SNAPIN (SNAP associated protein)

2016-10-01 Affiliation

Identity

HGNC

SNAPIN

LOCATION

1q21.3

LOCUSID

23557

ALIAS

BLOC1S7,BLOS7,BORCS3,SNAPAP

FUSION GENES

Show Gene Fusions

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 23557
MIM: 607007
HGNC: 17145
Ensembl: ENSG00000143553

Variants:

dbSNP: 23557
ClinVar: 23557
TCGA: ENSG00000143553
COSMIC: SNAPIN

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000143553	ENST00000368685	O95295

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

Pathways

Pathway	Source	External ID
Vesicle-mediated transport	REACTOME	R-HSA-5653656
Membrane Trafficking	REACTOME	R-HSA-199991
trans-Golgi Network Vesicle Budding	REACTOME	R-HSA-199992
Clathrin derived vesicle budding	REACTOME	R-HSA-421837
Golgi Associated Vesicle Biogenesis	REACTOME	R-HSA-432722

Protein levels (Protein atlas)

Not detected

Low

Medium

High

References

Pubmed ID	Year	Title	Citations
34194388	2021	SNAPIN Regulates Cell Cycle Progression to Promote Pancreatic β Cell Growth.	4
34681928	2021	Snapin Specifically Up-Regulates Ca(v)1.3 Ca(2+) Channel Variant with a Long Carboxyl Terminus.	1
34194388	2021	SNAPIN Regulates Cell Cycle Progression to Promote Pancreatic β Cell Growth.	4
34681928	2021	Snapin Specifically Up-Regulates Ca(v)1.3 Ca(2+) Channel Variant with a Long Carboxyl Terminus.	1
27915047	2017	Physical and functional interaction of Snapin with Cav1.3 calcium channel impacts channel protein trafficking in atrial myocytes.	7
27929705	2017	SNAPIN is critical for lysosomal acidification and autophagosome maturation in macrophages.	18
28923824	2017	Snapin promotes HIV-1 transmission from dendritic cells by dampening TLR8 signaling.	10
27915047	2017	Physical and functional interaction of Snapin with Cav1.3 calcium channel impacts channel protein trafficking in atrial myocytes.	7
27929705	2017	SNAPIN is critical for lysosomal acidification and autophagosome maturation in macrophages.	18
28923824	2017	Snapin promotes HIV-1 transmission from dendritic cells by dampening TLR8 signaling.	10
26687946	2016	Snapin interacts with G-protein coupled receptor PKR2.	3
27240978	2016	Host protein Snapin interacts with human cytomegalovirus pUL130 and affects viral DNA replication.	5
26687946	2016	Snapin interacts with G-protein coupled receptor PKR2.	3
27240978	2016	Host protein Snapin interacts with human cytomegalovirus pUL130 and affects viral DNA replication.	5
24751478	2014	Chlamydia psittaci inclusion membrane protein IncB associates with host protein Snapin.	11

Citation

Dessen P

SNAPIN (SNAP associated protein)

Atlas Genet Cytogenet Oncol Haematol. 2016-10-01

Online version: http://atlasgeneticsoncology.org/gene/56558/case-report-explorer/favicon/css/lib/dataTables.bootstrap.min.css