CLEC11A (C-type lectin domain containing 11A)

2012-01-01  

Identity

HGNC
CLEC11A
LOCATION
19q13.33
LOCUSID
6320
ALIAS
CLECSF3,LSLCL,P47,SCGF

Other Information

Locus ID:

NCBI: 6320
MIM: 604713
HGNC: 10576
Ensembl: ENSG00000105472

Variants:

dbSNP: 6320
ClinVar: 6320
TCGA: ENSG00000105472
COSMIC: CLEC11A

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000105472ENST00000250340Q9Y240
ENSG00000105472ENST00000599973M0R081
ENSG00000105472ENST00000617718V9H0X6

Expression (GTEx)

0
50
100
150
200
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
383480522024Identification and characterization of CLEC11A and its derived immune signature in gastric cancer.1
384667062024CLEC11A methylation is correlated to AML subtypes and cytogenetic risk factors but not patient demographics.0
383480522024Identification and characterization of CLEC11A and its derived immune signature in gastric cancer.1
384667062024CLEC11A methylation is correlated to AML subtypes and cytogenetic risk factors but not patient demographics.0
341404102021The effect of parathyroid hormone on osteogenesis is mediated partly by osteolectin.12
341404102021The effect of parathyroid hormone on osteogenesis is mediated partly by osteolectin.12
279769992016Clec11a/osteolectin is an osteogenic growth factor that promotes the maintenance of the adult skeleton.55
279769992016Clec11a/osteolectin is an osteogenic growth factor that promotes the maintenance of the adult skeleton.55
264405922015Exploratory study for identifying systemic biomarkers that correlate with pain response in patients with intervertebral disc disorders.30
265640032015Elevated levels of endothelial-derived microparticles, and serum CXCL9 and SCGF-β are associated with unstable asymptomatic carotid plaques.21
264405922015Exploratory study for identifying systemic biomarkers that correlate with pain response in patients with intervertebral disc disorders.30
265640032015Elevated levels of endothelial-derived microparticles, and serum CXCL9 and SCGF-β are associated with unstable asymptomatic carotid plaques.21
233573022013Prognostic value of circulating levels of stem cell growth factor beta (SCGF beta) in patients with Chagas' disease and idiopathic dilated cardiomyopathy.6
233573022013Prognostic value of circulating levels of stem cell growth factor beta (SCGF beta) in patients with Chagas' disease and idiopathic dilated cardiomyopathy.6
219431292011Proteomic detection of a large amount of SCGFα in the stroma of GISTs after imatinib therapy.6

Citation

Dessen P

CLEC11A (C-type lectin domain containing 11A)

Atlas Genet Cytogenet Oncol Haematol. 2012-01-01

Online version: http://atlasgeneticsoncology.org/gene/52572/js/css/lib/gene-fusions-explorer/