SPATA16 (spermatogenesis associated 16)

2014-08-01 Affiliation

Identity

HGNC

SPATA16

LOCATION

3q26.31

LOCUSID

83893

ALIAS

NYD-SP12,SPGF6

FUSION GENES

Show Gene Fusions

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 83893
MIM: 609856
HGNC: 29935
Ensembl: ENSG00000144962

Variants:

dbSNP: 83893
ClinVar: 83893
TCGA: ENSG00000144962
COSMIC: SPATA16

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000144962	ENST00000351008	Q9BXB7
ENSG00000144962	ENST00000351008	A0A140VJV8
ENSG00000144962	ENST00000652082	A0A494BZR9

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

Protein levels (Protein atlas)

Not detected

Low

Medium

High

References

Pubmed ID	Year	Title	Citations
35248021	2022	Association of CATSPER1, SPATA16 and TEX11 genes polymorphism with idiopathic azoospermia and oligospermia risk in Iranian population.	2
36177775	2022	SPATA16 promoter hypermethylation and downregulation in male infertility.	0
35248021	2022	Association of CATSPER1, SPATA16 and TEX11 genes polymorphism with idiopathic azoospermia and oligospermia risk in Iranian population.	2
36177775	2022	SPATA16 promoter hypermethylation and downregulation in male infertility.	0
30912172	2019	Comparison of sperm morphology and nuclear sperm quality in SPATA16- and DPY19L2-mutated globozoospermic patients.	7
30912172	2019	Comparison of sperm morphology and nuclear sperm quality in SPATA16- and DPY19L2-mutated globozoospermic patients.	7
29065458	2017	Human Globozoospermia-Related Gene Spata16 Is Required for Sperm Formation Revealed by CRISPR/Cas9-Mediated Mouse Models.	27
29065458	2017	Human Globozoospermia-Related Gene Spata16 Is Required for Sperm Formation Revealed by CRISPR/Cas9-Mediated Mouse Models.	27
27086357	2016	A new mutation identified in SPATA16 in two globozoospermic patients.	21
27086357	2016	A new mutation identified in SPATA16 in two globozoospermic patients.	21
24825417	2014	First successful pregnancy in a globozoospermic patient having homozygous mutation in SPATA16.	8
24825417	2014	First successful pregnancy in a globozoospermic patient having homozygous mutation in SPATA16.	8
20379614	2010	Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.	78
20379614	2010	Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.	78
17665087	2007	Rapid evolution, genetic variations, and functional association of the human spermatogenesis-related gene NYD-SP12.	5

Citation

Dessen P

SPATA16 (spermatogenesis associated 16)

Atlas Genet Cytogenet Oncol Haematol. 2014-08-01

Online version: http://atlasgeneticsoncology.org/gene/54657/teaching-explorer/img/img/logo-atlas-4.svg