ZNF839 (zinc finger protein 839)

2017-08-01  

Identity

HGNC
ZNF839
LOCATION
14q32.31
LOCUSID
55778
ALIAS
C14orf131

Other Information

Locus ID:

NCBI: 55778
HGNC: 20345
Ensembl: ENSG00000022976

Variants:

dbSNP: 55778
ClinVar: 55778
TCGA: ENSG00000022976
COSMIC: ZNF839

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000022976ENST00000442396A8K0R7
ENSG00000022976ENST00000558462H0YNU6
ENSG00000022976ENST00000558490H0YKI3
ENSG00000022976ENST00000558850A8K0R7
ENSG00000022976ENST00000559098H0YM94
ENSG00000022976ENST00000559155H0YM06
ENSG00000022976ENST00000559185A8K0R7
ENSG00000022976ENST00000560112H0YMU1
ENSG00000022976ENST00000560568H0YKY1
ENSG00000022976ENST00000561251H0YLB6

Expression (GTEx)

0
5
10
15
20
25
30
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
Gene ExpressionREACTOMER-HSA-74160
Generic Transcription PathwayREACTOMER-HSA-212436

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
281383092017Polymorphisms in MicroRNA Binding Sites Predict Colorectal Cancer Survival.5
281383092017Polymorphisms in MicroRNA Binding Sites Predict Colorectal Cancer Survival.5

Citation

Dessen P

ZNF839 (zinc finger protein 839)

Atlas Genet Cytogenet Oncol Haematol. 2017-08-01

Online version: http://atlasgeneticsoncology.org/gene/56920/favicon/gene-fusions-explorer/