ZNF404 (zinc finger protein 404)

2017-10-01  

Identity

HGNC
ZNF404
LOCATION
19q13.31
LOCUSID
342908
ALIAS
-

Other Information

Locus ID:

NCBI: 342908
HGNC: 19417
Ensembl: ENSG00000176222

Variants:

dbSNP: 342908
ClinVar: 342908
TCGA: ENSG00000176222
COSMIC: ZNF404

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000176222ENST00000324394A0A087WSV7
ENSG00000176222ENST00000587539Q494X3

Expression (GTEx)

0
5
10
15
20
25
30
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
N/A

References

Pubmed IDYearTitleCitations
284223182017Computational Analysis of Breast Cancer GWAS Loci Identifies the Putative Deleterious Effect of STXBP4 and ZNF404 Gene Variants.7
289573212017Identification of breast cancer associated variants that modulate transcription factor binding.25
284223182017Computational Analysis of Breast Cancer GWAS Loci Identifies the Putative Deleterious Effect of STXBP4 and ZNF404 Gene Variants.7
289573212017Identification of breast cancer associated variants that modulate transcription factor binding.25

Citation

Dessen P

ZNF404 (zinc finger protein 404)

Atlas Genet Cytogenet Oncol Haematol. 2017-10-01

Online version: http://atlasgeneticsoncology.org/gene/57171