NELFCD (negative elongation factor complex member C/D)

2010-10-01  

Identity

HGNC
LOCATION
20q13.32
LOCUSID
ALIAS
HSPC130,NELF-C,NELF-D,TH1,TH1L

Other Information

Locus ID:

NCBI: 51497
MIM: 605297
HGNC: 15934
Ensembl: ENSG00000101158

Variants:

dbSNP: 51497
ClinVar: 51497
TCGA: ENSG00000101158
COSMIC: NELFCD

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000101158ENST00000460601X6RLT1
ENSG00000101158ENST00000602795H0UI80
ENSG00000101158ENST00000652272Q8IXH7

Expression (GTEx)

0
50
100
150

Pathways

PathwaySourceExternal ID
DiseaseREACTOMER-HSA-1643685
Infectious diseaseREACTOMER-HSA-5663205
HIV InfectionREACTOMER-HSA-162906
HIV Life CycleREACTOMER-HSA-162587
Late Phase of HIV Life CycleREACTOMER-HSA-162599
Transcription of the HIV genomeREACTOMER-HSA-167172
HIV Transcription ElongationREACTOMER-HSA-167169
Formation of the HIV-1 Early Elongation ComplexREACTOMER-HSA-167158
Tat-mediated elongation of the HIV-1 transcriptREACTOMER-HSA-167246
Formation of HIV-1 elongation complex containing HIV-1 TatREACTOMER-HSA-167200
Abortive elongation of HIV-1 transcript in the absence of TatREACTOMER-HSA-167242
HIV elongation arrest and recoveryREACTOMER-HSA-167287
Formation of HIV elongation complex in the absence of HIV TatREACTOMER-HSA-167152
Pausing and recovery of HIV elongationREACTOMER-HSA-167290
Tat-mediated HIV elongation arrest and recoveryREACTOMER-HSA-167243
Pausing and recovery of Tat-mediated HIV elongationREACTOMER-HSA-167238
Gene ExpressionREACTOMER-HSA-74160
Generic Transcription PathwayREACTOMER-HSA-212436
Transcriptional Regulation by TP53REACTOMER-HSA-3700989
RNA Polymerase II TranscriptionREACTOMER-HSA-73857
RNA Polymerase II Pre-transcription EventsREACTOMER-HSA-674695
RNA Polymerase II Transcription ElongationREACTOMER-HSA-75955
Formation of the Early Elongation ComplexREACTOMER-HSA-113418
Formation of RNA Pol II elongation complexREACTOMER-HSA-112382
TP53 Regulates Transcription of DNA Repair GenesREACTOMER-HSA-6796648

PharmGKB

Entity IDNameTypeEvidenceAssociationPKPDPMIDs
PA151249535diureticsChemicalClinicalAnnotationassociatedPD
PA164713347Thiazides, plainChemicalClinicalAnnotationassociatedPD
PA444552HypertensionDiseaseClinicalAnnotationassociatedPD
PA449899hydrochlorothiazideChemicalClinicalAnnotationassociatedPD

References

Pubmed IDYearTitleCitations
388099182024TH1L involvement in colorectal cancer pathogenesis by regulation of CCL20 through the NF-κB signalling pathway.1
388099182024TH1L involvement in colorectal cancer pathogenesis by regulation of CCL20 through the NF-κB signalling pathway.1
375911842023Structural basis of the human negative elongation factor NELF-B/C/E ternary complex.1
375911842023Structural basis of the human negative elongation factor NELF-B/C/E ternary complex.1
297953042018NELFCD and CTSZ loci are associated with jaundice-stage progression in primary biliary cholangitis in the Japanese population.7
297953042018NELFCD and CTSZ loci are associated with jaundice-stage progression in primary biliary cholangitis in the Japanese population.7
272823912016Architecture and RNA binding of the human negative elongation factor.38
272823912016Architecture and RNA binding of the human negative elongation factor.38
222386752012Trihydrophobin 1 phosphorylation by c-Src regulates MAPK/ERK signaling and cell migration.4
222386752012Trihydrophobin 1 phosphorylation by c-Src regulates MAPK/ERK signaling and cell migration.4
200289842010Human negative elongation factor activates transcription and regulates alternative transcription initiation.31
200695632010Trihydrophobin 1 attenuates androgen signal transduction through promoting androgen receptor degradation.5
207354312010Negative role of trihydrophobin 1 in breast cancer growth and migration.5
200289842010Human negative elongation factor activates transcription and regulates alternative transcription initiation.31
200695632010Trihydrophobin 1 attenuates androgen signal transduction through promoting androgen receptor degradation.5

Citation

Dessen P

NELFCD (negative elongation factor complex member C/D)

Atlas Genet Cytogenet Oncol Haematol. 2010-10-01

Online version: http://atlasgeneticsoncology.org/gene/51720/nelfcd