MSX1 (msh homeobox 1)

2010-12-01  

Identity

HGNC
MSX1
LOCATION
4p16.2
LOCUSID
4487
ALIAS
ECTD3,HOX7,HYD1,STHAG1
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 4487
MIM: 142983
HGNC: 7391
Ensembl: ENSG00000163132

Variants:

dbSNP: 4487
ClinVar: 4487
TCGA: ENSG00000163132
COSMIC: MSX1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000163132ENST00000382723P28360

Expression (GTEx)

0
50
100
150
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
HTLV-I infectionKEGGko05166
HTLV-I infectionKEGGhsa05166

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
380695512024Characterization of novel MSX1 variants causally associated with non-syndromic oligodontia in Chinese families.1
382268152024Intrahepatic homeobox protein MSX-1 is a novel host restriction factor of hepatitis B virus.1
387131172024Orodental malformations associated with human MSX1 sequence variants.0
380695512024Characterization of novel MSX1 variants causally associated with non-syndromic oligodontia in Chinese families.1
382268152024Intrahepatic homeobox protein MSX-1 is a novel host restriction factor of hepatitis B virus.1
387131172024Orodental malformations associated with human MSX1 sequence variants.0
364785002023MSX1 involved selective tooth agenesis and abnormal labial frenum, pedigree, and retrospective study.0
371012232023MSX1-expression during the different phases in healthy human endometrium.1
364785002023MSX1 involved selective tooth agenesis and abnormal labial frenum, pedigree, and retrospective study.0
371012232023MSX1-expression during the different phases in healthy human endometrium.1
350656352022Family and case-control genetic study of MSX1 polymorphisms in peg-shaped teeth Jordanian population.1
351692232022Hypermethylation of PDX1, EN2, and MSX1 predicts the prognosis of colorectal cancer.9
351733092022LINC01021 maintains tumorigenicity by enhancing N6-methyladenosine reader IMP2 dependent stabilization of MSX1 and JARID2: implication in colorectal cancer.12
350656352022Family and case-control genetic study of MSX1 polymorphisms in peg-shaped teeth Jordanian population.1
351692232022Hypermethylation of PDX1, EN2, and MSX1 predicts the prognosis of colorectal cancer.9

Citation

Dessen P

MSX1 (msh homeobox 1)

Atlas Genet Cytogenet Oncol Haematol. 2010-12-01

Online version: http://atlasgeneticsoncology.org/gene/51797