko04630
Jak-STAT signaling pathwayKEGGhsa04630
NOD-like receptor signaling pathwayKEGGko04621
NOD-like receptor signaling pathwayKEGGhsa04621
Hepatitis CKEGGko05160
Hepatitis CKEGGhsa05160
Osteoclast differentiationKEGGko04380
Osteoclast differentiationKEGGhsa04380
MeaslesKEGGko05162
MeaslesKEGGhsa05162
Influenza AKEGGko05164
Influenza AKEGGhsa05164
Herpes simplex infectionKEGGko05168
Herpes simplex infectionKEGGhsa05168
Viral carcinogenesisKEGGhsa05203
Viral carcinogenesisKEGGko05203
Immune SystemREACTOMER-HSA-168256
Cytokine Signaling in Immune systemREACTOMER-HSA-1280215
Interferon SignalingREACTOMER-HSA-913531
Interferon alpha/beta signalingREACTOMER-HSA-909733
Interferon gamma signalingREACTOMER-HSA-877300

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
385149032024The lack of either IRF9, or STAT2, has surprisingly little effect on human natural killer cell development and function.0
385149032024The lack of either IRF9, or STAT2, has surprisingly little effect on human natural killer cell development and function.0
366919242023Evolution and emergence of primate-specific interferon regulatory factor 9.2
371448652023Twist1-IRF9 Interaction Is Necessary for IFN-Stimulated Gene Anti-Zika Viral Infection.0
381394632023ISGF3 and STAT2/IRF9 Control Basal and IFN-Induced Transcription through Genome-Wide Binding of Phosphorylated and Unphosphorylated Complexes to Common ISRE-Containing ISGs.1
366919242023Evolution and emergence of primate-specific interferon regulatory factor 9.2
371448652023Twist1-IRF9 Interaction Is Necessary for IFN-Stimulated Gene Anti-Zika Viral Infection.0
381394632023ISGF3 and STAT2/IRF9 Control Basal and IFN-Induced Transcription through Genome-Wide Binding of Phosphorylated and Unphosphorylated Complexes to Common ISRE-Containing ISGs.1
351489982022Increased IRF9-STAT2 Signaling Leads to Adaptive Resistance toward Targeted Therapy in Melanoma by Restraining GSDME-Dependent Pyroptosis.11
351825472022Aberrant inflammatory responses to type I interferon in STAT2 or IRF9 deficiency.18
360594592022SCD2-mediated cooperative activation of IRF3-IRF9 regulatory circuit controls type I interferon transcriptome in CD4(+) T cells.0
361325462022IRF9 and XAF1 as Diagnostic Markers of Primary Sjogren Syndrome.1
363578302022Positive selection-driven fixation of a hominin-specific amino acid mutation related to dephosphorylation in IRF9.1
351489982022Increased IRF9-STAT2 Signaling Leads to Adaptive Resistance toward Targeted Therapy in Melanoma by Restraining GSDME-Dependent Pyroptosis.11
351825472022Aberrant inflammatory responses to type I interferon in STAT2 or IRF9 deficiency.18

Citation

Dessen P

IRF9 (interferon regulatory factor 9)

Atlas Genet Cytogenet Oncol Haematol. 2010-07-01

Online version: http://atlasgeneticsoncology.org/gene/51547/haematological-explorer/meetings/js/lib/zoomerang.js