CLIP4 (CAP-Gly domain containing linker protein family member 4)

2018-02-01  

Identity

HGNC
CLIP4
LOCATION
2p23.2
LOCUSID
79745
ALIAS
RSNL2
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 79745
HGNC: 26108
Ensembl: ENSG00000115295

Variants:

dbSNP: 79745
ClinVar: 79745
TCGA: ENSG00000115295
COSMIC: CLIP4

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000115295ENST00000320081Q8N3C7
ENSG00000115295ENST00000401605Q8N3C7
ENSG00000115295ENST00000401617B5MCH3
ENSG00000115295ENST00000404424Q8N3C7
ENSG00000115295ENST00000415891G3XAK3
ENSG00000115295ENST00000438819C9IYE4
ENSG00000115295ENST00000449202E7EW06
ENSG00000115295ENST00000456385E9PBB1

Expression (GTEx)

0
5
10
15
20
25
30
35
40
45
50
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
272834912016FOXC2 and CLIP4 : a potential biomarker for synchronous metastasis of ≤7-cm clear cell renal cell carcinomas.17
272834912016FOXC2 and CLIP4 : a potential biomarker for synchronous metastasis of ≤7-cm clear cell renal cell carcinomas.17

Citation

Dessen P

CLIP4 (CAP-Gly domain containing linker protein family member 4)

Atlas Genet Cytogenet Oncol Haematol. 2018-02-01

Online version: http://atlasgeneticsoncology.org/gene/57305/js/gene-fusions-explorer/gene-explorer/