NTM (neurotrimin)

2013-03-01  

Identity

HGNC
NTM
LOCATION
11q25
LOCUSID
50863
ALIAS
CEPU-1,HNT,IGLON2,NTRI
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 50863
MIM: 607938
HGNC: 17941
Ensembl: ENSG00000182667

Variants:

dbSNP: 50863
ClinVar: 50863
TCGA: ENSG00000182667
COSMIC: NTM

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000182667ENST00000374784Q9P121
ENSG00000182667ENST00000374786Q9P121
ENSG00000182667ENST00000374791Q9P121
ENSG00000182667ENST00000416661C9J0V2
ENSG00000182667ENST00000425719Q9P121
ENSG00000182667ENST00000427481F8W8Y1
ENSG00000182667ENST00000436745C9JK95
ENSG00000182667ENST00000457381H7BZ62
ENSG00000182667ENST00000539799F6WFR7
ENSG00000182667ENST00000550167F8VTR5

Expression (GTEx)

0
10
20
30
40
50
60
70
80
90
100
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
Metabolism of proteinsREACTOMER-HSA-392499
Post-translational protein modificationREACTOMER-HSA-597592
Post-translational modification: synthesis of GPI-anchored proteinsREACTOMER-HSA-163125

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
320337182020Steroid hormones and hormone antagonists regulate the neural marker neurotrimin in uterine leiomyoma.2
327109822020Highly Conserved Molecular Features in IgLONs Contrast Their Distinct Structural and Biological Outcomes.9
320337182020Steroid hormones and hormone antagonists regulate the neural marker neurotrimin in uterine leiomyoma.2
327109822020Highly Conserved Molecular Features in IgLONs Contrast Their Distinct Structural and Biological Outcomes.9
258190872015Genome-wide linkage and positional association analyses identify associations of novel AFF3 and NTM genes with triglycerides: the GenSalt study.7
26334118201511q24.2-25 micro-rearrangements in autism spectrum disorders: Relation to brain structures.10
258190872015Genome-wide linkage and positional association analyses identify associations of novel AFF3 and NTM genes with triglycerides: the GenSalt study.7
26334118201511q24.2-25 micro-rearrangements in autism spectrum disorders: Relation to brain structures.10
246162872014Gene-targeted deletion of OPCML and Neurotrimin in mice does not yield congenital heart defects.3
246162872014Gene-targeted deletion of OPCML and Neurotrimin in mice does not yield congenital heart defects.3
226614862012Genome-wide analysis of central corneal thickness in primary open-angle glaucoma cases in the NEIGHBOR and GLAUGEN consortia.28
230542442012A balanced translocation truncates Neurotrimin in a family with intracranial and thoracic aortic aneurysm.11
226614862012Genome-wide analysis of central corneal thickness in primary open-angle glaucoma cases in the NEIGHBOR and GLAUGEN consortia.28
230542442012A balanced translocation truncates Neurotrimin in a family with intracranial and thoracic aortic aneurysm.11
210361972011NTM and NR3C2 polymorphisms influencing intelligence: family-based association studies.21

Citation

Dessen P

NTM (neurotrimin)

Atlas Genet Cytogenet Oncol Haematol. 2013-03-01

Online version: http://atlasgeneticsoncology.org/gene/53234/cancer-prone-explorer/favicon/teaching-explorer/