LFNG (LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase)

2012-08-01  

Identity

HGNC
LOCATION
7p22.3
LOCUSID
ALIAS
SCDO3
FUSION GENES

Other Information

Locus ID:

NCBI: 3955
MIM: 602576
HGNC: 6560
Ensembl: ENSG00000106003

Variants:

dbSNP: 3955
ClinVar: 3955
TCGA: ENSG00000106003
COSMIC: LFNG

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000106003ENST00000222725Q8NES3
ENSG00000106003ENST00000338732Q8NES3
ENSG00000106003ENST00000359574Q8NES3
ENSG00000106003ENST00000402045Q8NES3
ENSG00000106003ENST00000402506Q8NES3
ENSG00000106003ENST00000614382A0A087X191

Expression (GTEx)

0
5
10
15
20
25
30
35
40
45

Pathways

PathwaySourceExternal ID
Other types of O-glycan biosynthesisKEGGko00514
Notch signaling pathwayKEGGko04330
Other types of O-glycan biosynthesisKEGGhsa00514
Notch signaling pathwayKEGGhsa04330
Signal TransductionREACTOMER-HSA-162582
Signaling by NOTCHREACTOMER-HSA-157118
Pre-NOTCH Expression and ProcessingREACTOMER-HSA-1912422
Pre-NOTCH Processing in GolgiREACTOMER-HSA-1912420

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
370380482023Identification of bi-allelic LFNG variants in three patients and further clinical and molecular refinement of spondylocostal dysostosis 3.0
370380482023Identification of bi-allelic LFNG variants in three patients and further clinical and molecular refinement of spondylocostal dysostosis 3.0
335624102021Bioinformatics and Functional Analyses Implicate Potential Roles for EOGT and L-fringe in Pancreatic Cancers.7
338944182021Lunatic fringe promotes the aggregation of CADASIL NOTCH3 mutant proteins.1
335624102021Bioinformatics and Functional Analyses Implicate Potential Roles for EOGT and L-fringe in Pancreatic Cancers.7
338944182021Lunatic fringe promotes the aggregation of CADASIL NOTCH3 mutant proteins.1
305318072019Identification of novel LFNG mutations in spondylocostal dysostosis.4
305318072019Identification of novel LFNG mutations in spondylocostal dysostosis.4
291936072018Comparative genomics reveals that loss of lunatic fringe (LFNG) promotes melanoma metastasis.13
291936072018Comparative genomics reveals that loss of lunatic fringe (LFNG) promotes melanoma metastasis.13
289381592017Lunatic Fringe and p53 Cooperatively Suppress Mesenchymal Stem-Like Breast Cancer.8
289381592017Lunatic Fringe and p53 Cooperatively Suppress Mesenchymal Stem-Like Breast Cancer.8
262793022016Lunatic Fringe is a potent tumor suppressor in Kras-initiated pancreatic cancer.19
271568402016Reconstitution of TGFBR2 in HCT116 colorectal cancer cells causes increased LFNG expression and enhanced N-acetyl-d-glucosamine incorporation into Notch1.8
262793022016Lunatic Fringe is a potent tumor suppressor in Kras-initiated pancreatic cancer.19

Citation

Dessen P

LFNG (LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase)

Atlas Genet Cytogenet Oncol Haematol. 2012-08-01

Online version: http://atlasgeneticsoncology.org/gene/52840/lfng