SYBU (syntabulin)

2014-08-01  

Identity

HGNC
SYBU
LOCATION
8q23.2
LOCUSID
55638
ALIAS
GOLSYN,OCSYN,SNPHL
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 55638
MIM: 611568
HGNC: 26011
Ensembl: ENSG00000147642

Variants:

dbSNP: 55638
ClinVar: 55638
TCGA: ENSG00000147642
COSMIC: SYBU

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000147642ENST00000276646Q9NX95
ENSG00000147642ENST00000399066Q9NX95
ENSG00000147642ENST00000408889Q9NX95
ENSG00000147642ENST00000408908Q9NX95
ENSG00000147642ENST00000422135Q9NX95
ENSG00000147642ENST00000424158A0A0C4DG86
ENSG00000147642ENST00000433638Q9NX95
ENSG00000147642ENST00000440310Q9NX95
ENSG00000147642ENST00000446070Q9NX95
ENSG00000147642ENST00000524720E9PLB9
ENSG00000147642ENST00000526302E9PJ11
ENSG00000147642ENST00000527600E9PPC2
ENSG00000147642ENST00000528045E9PQG2
ENSG00000147642ENST00000528331Q9NX95
ENSG00000147642ENST00000528569E9PPS4
ENSG00000147642ENST00000528647Q9NX95
ENSG00000147642ENST00000528716E9PI48
ENSG00000147642ENST00000529175B3KRD1
ENSG00000147642ENST00000529190E9PNN9
ENSG00000147642ENST00000529690B7Z4D2
ENSG00000147642ENST00000530841E9PK96
ENSG00000147642ENST00000531230E9PRT7
ENSG00000147642ENST00000532189E9PPS4
ENSG00000147642ENST00000532594E9PQE2
ENSG00000147642ENST00000532779Q9NX95
ENSG00000147642ENST00000533065Q9NX95
ENSG00000147642ENST00000533171Q9NX95
ENSG00000147642ENST00000533394E9PL50
ENSG00000147642ENST00000533821E9PL66
ENSG00000147642ENST00000533895Q9NX95
ENSG00000147642ENST00000534184E9PRH8
ENSG00000147642ENST00000534501E9PN31
ENSG00000147642ENST00000534578E9PJ11

Expression (GTEx)

0
10
20
30
40
50
60
70
80
90
100
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
268682902016Syntabulin regulates the trafficking of PICK1-containing vesicles in neurons.7
268682902016Syntabulin regulates the trafficking of PICK1-containing vesicles in neurons.7
229753102012The microtubule associated protein syntabulin is required for glucose-stimulated and cAMP-potentiated insulin secretion.11
229753102012The microtubule associated protein syntabulin is required for glucose-stimulated and cAMP-potentiated insulin secretion.11
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.78
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.78
167508812006Expression of m-Golsyn/Syntabulin gene during mouse brain development.2
167508812006Expression of m-Golsyn/Syntabulin gene during mouse brain development.2

Citation

Dessen P

SYBU (syntabulin)

Atlas Genet Cytogenet Oncol Haematol. 2014-08-01

Online version: http://atlasgeneticsoncology.org/gene/54680/gene-fusions/meetings/deep-insight-explorer/