SWI5 (SWI5 homologous recombination repair protein)

2011-08-01  

Identity

HGNC
SWI5
LOCATION
9q34.11
LOCUSID
375757
ALIAS
C9orf119,SAE3
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 375757
MIM: 616528
HGNC: 31412
Ensembl: ENSG00000175854

Variants:

dbSNP: 375757
ClinVar: 375757
TCGA: ENSG00000175854
COSMIC: SWI5

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000175854ENST00000320188Q1ZZU3
ENSG00000175854ENST00000372898H3BLW9
ENSG00000175854ENST00000418976H7C3F2
ENSG00000175854ENST00000419867V9GZ11
ENSG00000175854ENST00000495313H7C5E9
ENSG00000175854ENST00000608796V9GYD7
ENSG00000175854ENST00000652598A0A494C0Z4

Expression (GTEx)

0
50
100
150
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
272654692016Downregulation of SWI5 and CTC1 genes: hepatitis B virus DNA polymerase transactivated protein 1-mediated inhibition of DNA repair.0
272654692016Downregulation of SWI5 and CTC1 genes: hepatitis B virus DNA polymerase transactivated protein 1-mediated inhibition of DNA repair.0
212522232011The role of the human SWI5-MEI5 complex in homologous recombination repair.23
212522232011The role of the human SWI5-MEI5 complex in homologous recombination repair.23

Citation

Dessen P

SWI5 (SWI5 homologous recombination repair protein)

Atlas Genet Cytogenet Oncol Haematol. 2011-08-01

Online version: http://atlasgeneticsoncology.org/gene/52315/swi5