CSDE1 (cold shock domain containing E1)

2016-01-01  

Identity

HGNC
CSDE1
LOCATION
1p13.2
LOCUSID
7812
ALIAS
D1S155E,UNR
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 7812
MIM: 191510
HGNC: 29905
Ensembl: ENSG00000009307

Variants:

dbSNP: 7812
ClinVar: 7812
TCGA: ENSG00000009307
COSMIC: CSDE1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000009307ENST00000261443O75534
ENSG00000009307ENST00000261443A0A024R0K2
ENSG00000009307ENST00000339438O75534
ENSG00000009307ENST00000339438A0A024R0K2
ENSG00000009307ENST00000358528O75534
ENSG00000009307ENST00000358528A0A024R0E2
ENSG00000009307ENST00000369530O75534
ENSG00000009307ENST00000438362O75534
ENSG00000009307ENST00000525132E9PJK7
ENSG00000009307ENST00000525878E9PKN4
ENSG00000009307ENST00000525970A0A1Y8EMC9
ENSG00000009307ENST00000529046E9PNG3
ENSG00000009307ENST00000530886E9PLT0
ENSG00000009307ENST00000534389E9PLD4
ENSG00000009307ENST00000534699O75534
ENSG00000009307ENST00000534699A0A024R0E2
ENSG00000009307ENST00000610726O75534

Expression (GTEx)

0
100
200
300
400
500
600
700
800
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
374936042023CSDE1 promotes miR-451 biogenesis.2
374936042023CSDE1 promotes miR-451 biogenesis.2
350210762022Coordinated post-transcriptional control of oncogene-induced senescence by UNR/CSDE1.9
354902082022Reduced miR-371b-5p expression drives tumor progression via CSDE1/RAC1 regulation in triple-negative breast cancer.4
361035162022Cold shock domain-containing protein E1 is a posttranscriptional regulator of the LDL receptor.7
350210762022Coordinated post-transcriptional control of oncogene-induced senescence by UNR/CSDE1.9
354902082022Reduced miR-371b-5p expression drives tumor progression via CSDE1/RAC1 regulation in triple-negative breast cancer.4
361035162022Cold shock domain-containing protein E1 is a posttranscriptional regulator of the LDL receptor.7
336620352021The CDT of Helicobacter hepaticus induces pro-survival autophagy and nucleoplasmic reticulum formation concentrating the RNA binding proteins UNR/CSDE1 and P62/SQSTM1.3
337720272021Oncolytic virotherapy induced CSDE1 neo-antigenesis restricts VSV replication but can be targeted by immunotherapy.6
338333982021CSDE1 attenuates microRNA-mediated silencing of PMEPA1 in melanoma.9
336620352021The CDT of Helicobacter hepaticus induces pro-survival autophagy and nucleoplasmic reticulum formation concentrating the RNA binding proteins UNR/CSDE1 and P62/SQSTM1.3
337720272021Oncolytic virotherapy induced CSDE1 neo-antigenesis restricts VSV replication but can be targeted by immunotherapy.6
338333982021CSDE1 attenuates microRNA-mediated silencing of PMEPA1 in melanoma.9
319870482020The role of CSDE1 in translational reprogramming and human diseases.30

Citation

Dessen P

CSDE1 (cold shock domain containing E1)

Atlas Genet Cytogenet Oncol Haematol. 2016-01-01

Online version: http://atlasgeneticsoncology.org/gene/55574