NCF4 (neutrophil cytosolic factor 4)

2011-08-01  

Identity

HGNC
LOCATION
22q12.3
LOCUSID
ALIAS
CGD3,NCF,P40PHOX,SH3PXD4
FUSION GENES

Other Information

Locus ID:

NCBI: 4689
MIM: 601488
HGNC: 7662
Ensembl: ENSG00000100365

Variants:

dbSNP: 4689
ClinVar: 4689
TCGA: ENSG00000100365
COSMIC: NCF4

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000100365ENST00000248899Q15080
ENSG00000100365ENST00000397147Q15080
ENSG00000100365ENST00000447071B0QY04
ENSG00000100365ENST00000650698A0A494BZS1
ENSG00000100365ENST00000650827A0A494BZS1

Expression (GTEx)

0
100
200
300
400
500
600

Pathways

PathwaySourceExternal ID
Leukocyte transendothelial migrationKEGGko04670
Leukocyte transendothelial migrationKEGGhsa04670
LeishmaniasisKEGGko05140
LeishmaniasisKEGGhsa05140
PhagosomeKEGGko04145
PhagosomeKEGGhsa04145
Osteoclast differentiationKEGGko04380
Osteoclast differentiationKEGGhsa04380
ROS, RNS production in phagocytesREACTOMER-HSA-1222556
Immune SystemREACTOMER-HSA-168256
Adaptive Immune SystemREACTOMER-HSA-1280218
Class I MHC mediated antigen processing & presentationREACTOMER-HSA-983169
Antigen processing-Cross presentationREACTOMER-HSA-1236975
Cross-presentation of particulate exogenous antigens (phagosomes)REACTOMER-HSA-1236973
Innate Immune SystemREACTOMER-HSA-168249
Signal TransductionREACTOMER-HSA-162582
Signaling by VEGFREACTOMER-HSA-194138
VEGFA-VEGFR2 PathwayREACTOMER-HSA-4420097
Signaling by Rho GTPasesREACTOMER-HSA-194315
RHO GTPase EffectorsREACTOMER-HSA-195258
RHO GTPases Activate NADPH OxidasesREACTOMER-HSA-5668599
Cellular responses to stressREACTOMER-HSA-2262752
Detoxification of Reactive Oxygen SpeciesREACTOMER-HSA-3299685

Protein levels (Protein atlas)

Not detected
Low
Medium
High

PharmGKB

Entity IDNameTypeEvidenceAssociationPKPDPMIDs
PA444760Leukemia, Myeloid, AcuteDiseaseClinicalAnnotationassociatedPD28485375
PA445062NeoplasmsDiseaseClinicalAnnotationassociatedPD16330681, 19448608, 26799497, 28485375, 28763429
PA446108Colorectal NeoplasmsDiseaseVariantAnnotationnot associatedPD
PA448497aspirinChemicalVariantAnnotationnot associatedPD
PA449412doxorubicinChemicalClinicalAnnotation, PathwayassociatedPD16330681, 19448608, 21048526, 26799497, 28485375, 28763429
PA449961idarubicinChemicalClinicalAnnotationassociatedPD16330681, 19448608, 26799497, 28485375, 28763429

References

Pubmed IDYearTitleCitations
388863412024NCF4 attenuates colorectal cancer progression by modulating inflammasome activation and immune surveillance.0
388863412024NCF4 attenuates colorectal cancer progression by modulating inflammasome activation and immune surveillance.0
380853962023Polymorphisms of the NCF4 Gene Increase the Risk of Chronic Heart Failure in Patients with Type 2 Diabetes Mellitus.0
380853962023Polymorphisms of the NCF4 Gene Increase the Risk of Chronic Heart Failure in Patients with Type 2 Diabetes Mellitus.0
347081242021NCF1/2/4 Are Prognostic Biomarkers Related to the Immune Infiltration of Kidney Renal Clear Cell Carcinoma.10
347081242021NCF1/2/4 Are Prognostic Biomarkers Related to the Immune Infiltration of Kidney Renal Clear Cell Carcinoma.10
331453642020Association of NCF2, NCF4, and CYBA Gene Polymorphisms with Rheumatoid Arthritis in a Chinese Population.4
331453642020Association of NCF2, NCF4, and CYBA Gene Polymorphisms with Rheumatoid Arthritis in a Chinese Population.4
293111512018Tks adaptor proteins at a glance.22
299694372018Inherited p40phox deficiency differs from classic chronic granulomatous disease.43
293111512018Tks adaptor proteins at a glance.22
299694372018Inherited p40phox deficiency differs from classic chronic granulomatous disease.43
280963012017Phosphoinositol 3-phosphate acts as a timer for reactive oxygen species production in the phagosome.7
280963012017Phosphoinositol 3-phosphate acts as a timer for reactive oxygen species production in the phagosome.7
262890932015Association between NCF4 rs4821544T/C polymorphism and inflammatory bowel disease risk in Caucasian: a meta-analysis.4

Citation

Dessen P

NCF4 (neutrophil cytosolic factor 4)

Atlas Genet Cytogenet Oncol Haematol. 2011-08-01

Online version: http://atlasgeneticsoncology.org/gene/52301/ncf4